RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 ADCY10Q96PN6 1610 aa9.82□□□□□ -0.84
CD46-203ENST00000354848 PDLIM2Q96JY6 352 aa9.82□□□□□ -0.84
CD46-203ENST00000354848 DDX49Q9Y6V7 483 aaKnown RBP9.82□□□□□ -0.84
CD46-203ENST00000354848 A2MP01023 1474 aa9.82□□□□□ -0.84
CD46-203ENST00000354848 ASXL1Q8IXJ9 1541 aa9.82□□□□□ -0.84
CD46-203ENST00000354848 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
CD46-203ENST00000354848 WWC1Q8IX03 1113 aa9.81□□□□□ -0.84
CD46-203ENST00000354848 NGEFQ8N5V2 710 aa9.81□□□□□ -0.84
CD46-203ENST00000354848 ZKSCAN5Q9Y2L8 839 aa9.81□□□□□ -0.84
CD46-203ENST00000354848 PRG4Q92954 1404 aaPredicted RBP9.81□□□□□ -0.84
CD46-203ENST00000354848 EIF2AK4Q9P2K8 1649 aaKnown RBP9.81□□□□□ -0.84
CD46-203ENST00000354848 GOLGA6L22H0YM25 854 aa9.8□□□□□ -0.84
CD46-203ENST00000354848 ZNF445P59923 1031 aa9.8□□□□□ -0.84
CD46-203ENST00000354848 SASS6Q6UVJ0 657 aa9.8□□□□□ -0.84
CD46-203ENST00000354848 FOXD4L1Q9NU39 408 aa9.8□□□□□ -0.84
CD46-203ENST00000354848 CDC42BPAQ5VT25 1732 aa9.8□□□□□ -0.84
CD46-203ENST00000354848 SSFA2P28290 1259 aa9.8□□□□□ -0.84
CD46-203ENST00000354848 SYNMO15061 1565 aa9.8□□□□□ -0.84
CD46-203ENST00000354848 RAPGEF6Q8TEU7 1601 aa9.79□□□□□ -0.84
CD46-203ENST00000354848 BCL2L13Q9BXK5 485 aa9.79□□□□□ -0.84
CD46-203ENST00000354848 TROQ12816 1431 aaPredicted RBP9.79□□□□□ -0.84
CD46-203ENST00000354848 CLEC17AQ6ZS10 378 aa9.79□□□□□ -0.84
CD46-203ENST00000354848 BBXQ8WY36 941 aaPredicted RBP9.79□□□□□ -0.84
CD46-203ENST00000354848 RBSNQ9H1K0 784 aa9.79□□□□□ -0.84
CD46-203ENST00000354848 C9orf84Q5VXU9 1444 aa9.79□□□□□ -0.84
CD46-203ENST00000354848 CD2BP2O95400 341 aaKnown RBP9.78□□□□□ -0.84
CD46-203ENST00000354848 BAG4O95429 457 aaKnown RBP9.78□□□□□ -0.84
CD46-203ENST00000354848 MCM5P33992 734 aa9.78□□□□□ -0.84
CD46-203ENST00000354848 SHANK2Q9UPX8 1470 aa9.78□□□□□ -0.84
CD46-203ENST00000354848 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
CD46-203ENST00000354848 RNF17Q9BXT8 1623 aaKnown RBP9.78□□□□□ -0.84
CD46-203ENST00000354848 MVPQ14764 893 aaKnown RBP9.78□□□□□ -0.84
CD46-203ENST00000354848 ZSCAN23Q3MJ62 389 aa9.78□□□□□ -0.84
CD46-203ENST00000354848 KIF2CQ99661 725 aa9.78□□□□□ -0.84
CD46-203ENST00000354848 MYOM1P52179 1685 aa9.77□□□□□ -0.84
CD46-203ENST00000354848 CCDC141Q6ZP82 1450 aa9.77□□□□□ -0.84
CD46-203ENST00000354848 ARHGAP31Q2M1Z3 1444 aa9.77□□□□□ -0.84
CD46-203ENST00000354848 NPC1L1Q9UHC9 1359 aa9.77□□□□□ -0.84
CD46-203ENST00000354848 NCLP19338 710 aaKnown RBP9.77□□□□□ -0.84
CD46-203ENST00000354848 GTF2E1P29083 439 aaPredicted RBP9.77□□□□□ -0.84
CD46-203ENST00000354848 K7ELQ4 463 aaPredicted RBP9.77□□□□□ -0.85
CD46-203ENST00000354848 CAVIN1Q6NZI2 390 aaKnown RBP9.77□□□□□ -0.85
CD46-203ENST00000354848 PPP4R3BQ5MIZ7 849 aa9.77□□□□□ -0.85
CD46-203ENST00000354848 TNNT2P45379 298 aaPredicted RBP9.76□□□□□ -0.85
CD46-203ENST00000354848 GTPBP4Q9BZE4 634 aaKnown RBP9.76□□□□□ -0.85
CD46-203ENST00000354848 GRIN2AQ12879 1464 aa9.76□□□□□ -0.85
CD46-203ENST00000354848 NUP160Q12769 1436 aa9.76□□□□□ -0.85
CD46-203ENST00000354848 KIF20AO95235 890 aa9.76□□□□□ -0.85
CD46-203ENST00000354848 PRIM1P49642 420 aaKnown RBP9.76□□□□□ -0.85
CD46-203ENST00000354848 GAS2L2Q8NHY3 880 aa9.76□□□□□ -0.85
CD46-203ENST00000354848 PLA2R1Q13018 1463 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 NEUROD2Q15784 382 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 STAC3Q96MF2 364 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 PBRM1Q86U86 1689 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 HDAC1Q13547 482 aaPredicted RBP9.75□□□□□ -0.85
CD46-203ENST00000354848 CCDC39Q9UFE4 941 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 IQGAP1P46940 1657 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 KIAA0556O60303 1618 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 CBX1P83916 185 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 MCTP1Q6DN14 999 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 MYRIPQ8NFW9 859 aa9.75□□□□□ -0.85
CD46-203ENST00000354848 JARID2Q92833 1246 aaPredicted RBP9.74□□□□□ -0.85
CD46-203ENST00000354848 ZNF710Q8N1W2 664 aa9.74□□□□□ -0.85
CD46-203ENST00000354848 RBM42Q9BTD8 480 aaKnown RBP9.74□□□□□ -0.85
CD46-203ENST00000354848 LMBRD1Q9NUN5 540 aa9.74□□□□□ -0.85
CD46-203ENST00000354848 SYNJ2O15056 1496 aa9.74□□□□□ -0.85
CD46-203ENST00000354848 LETM1O95202 739 aaPredicted RBP9.73□□□□□ -0.85
CD46-203ENST00000354848 FTSJ3Q8IY81 847 aaKnown RBP9.73□□□□□ -0.85
CD46-203ENST00000354848 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
CD46-203ENST00000354848 TSPY4P0CV99 314 aa9.73□□□□□ -0.85
CD46-203ENST00000354848 TSPY10P0CW01 314 aa9.73□□□□□ -0.85
CD46-203ENST00000354848 DZIP1LQ8IYY4 767 aaKnown RBP9.73□□□□□ -0.85
CD46-203ENST00000354848 DISP1Q96F81 1524 aa9.73□□□□□ -0.85
CD46-203ENST00000354848 CDCA8Q53HL2 280 aa9.73□□□□□ -0.85
CD46-203ENST00000354848 ZKSCAN2Q63HK3 967 aa9.73□□□□□ -0.85
CD46-203ENST00000354848 SHPRHQ149N8 1683 aa9.72□□□□□ -0.85
CD46-203ENST00000354848 TSC1Q92574 1164 aa9.72□□□□□ -0.85
CD46-203ENST00000354848 ATP2B3Q16720 1220 aa9.72□□□□□ -0.85
CD46-203ENST00000354848 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
CD46-203ENST00000354848 PHF23Q9BUL5 403 aaPredicted RBP9.71□□□□□ -0.85
CD46-203ENST00000354848 ADAMTS12P58397 1594 aa9.71□□□□□ -0.86
CD46-203ENST00000354848 KIAA2012Q0VF49 1180 aa9.71□□□□□ -0.86
CD46-203ENST00000354848 WDR63Q8IWG1 891 aa9.71□□□□□ -0.86
CD46-203ENST00000354848 RBM27Q9P2N5 1060 aaKnown RBP9.71□□□□□ -0.86
CD46-203ENST00000354848 IQSEC2Q5JU85 1478 aa9.71□□□□□ -0.86
CD46-203ENST00000354848 DNTTIP2Q5QJE6 756 aaKnown RBP9.71□□□□□ -0.86
CD46-203ENST00000354848 TCP11L2Q8N4U5 519 aa9.71□□□□□ -0.86
CD46-203ENST00000354848 CEP152O94986 1710 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 POLR3AO14802 1390 aaPredicted RBP9.7□□□□□ -0.86
CD46-203ENST00000354848 ZBTB7CA1YPR0 619 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 GTF2F1P35269 517 aaKnown RBP eCLIP9.7□□□□□ -0.86
CD46-203ENST00000354848 LRSAM1Q6UWE0 723 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 GPT2Q8TD30 523 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 TMEM51Q9NW97 253 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 KIF16BQ96L93 1317 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 KDM5AP29375 1690 aaKnown RBP9.7□□□□□ -0.86
CD46-203ENST00000354848 CYP2E1P05181 493 aaPredicted RBP9.7□□□□□ -0.86
CD46-203ENST00000354848 NUCB1Q02818 461 aa9.7□□□□□ -0.86
CD46-203ENST00000354848 RUNDC1Q96C34 613 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms