RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 ROCK1Q13464 1354 aa13.84□□□□□ -0.19
SPTBN1-202ENST00000356805 H0YHG0 523 aa13.84□□□□□ -0.19
SPTBN1-202ENST00000356805 COG3Q96JB2 828 aa13.84□□□□□ -0.19
SPTBN1-202ENST00000356805 DHX57Q6P158 1386 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-202ENST00000356805 RNF20Q5VTR2 975 aa13.84□□□□□ -0.19
SPTBN1-202ENST00000356805 OLFM4Q6UX06 510 aa13.83□□□□□ -0.19
SPTBN1-202ENST00000356805 LEKR1Q6ZMV7 388 aa13.83□□□□□ -0.19
SPTBN1-202ENST00000356805 BRMS1Q9HCU9 246 aa13.82□□□□□ -0.2
SPTBN1-202ENST00000356805 MYO6Q9UM54 1294 aa13.82□□□□□ -0.2
SPTBN1-202ENST00000356805 EXOC6Q8TAG9 804 aa13.82□□□□□ -0.2
SPTBN1-202ENST00000356805 NACADO15069 1562 aa13.82□□□□□ -0.2
SPTBN1-202ENST00000356805 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
SPTBN1-202ENST00000356805 CCAR1Q8IX12 1150 aaKnown RBP13.82□□□□□ -0.2
SPTBN1-202ENST00000356805 G3BP1Q13283 466 aaKnown RBP eCLIP13.81□□□□□ -0.28e-13■■□□□ 13.2
SPTBN1-202ENST00000356805 TRAK2O60296 914 aa13.81□□□□□ -0.2
SPTBN1-202ENST00000356805 NEFHP12036 1026 aa13.81□□□□□ -0.2
SPTBN1-202ENST00000356805 ANKRD30AQ9BXX3 1397 aa13.81□□□□□ -0.2
SPTBN1-202ENST00000356805 MCM2P49736 904 aa13.8□□□□□ -0.2
SPTBN1-202ENST00000356805 ANKRD62A6NC57 917 aa13.8□□□□□ -0.2
SPTBN1-202ENST00000356805 C22orf23Q9BZE7 217 aa13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 DHX37Q8IY37 1157 aaKnown RBP13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 CRBNQ96SW2 442 aa13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 CCDC73Q6ZRK6 1079 aa13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 UBE2Q2Q8WVN8 375 aa13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 KIF7Q2M1P5 1343 aa13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 HNRNPMP52272 730 aaKnown RBP eCLIP13.79□□□□□ -0.27e-7■■■■□ 21.2
SPTBN1-202ENST00000356805 RALYLQ86SE5 291 aaKnown RBP13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 WASHC4Q2M389 1173 aa13.79□□□□□ -0.2
SPTBN1-202ENST00000356805 CUX2O14529 1486 aa13.78□□□□□ -0.2
SPTBN1-202ENST00000356805 NEUROD6Q96NK8 337 aa13.78□□□□□ -0.2
SPTBN1-202ENST00000356805 INTS3Q68E01 1043 aaKnown RBP13.78□□□□□ -0.2
SPTBN1-202ENST00000356805 SYCP1Q15431 976 aa13.78□□□□□ -0.2
SPTBN1-202ENST00000356805 ZRSR2Q15696 482 aaKnown RBP13.78□□□□□ -0.2
SPTBN1-202ENST00000356805 CARMIL1Q5VZK9 1371 aa13.78□□□□□ -0.2
SPTBN1-202ENST00000356805 PSME1Q06323 249 aa13.78□□□□□ -0.2
SPTBN1-202ENST00000356805 DCAF8L1A6NGE4 600 aa13.77□□□□□ -0.2
SPTBN1-202ENST00000356805 COG6Q9Y2V7 657 aa13.77□□□□□ -0.2
SPTBN1-202ENST00000356805 PRDM2Q13029 1718 aa13.77□□□□□ -0.2
SPTBN1-202ENST00000356805 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.2
SPTBN1-202ENST00000356805 L3MBTL2Q969R5 705 aa13.77□□□□□ -0.21
SPTBN1-202ENST00000356805 CARMIL2Q6F5E8 1435 aa13.77□□□□□ -0.21
SPTBN1-202ENST00000356805 ESPNB1AK53 854 aa13.77□□□□□ -0.21
SPTBN1-202ENST00000356805 SEPT7Q16181 437 aaKnown RBP13.77□□□□□ -0.21
SPTBN1-202ENST00000356805 DEF6Q9H4E7 631 aa13.77□□□□□ -0.21
SPTBN1-202ENST00000356805 CDK5RAP3Q96JB5 506 aa13.76□□□□□ -0.21
SPTBN1-202ENST00000356805 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
SPTBN1-202ENST00000356805 XBP1P17861 261 aa13.76□□□□□ -0.21
SPTBN1-202ENST00000356805 AIMP1Q12904 312 aaKnown RBP13.76□□□□□ -0.21
SPTBN1-202ENST00000356805 PDCL3Q9H2J4 239 aa13.76□□□□□ -0.21
SPTBN1-202ENST00000356805 CIZ1Q9ULV3 898 aaPredicted RBP13.76□□□□□ -0.21
SPTBN1-202ENST00000356805 FKBP5Q13451 457 aaPredicted RBP13.75□□□□□ -0.21
SPTBN1-202ENST00000356805 PANK3Q9H999 370 aa13.75□□□□□ -0.21
SPTBN1-202ENST00000356805 NINLQ9Y2I6 1382 aa13.75□□□□□ -0.21
SPTBN1-202ENST00000356805 ENOX2Q16206 610 aaKnown RBP13.75□□□□□ -0.21
SPTBN1-202ENST00000356805 PPP1R1BQ9UD71 204 aaPredicted RBP13.75□□□□□ -0.21
SPTBN1-202ENST00000356805 SOGA1O94964 1423 aa13.75□□□□□ -0.21
SPTBN1-202ENST00000356805 SMC2O95347 1197 aa13.74□□□□□ -0.21
SPTBN1-202ENST00000356805 PDIA4P13667 645 aaKnown RBP13.74□□□□□ -0.21
SPTBN1-202ENST00000356805 HSP90AB3PQ58FF7 597 aa13.74□□□□□ -0.21
SPTBN1-202ENST00000356805 MAGEC2Q9UBF1 373 aaPredicted RBP13.74□□□□□ -0.21
SPTBN1-202ENST00000356805 RIC3Q7Z5B4 369 aa13.74□□□□□ -0.21
SPTBN1-202ENST00000356805 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
SPTBN1-202ENST00000356805 EIF3JO75822 258 aaKnown RBP13.74□□□□□ -0.21
SPTBN1-202ENST00000356805 EFCAB2Q5VUJ9 269 aa13.73□□□□□ -0.21
SPTBN1-202ENST00000356805 RSPH4AQ5TD94 716 aa13.73□□□□□ -0.21
SPTBN1-202ENST00000356805 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
SPTBN1-202ENST00000356805 GOLGA6L7A0A1B0GV03 622 aa13.73□□□□□ -0.21
SPTBN1-202ENST00000356805 PDCP20941 246 aa13.73□□□□□ -0.21
SPTBN1-202ENST00000356805 AXDND1Q5T1B0 1012 aaPredicted RBP13.73□□□□□ -0.21
SPTBN1-202ENST00000356805 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.73□□□□□ -0.21
SPTBN1-202ENST00000356805 SDF4Q9BRK5 362 aa13.72□□□□□ -0.21
SPTBN1-202ENST00000356805 TSPY26PQ9H489 355 aa13.72□□□□□ -0.21
SPTBN1-202ENST00000356805 KRT18P05783 430 aaKnown RBP13.72□□□□□ -0.21
SPTBN1-202ENST00000356805 ERC2O15083 957 aa13.72□□□□□ -0.21
SPTBN1-202ENST00000356805 IL27Q8NEV9 243 aa13.72□□□□□ -0.21
SPTBN1-202ENST00000356805 ATP2B2Q01814 1243 aa13.72□□□□□ -0.21
SPTBN1-202ENST00000356805 MINK1Q8N4C8 1332 aaPredicted RBP13.72□□□□□ -0.21
SPTBN1-202ENST00000356805 KIF2AO00139 706 aaPredicted RBP13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 EVC2Q86UK5 1308 aa13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 ERLIN1O75477 346 aa13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 ZSCAN30Q86W11 494 aa13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 API5Q9BZZ5 524 aaKnown RBP13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 GRPEL1Q9HAV7 217 aa13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 FAM177BA6PVY3 158 aa13.71□□□□□ -0.21
SPTBN1-202ENST00000356805 BRD4O60885 1362 aaPredicted RBP13.71□□□□□ -0.22
SPTBN1-202ENST00000356805 ATP2B1P20020 1258 aa13.71□□□□□ -0.22
SPTBN1-202ENST00000356805 SMARCE1Q969G3 411 aa13.71□□□□□ -0.22
SPTBN1-202ENST00000356805 KIAA0754O94854 1291 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 RABEP1Q15276 862 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 CCDC112Q8NEF3 446 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 UACAQ9BZF9 1416 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 CNTLNQ9NXG0 1405 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 RIPK4P57078 832 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 ERLIN2O94905 339 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 STK11IPQ8N1F8 1099 aa13.7□□□□□ -0.22
SPTBN1-202ENST00000356805 CALCOCO1Q9P1Z2 691 aa13.69□□□□□ -0.22
SPTBN1-202ENST00000356805 TSPYL4Q9UJ04 414 aa13.69□□□□□ -0.22
SPTBN1-202ENST00000356805 USP47Q96K76 1375 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms