RNA–Protein interactions for RNA: ENST00000348141.9

PTPA-203, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 5 BASIC

Gene PTPA, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-203ENST00000348141 ABCC2Q92887 1545 aa21.34■■□□□ 1.01
PTPA-203ENST00000348141 RBM25P49756 843 aaKnown RBP21.34■■□□□ 1.01
PTPA-203ENST00000348141 SASS6Q6UVJ0 657 aa21.34■■□□□ 1.01
PTPA-203ENST00000348141 WDR7Q9Y4E6 1490 aa21.34■■□□□ 1.01
PTPA-203ENST00000348141 PIK3C2GO75747 1445 aa21.33■■□□□ 1.01
PTPA-203ENST00000348141 CSPP1Q1MSJ5 1256 aa21.33■■□□□ 1.01
PTPA-203ENST00000348141 PLXNC1O60486 1568 aa21.33■■□□□ 1
PTPA-203ENST00000348141 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
PTPA-203ENST00000348141 WWC1Q8IX03 1113 aa21.32■■□□□ 1
PTPA-203ENST00000348141 RBSNQ9H1K0 784 aa21.32■■□□□ 1
PTPA-203ENST00000348141 FAM135AQ9P2D6 1515 aa21.32■■□□□ 1
PTPA-203ENST00000348141 ZNF445P59923 1031 aa21.32■■□□□ 1
PTPA-203ENST00000348141 PBRM1Q86U86 1689 aa21.32■■□□□ 1
PTPA-203ENST00000348141 GOLGA6L22H0YM25 854 aa21.31■■□□□ 1
PTPA-203ENST00000348141 PPP4R3BQ5MIZ7 849 aa21.31■■□□□ 1
PTPA-203ENST00000348141 JARID2Q92833 1246 aaPredicted RBP21.3■■□□□ 1
PTPA-203ENST00000348141 STAC3Q96MF2 364 aa21.3■■□□□ 1
PTPA-203ENST00000348141 BCL11BQ9C0K0 894 aaPredicted RBP21.29■■□□□ 1
PTPA-203ENST00000348141 BAG4O95429 457 aaKnown RBP21.28■■□□□ 1
PTPA-203ENST00000348141 ZSCAN23Q3MJ62 389 aa21.28■■□□□ 1
PTPA-203ENST00000348141 CAVIN1Q6NZI2 390 aaKnown RBP21.28■■□□□ 1
PTPA-203ENST00000348141 CROCC2H7BZ55 1655 aa21.27■■□□□ 1
PTPA-203ENST00000348141 CBX1P83916 185 aa21.27■■□□□ 1
PTPA-203ENST00000348141 KIF2CQ99661 725 aa21.27■■□□□ 1
PTPA-203ENST00000348141 NCLP19338 710 aaKnown RBP21.27■□□□□ 0.99
PTPA-203ENST00000348141 TNNT2P45379 298 aaPredicted RBP21.26■□□□□ 0.99
PTPA-203ENST00000348141 CLEC17AQ6ZS10 378 aa21.26■□□□□ 0.99
PTPA-203ENST00000348141 PRIM1P49642 420 aaKnown RBP21.26■□□□□ 0.99
PTPA-203ENST00000348141 TSC1Q92574 1164 aa21.25■□□□□ 0.99
PTPA-203ENST00000348141 A2MP01023 1474 aa21.25■□□□□ 0.99
PTPA-203ENST00000348141 ABCC10Q5T3U5 1492 aa21.25■□□□□ 0.99
PTPA-203ENST00000348141 MCM5P33992 734 aa21.25■□□□□ 0.99
PTPA-203ENST00000348141 NEUROD2Q15784 382 aa21.25■□□□□ 0.99
PTPA-203ENST00000348141 LAMC1P11047 1609 aa21.24■□□□□ 0.99
PTPA-203ENST00000348141 MVPQ14764 893 aaKnown RBP21.24■□□□□ 0.99
PTPA-203ENST00000348141 GAS2L2Q8NHY3 880 aa21.24■□□□□ 0.99
PTPA-203ENST00000348141 GTPBP4Q9BZE4 634 aaKnown RBP21.24■□□□□ 0.99
PTPA-203ENST00000348141 K7ELQ4 463 aaPredicted RBP21.24■□□□□ 0.99
PTPA-203ENST00000348141 PRG4Q92954 1404 aaPredicted RBP21.24■□□□□ 0.99
PTPA-203ENST00000348141 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
PTPA-203ENST00000348141 ASXL1Q8IXJ9 1541 aa21.23■□□□□ 0.99
PTPA-203ENST00000348141 KIF20AO95235 890 aa21.23■□□□□ 0.99
PTPA-203ENST00000348141 NGEFQ8N5V2 710 aa21.23■□□□□ 0.99
PTPA-203ENST00000348141 ZBTB7CA1YPR0 619 aa21.23■□□□□ 0.99
PTPA-203ENST00000348141 MCTP1Q6DN14 999 aa21.23■□□□□ 0.99
PTPA-203ENST00000348141 ZNF710Q8N1W2 664 aa21.23■□□□□ 0.99
PTPA-203ENST00000348141 PTPRGP23470 1445 aa21.23■□□□□ 0.99
PTPA-203ENST00000348141 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
PTPA-203ENST00000348141 NUP153P49790 1475 aaKnown RBP21.22■□□□□ 0.99
PTPA-203ENST00000348141 IQGAP2Q13576 1575 aa21.21■□□□□ 0.99
PTPA-203ENST00000348141 MYRIPQ8NFW9 859 aa21.21■□□□□ 0.99
PTPA-203ENST00000348141 RRP7AQ9Y3A4 280 aaKnown RBP21.21■□□□□ 0.99
PTPA-203ENST00000348141 ITSN2Q9NZM3 1697 aa21.2■□□□□ 0.98
PTPA-203ENST00000348141 NAP1L2Q9ULW6 460 aaPredicted RBP21.2■□□□□ 0.98
PTPA-203ENST00000348141 ATP2B3Q16720 1220 aa21.2■□□□□ 0.98
PTPA-203ENST00000348141 CCDC39Q9UFE4 941 aa21.2■□□□□ 0.98
PTPA-203ENST00000348141 ADAMTS12P58397 1594 aa21.19■□□□□ 0.98
PTPA-203ENST00000348141 LMBRD1Q9NUN5 540 aa21.19■□□□□ 0.98
PTPA-203ENST00000348141 LETM1O95202 739 aaPredicted RBP21.18■□□□□ 0.98
PTPA-203ENST00000348141 CHMP4BQ9H444 224 aaKnown RBP21.18■□□□□ 0.98
PTPA-203ENST00000348141 TMEM51Q9NW97 253 aa21.18■□□□□ 0.98
PTPA-203ENST00000348141 RBM27Q9P2N5 1060 aaKnown RBP21.18■□□□□ 0.98
PTPA-203ENST00000348141 C9orf84Q5VXU9 1444 aa21.17■□□□□ 0.98
PTPA-203ENST00000348141 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
PTPA-203ENST00000348141 ARHGAP31Q2M1Z3 1444 aa21.17■□□□□ 0.98
PTPA-203ENST00000348141 MAGI1Q96QZ7 1491 aaPredicted RBP21.17■□□□□ 0.98
PTPA-203ENST00000348141 FTSJ3Q8IY81 847 aaKnown RBP21.16■□□□□ 0.98
PTPA-203ENST00000348141 ADCY10Q96PN6 1610 aa21.16■□□□□ 0.98
PTPA-203ENST00000348141 SYNJ2O15056 1496 aa21.15■□□□□ 0.98
PTPA-203ENST00000348141 TROQ12816 1431 aaPredicted RBP21.15■□□□□ 0.98
PTPA-203ENST00000348141 DNTTIP2Q5QJE6 756 aaKnown RBP21.15■□□□□ 0.98
PTPA-203ENST00000348141 DZIP1LQ8IYY4 767 aaKnown RBP21.15■□□□□ 0.98
PTPA-203ENST00000348141 SHROOM2Q13796 1616 aa21.14■□□□□ 0.98
PTPA-203ENST00000348141 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
PTPA-203ENST00000348141 FAM177BA6PVY3 158 aa21.14■□□□□ 0.97
PTPA-203ENST00000348141 AK9Q5TCS8 1911 aa21.14■□□□□ 0.97
PTPA-203ENST00000348141 PDIA4P13667 645 aaKnown RBP21.13■□□□□ 0.97
PTPA-203ENST00000348141 NPC1L1Q9UHC9 1359 aa21.13■□□□□ 0.97
PTPA-203ENST00000348141 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
PTPA-203ENST00000348141 ZKSCAN2Q63HK3 967 aa21.13■□□□□ 0.97
PTPA-203ENST00000348141 GPT2Q8TD30 523 aa21.13■□□□□ 0.97
PTPA-203ENST00000348141 PLA2R1Q13018 1463 aa21.12■□□□□ 0.97
PTPA-203ENST00000348141 SYNMO15061 1565 aa21.12■□□□□ 0.97
PTPA-203ENST00000348141 PKP1Q13835 747 aa21.12■□□□□ 0.97
PTPA-203ENST00000348141 LNPKQ9C0E8 428 aa21.12■□□□□ 0.97
PTPA-203ENST00000348141 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.11■□□□□ 0.97
PTPA-203ENST00000348141 SYCE3A1L190 88 aa21.1■□□□□ 0.97
PTPA-203ENST00000348141 SPDYE4A6NLX3 237 aa21.1■□□□□ 0.97
PTPA-203ENST00000348141 PRPF40AO75400 957 aaKnown RBP21.1■□□□□ 0.97
PTPA-203ENST00000348141 RNF214Q8ND24 703 aa21.1■□□□□ 0.97
PTPA-203ENST00000348141 CCDC141Q6ZP82 1450 aa21.1■□□□□ 0.97
PTPA-203ENST00000348141 EIF2AK4Q9P2K8 1649 aaKnown RBP21.1■□□□□ 0.97
PTPA-203ENST00000348141 IGSF3O75054 1194 aa21.1■□□□□ 0.97
PTPA-203ENST00000348141 LRSAM1Q6UWE0 723 aa21.1■□□□□ 0.97
PTPA-203ENST00000348141 PTMAP06454 111 aaKnown RBP21.09■□□□□ 0.97
PTPA-203ENST00000348141 TSPY4P0CV99 314 aa21.09■□□□□ 0.97
PTPA-203ENST00000348141 TSPY10P0CW01 314 aa21.09■□□□□ 0.97
PTPA-203ENST00000348141 GTF2F1P35269 517 aaKnown RBP eCLIP21.09■□□□□ 0.976e-11■■■■■ 32.8
PTPA-203ENST00000348141 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
PTPA-203ENST00000348141 PRIMPOLQ96LW4 560 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms