RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 EFCAB6Q5THR3 1501 aa19.76■□□□□ 0.75
PTBP1-203ENST00000356948 FAM161AQ3B820 660 aa19.76■□□□□ 0.75
PTBP1-203ENST00000356948 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
PTBP1-203ENST00000356948 NPC1L1Q9UHC9 1359 aa19.76■□□□□ 0.75
PTBP1-203ENST00000356948 TSR2Q969E8 191 aaKnown RBP19.74■□□□□ 0.75
PTBP1-203ENST00000356948 PCDHB15Q9Y5E8 787 aa19.74■□□□□ 0.75
PTBP1-203ENST00000356948 KIF1BO60333 1816 aa19.74■□□□□ 0.75
PTBP1-203ENST00000356948 STAC3Q96MF2 364 aa19.73■□□□□ 0.75
PTBP1-203ENST00000356948 MYOM2P54296 1465 aa19.73■□□□□ 0.75
PTBP1-203ENST00000356948 GGNBP2Q9H3C7 697 aa19.73■□□□□ 0.75
PTBP1-203ENST00000356948 U2AF1L5P0DN76 240 aaPredicted RBP19.72■□□□□ 0.75
PTBP1-203ENST00000356948 U2AF1Q01081 240 aaKnown RBP eCLIP19.72■□□□□ 0.759e-17■■□□□ 14.4
PTBP1-203ENST00000356948 ZNF518AQ6AHZ1 1483 aa19.72■□□□□ 0.75
PTBP1-203ENST00000356948 RARSP54136 660 aaKnown RBP19.71■□□□□ 0.75
PTBP1-203ENST00000356948 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
PTBP1-203ENST00000356948 NFKBIBQ15653 356 aa19.7■□□□□ 0.74
PTBP1-203ENST00000356948 IDI1Q13907 227 aa19.69■□□□□ 0.74
PTBP1-203ENST00000356948 POLR3AO14802 1390 aaPredicted RBP19.69■□□□□ 0.74
PTBP1-203ENST00000356948 FRMPD1Q5SYB0 1578 aa19.69■□□□□ 0.74
PTBP1-203ENST00000356948 RUNDC1Q96C34 613 aa19.69■□□□□ 0.74
PTBP1-203ENST00000356948 BRPF3Q9ULD4 1205 aa19.68■□□□□ 0.74
PTBP1-203ENST00000356948 CD109Q6YHK3 1445 aa19.68■□□□□ 0.74
PTBP1-203ENST00000356948 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
PTBP1-203ENST00000356948 IFT172Q9UG01 1749 aa19.68■□□□□ 0.74
PTBP1-203ENST00000356948 U2SURPO15042 1029 aaKnown RBP19.68■□□□□ 0.74
PTBP1-203ENST00000356948 USP19O94966 1318 aa19.68■□□□□ 0.74
PTBP1-203ENST00000356948 NPM1P06748 294 aaKnown RBP eCLIP19.68■□□□□ 0.74
PTBP1-203ENST00000356948 MINK1Q8N4C8 1332 aaPredicted RBP19.67■□□□□ 0.74
PTBP1-203ENST00000356948 KIAA1210Q9ULL0 1709 aa19.67■□□□□ 0.74
PTBP1-203ENST00000356948 ADGRB1O14514 1584 aa19.67■□□□□ 0.74
PTBP1-203ENST00000356948 SHPRHQ149N8 1683 aa19.67■□□□□ 0.74
PTBP1-203ENST00000356948 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
PTBP1-203ENST00000356948 FRAT2O75474 233 aaPredicted RBP19.66■□□□□ 0.74
PTBP1-203ENST00000356948 SRPK2P78362 688 aaKnown RBP19.65■□□□□ 0.74
PTBP1-203ENST00000356948 FBXO31Q5XUX0 539 aaPredicted RBP19.65■□□□□ 0.74
PTBP1-203ENST00000356948 QRICH2Q9H0J4 1663 aa19.64■□□□□ 0.74
PTBP1-203ENST00000356948 CGNL1Q0VF96 1302 aa19.63■□□□□ 0.73
PTBP1-203ENST00000356948 DDRGK1Q96HY6 314 aa19.63■□□□□ 0.73
PTBP1-203ENST00000356948 SIGLEC1Q9BZZ2 1709 aa19.63■□□□□ 0.73
PTBP1-203ENST00000356948 PDE3AQ14432 1141 aa19.61■□□□□ 0.73
PTBP1-203ENST00000356948 POGZQ7Z3K3 1410 aa19.61■□□□□ 0.73
PTBP1-203ENST00000356948 TULP4Q9NRJ4 1543 aa19.61■□□□□ 0.73
PTBP1-203ENST00000356948 PHF23Q9BUL5 403 aaPredicted RBP19.6■□□□□ 0.73
PTBP1-203ENST00000356948 SBNO2Q9Y2G9 1366 aa19.6■□□□□ 0.73
PTBP1-203ENST00000356948 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
PTBP1-203ENST00000356948 SPRYD3Q8NCJ5 442 aa19.6■□□□□ 0.73
PTBP1-203ENST00000356948 A0A1W2PP64 1363 aa19.59■□□□□ 0.73
PTBP1-203ENST00000356948 PRAM1Q96QH2 718 aa19.59■□□□□ 0.73
PTBP1-203ENST00000356948 SLKQ9H2G2 1235 aaPredicted RBP19.59■□□□□ 0.73
PTBP1-203ENST00000356948 PDZRN3Q9UPQ7 1066 aa19.59■□□□□ 0.73
PTBP1-203ENST00000356948 PPLO60437 1756 aa19.59■□□□□ 0.73
PTBP1-203ENST00000356948 EXOSC9Q06265 439 aaKnown RBP19.59■□□□□ 0.73
PTBP1-203ENST00000356948 EVC2Q86UK5 1308 aa19.58■□□□□ 0.73
PTBP1-203ENST00000356948 IQSEC2Q5JU85 1478 aa19.58■□□□□ 0.72
PTBP1-203ENST00000356948 ABCC3O15438 1527 aa19.57■□□□□ 0.72
PTBP1-203ENST00000356948 MYO3AQ8NEV4 1616 aa19.57■□□□□ 0.72
PTBP1-203ENST00000356948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.56■□□□□ 0.72
PTBP1-203ENST00000356948 TRIM35Q9UPQ4 493 aa19.56■□□□□ 0.72
PTBP1-203ENST00000356948 YEATS2Q9ULM3 1422 aa19.56■□□□□ 0.72
PTBP1-203ENST00000356948 FYB1O15117 783 aa19.55■□□□□ 0.72
PTBP1-203ENST00000356948 GLI2P10070 1586 aa19.55■□□□□ 0.72
PTBP1-203ENST00000356948 LMTK2Q8IWU2 1503 aa19.55■□□□□ 0.72
PTBP1-203ENST00000356948 VGFO15240 615 aaPredicted RBP19.55■□□□□ 0.72
PTBP1-203ENST00000356948 CFAP53Q96M91 514 aa19.55■□□□□ 0.72
PTBP1-203ENST00000356948 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
PTBP1-203ENST00000356948 THUMPD2Q9BTF0 503 aaKnown RBP19.54■□□□□ 0.72
PTBP1-203ENST00000356948 WAPLQ7Z5K2 1190 aa19.54■□□□□ 0.72
PTBP1-203ENST00000356948 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
PTBP1-203ENST00000356948 SSH1Q8WYL5 1049 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 CAMSAP1Q5T5Y3 1602 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 PLEKHF1Q96S99 279 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 ANKRD36BQ8N2N9 1353 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 SLC24A1O60721 1099 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 WDR63Q8IWG1 891 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 CABP1Q9NZU7 370 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 SETBP1Q9Y6X0 1596 aa19.53■□□□□ 0.72
PTBP1-203ENST00000356948 NEURL4Q96JN8 1562 aa19.52■□□□□ 0.72
PTBP1-203ENST00000356948 SMC4Q9NTJ3 1288 aa19.52■□□□□ 0.72
PTBP1-203ENST00000356948 TMPOP42166 694 aaKnown RBP19.52■□□□□ 0.72
PTBP1-203ENST00000356948 POGKQ9P215 609 aa19.52■□□□□ 0.71
PTBP1-203ENST00000356948 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
PTBP1-203ENST00000356948 TRIM27P14373 513 aa19.51■□□□□ 0.71
PTBP1-203ENST00000356948 GSE1Q14687 1217 aa19.51■□□□□ 0.71
PTBP1-203ENST00000356948 USP35Q9P2H5 1018 aa19.51■□□□□ 0.71
PTBP1-203ENST00000356948 ZRANB1Q9UGI0 708 aa19.5■□□□□ 0.71
PTBP1-203ENST00000356948 MLH3Q9UHC1 1453 aa19.5■□□□□ 0.71
PTBP1-203ENST00000356948 NEXMIFQ5QGS0 1516 aa19.5■□□□□ 0.71
PTBP1-203ENST00000356948 FTSJ3Q8IY81 847 aaKnown RBP19.5■□□□□ 0.71
PTBP1-203ENST00000356948 NOB1Q9ULX3 412 aaKnown RBP19.49■□□□□ 0.71
PTBP1-203ENST00000356948 HMOX1P09601 288 aa19.49■□□□□ 0.71
PTBP1-203ENST00000356948 RIPK4P57078 832 aa19.49■□□□□ 0.71
PTBP1-203ENST00000356948 ITPRIPQ8IWB1 547 aa19.49■□□□□ 0.71
PTBP1-203ENST00000356948 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
PTBP1-203ENST00000356948 MLECQ14165 292 aa19.49■□□□□ 0.71
PTBP1-203ENST00000356948 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
PTBP1-203ENST00000356948 MVPQ14764 893 aaKnown RBP19.48■□□□□ 0.71
PTBP1-203ENST00000356948 ARHGEF28Q8N1W1 1705 aaKnown RBP19.48■□□□□ 0.71
PTBP1-203ENST00000356948 RPGRIP1LQ68CZ1 1315 aa19.48■□□□□ 0.71
PTBP1-203ENST00000356948 DZIP1LQ8IYY4 767 aaKnown RBP19.47■□□□□ 0.71
PTBP1-203ENST00000356948 CDK19Q9BWU1 502 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms