RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
TNFSF13-202ENST00000349228 KDM2BQ8NHM5 1336 aa20.18■□□□□ 0.82
TNFSF13-202ENST00000349228 DIP2CQ9Y2E4 1556 aa20.17■□□□□ 0.82
TNFSF13-202ENST00000349228 NINLQ9Y2I6 1382 aa20.17■□□□□ 0.82
TNFSF13-202ENST00000349228 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
TNFSF13-202ENST00000349228 NEXMIFQ5QGS0 1516 aa20.15■□□□□ 0.82
TNFSF13-202ENST00000349228 CFAP53Q96M91 514 aa20.15■□□□□ 0.82
TNFSF13-202ENST00000349228 SLC12A5Q9H2X9 1139 aa20.15■□□□□ 0.82
TNFSF13-202ENST00000349228 RAPGEF3O95398 923 aa20.14■□□□□ 0.81
TNFSF13-202ENST00000349228 RUNDC1Q96C34 613 aa20.14■□□□□ 0.81
TNFSF13-202ENST00000349228 RTN4Q9NQC3 1192 aaKnown RBP20.14■□□□□ 0.81
TNFSF13-202ENST00000349228 GLI2P10070 1586 aa20.14■□□□□ 0.81
TNFSF13-202ENST00000349228 ANKRD36BQ8N2N9 1353 aa20.14■□□□□ 0.81
TNFSF13-202ENST00000349228 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
TNFSF13-202ENST00000349228 PLPPR3Q6T4P5 718 aa20.13■□□□□ 0.81
TNFSF13-202ENST00000349228 PAK3O75914 559 aaPredicted RBP20.12■□□□□ 0.81
TNFSF13-202ENST00000349228 PDE3AQ14432 1141 aa20.12■□□□□ 0.81
TNFSF13-202ENST00000349228 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
TNFSF13-202ENST00000349228 SIGLEC1Q9BZZ2 1709 aa20.1■□□□□ 0.81
TNFSF13-202ENST00000349228 CCDC27Q2M243 656 aa20.1■□□□□ 0.81
TNFSF13-202ENST00000349228 WDR63Q8IWG1 891 aa20.1■□□□□ 0.81
TNFSF13-202ENST00000349228 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
TNFSF13-202ENST00000349228 RICTORQ6R327 1708 aa20.1■□□□□ 0.81
TNFSF13-202ENST00000349228 AAMPQ13685 434 aa20.09■□□□□ 0.81
TNFSF13-202ENST00000349228 IDI1Q13907 227 aa20.09■□□□□ 0.81
TNFSF13-202ENST00000349228 PHF23Q9BUL5 403 aaPredicted RBP20.09■□□□□ 0.81
TNFSF13-202ENST00000349228 DDRGK1Q96HY6 314 aa20.07■□□□□ 0.8
TNFSF13-202ENST00000349228 ARHGEF28Q8N1W1 1705 aaKnown RBP20.07■□□□□ 0.8
TNFSF13-202ENST00000349228 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
TNFSF13-202ENST00000349228 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
TNFSF13-202ENST00000349228 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
TNFSF13-202ENST00000349228 MTHFSP49914 203 aa20.05■□□□□ 0.8
TNFSF13-202ENST00000349228 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
TNFSF13-202ENST00000349228 IQSEC2Q5JU85 1478 aa20.05■□□□□ 0.8
TNFSF13-202ENST00000349228 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
TNFSF13-202ENST00000349228 ATAD2Q6PL18 1390 aa20.03■□□□□ 0.8
TNFSF13-202ENST00000349228 BCAR3O75815 825 aa20.03■□□□□ 0.8
TNFSF13-202ENST00000349228 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
TNFSF13-202ENST00000349228 FAM161AQ3B820 660 aa20.02■□□□□ 0.79
TNFSF13-202ENST00000349228 YEATS2Q9ULM3 1422 aa20.02■□□□□ 0.79
TNFSF13-202ENST00000349228 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
TNFSF13-202ENST00000349228 ABCC11Q96J66 1382 aa20.01■□□□□ 0.79
TNFSF13-202ENST00000349228 TMEM131LA2VDJ0 1609 aa20■□□□□ 0.79
TNFSF13-202ENST00000349228 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
TNFSF13-202ENST00000349228 MYH16Q9H6N6 1097 aa19.99■□□□□ 0.79
TNFSF13-202ENST00000349228 TERF2IPQ9NYB0 399 aa19.99■□□□□ 0.79
TNFSF13-202ENST00000349228 MED14O60244 1454 aa19.99■□□□□ 0.79
TNFSF13-202ENST00000349228 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
TNFSF13-202ENST00000349228 CABP2Q9NPB3 220 aa19.98■□□□□ 0.79
TNFSF13-202ENST00000349228 CT47B1P0C2W7 299 aaPredicted RBP19.98■□□□□ 0.79
TNFSF13-202ENST00000349228 NUTM2DQ5VT03 806 aaPredicted RBP19.98■□□□□ 0.79
TNFSF13-202ENST00000349228 CANXP27824 592 aaKnown RBP19.97■□□□□ 0.79
TNFSF13-202ENST00000349228 RARSP54136 660 aaKnown RBP19.97■□□□□ 0.79
TNFSF13-202ENST00000349228 RTL5Q5HYW3 569 aaPredicted RBP19.97■□□□□ 0.79
TNFSF13-202ENST00000349228 PTPRMP28827 1452 aa19.96■□□□□ 0.79
TNFSF13-202ENST00000349228 SRPK2P78362 688 aaKnown RBP19.96■□□□□ 0.79
TNFSF13-202ENST00000349228 YTHDC2Q9H6S0 1430 aaKnown RBP19.95■□□□□ 0.78
TNFSF13-202ENST00000349228 CLUAP1Q96AJ1 413 aa19.95■□□□□ 0.78
TNFSF13-202ENST00000349228 REREQ9P2R6 1566 aa19.95■□□□□ 0.78
TNFSF13-202ENST00000349228 PPM1GO15355 546 aaPredicted RBP19.95■□□□□ 0.78
TNFSF13-202ENST00000349228 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
TNFSF13-202ENST00000349228 A0A1W2PP64 1363 aa19.94■□□□□ 0.78
TNFSF13-202ENST00000349228 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
TNFSF13-202ENST00000349228 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.78
TNFSF13-202ENST00000349228 CLTCQ00610 1675 aaKnown RBP19.94■□□□□ 0.78
TNFSF13-202ENST00000349228 AGLP35573 1532 aa19.94■□□□□ 0.78
TNFSF13-202ENST00000349228 PLEKHG5O94827 1062 aa19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 PNNQ9H307 717 aaKnown RBP19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 POGKQ9P215 609 aa19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 NBR1Q14596 966 aa19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 NEUROD2Q15784 382 aa19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 PMFBP1Q8TBY8 1022 aa19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 STK26Q9P289 416 aa19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 MAPK8IP3Q9UPT6 1336 aa19.93■□□□□ 0.78
TNFSF13-202ENST00000349228 ADGRB2O60241 1585 aa19.92■□□□□ 0.78
TNFSF13-202ENST00000349228 C8orf34Q49A92 452 aa19.92■□□□□ 0.78
TNFSF13-202ENST00000349228 HDGFL2Q7Z4V5 671 aaPredicted RBP19.92■□□□□ 0.78
TNFSF13-202ENST00000349228 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
TNFSF13-202ENST00000349228 PRAM1Q96QH2 718 aa19.91■□□□□ 0.78
TNFSF13-202ENST00000349228 SKAP1Q86WV1 359 aa19.9■□□□□ 0.78
TNFSF13-202ENST00000349228 DEKP35659 375 aaKnown RBP19.9■□□□□ 0.78
TNFSF13-202ENST00000349228 ZMYM3Q14202 1370 aa19.89■□□□□ 0.77
TNFSF13-202ENST00000349228 IL16Q14005 1332 aa19.89■□□□□ 0.77
TNFSF13-202ENST00000349228 ALKQ9UM73 1620 aa19.89■□□□□ 0.77
TNFSF13-202ENST00000349228 SAFB2Q14151 953 aaKnown RBP eCLIP19.88■□□□□ 0.77
TNFSF13-202ENST00000349228 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
TNFSF13-202ENST00000349228 DLC1Q96QB1 1528 aa19.88■□□□□ 0.77
TNFSF13-202ENST00000349228 FYB1O15117 783 aa19.88■□□□□ 0.77
TNFSF13-202ENST00000349228 PANK1Q8TE04 598 aa19.88■□□□□ 0.77
TNFSF13-202ENST00000349228 STAG3Q9UJ98 1225 aa19.88■□□□□ 0.77
TNFSF13-202ENST00000349228 IGHDP01880 384 aa19.87■□□□□ 0.77
TNFSF13-202ENST00000349228 FRAT1Q92837 279 aaPredicted RBP19.87■□□□□ 0.77
TNFSF13-202ENST00000349228 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
TNFSF13-202ENST00000349228 MINK1Q8N4C8 1332 aaPredicted RBP19.87■□□□□ 0.77
TNFSF13-202ENST00000349228 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
TNFSF13-202ENST00000349228 PLEKHF1Q96S99 279 aa19.86■□□□□ 0.77
TNFSF13-202ENST00000349228 ARHGEF40Q8TER5 1519 aa19.86■□□□□ 0.77
TNFSF13-202ENST00000349228 CD163L1Q9NR16 1453 aa19.86■□□□□ 0.77
TNFSF13-202ENST00000349228 RGS3P49796 1198 aa19.86■□□□□ 0.77
TNFSF13-202ENST00000349228 MYO5BQ9ULV0 1848 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms