RNA–Protein interactions for RNA: ENST00000347557.6

SMTN-202, Transcript of smoothelin, humanhuman

TSL 1 (best) BASIC

Gene SMTN, Length 3,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-202ENST00000347557 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
SMTN-202ENST00000347557 UPF2Q9HAU5 1272 aaKnown RBP18.65■□□□□ 0.58
SMTN-202ENST00000347557 PDZRN3Q9UPQ7 1066 aa18.65■□□□□ 0.58
SMTN-202ENST00000347557 ZFYVE16Q7Z3T8 1539 aa18.65■□□□□ 0.58
SMTN-202ENST00000347557 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
SMTN-202ENST00000347557 RTEL1-TNFRSF6BF6WH68 1400 aa18.64■□□□□ 0.57
SMTN-202ENST00000347557 BECN1Q14457 450 aa18.64■□□□□ 0.57
SMTN-202ENST00000347557 KDM5AP29375 1690 aaKnown RBP18.64■□□□□ 0.57
SMTN-202ENST00000347557 SPHKAPQ2M3C7 1700 aa18.64■□□□□ 0.57
SMTN-202ENST00000347557 ADGRL1O94910 1474 aa18.64■□□□□ 0.57
SMTN-202ENST00000347557 CFAP65Q6ZU64 1925 aaKnown RBP18.63■□□□□ 0.57
SMTN-202ENST00000347557 PMFBP1Q8TBY8 1022 aa18.63■□□□□ 0.57
SMTN-202ENST00000347557 ATP7AQ04656 1500 aa18.61■□□□□ 0.57
SMTN-202ENST00000347557 POLR3AO14802 1390 aaPredicted RBP18.61■□□□□ 0.57
SMTN-202ENST00000347557 USP19O94966 1318 aa18.61■□□□□ 0.57
SMTN-202ENST00000347557 SRPK2P78362 688 aaKnown RBP18.61■□□□□ 0.57
SMTN-202ENST00000347557 GGNBP2Q9H3C7 697 aa18.61■□□□□ 0.57
SMTN-202ENST00000347557 MYOM1P52179 1685 aa18.61■□□□□ 0.57
SMTN-202ENST00000347557 NGEFQ8N5V2 710 aa18.6■□□□□ 0.57
SMTN-202ENST00000347557 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
SMTN-202ENST00000347557 SHROOM2Q13796 1616 aa18.59■□□□□ 0.57
SMTN-202ENST00000347557 RWDD1Q9H446 243 aaPredicted RBP18.59■□□□□ 0.57
SMTN-202ENST00000347557 POGKQ9P215 609 aa18.59■□□□□ 0.57
SMTN-202ENST00000347557 MYH16Q9H6N6 1097 aa18.59■□□□□ 0.57
SMTN-202ENST00000347557 CEP152O94986 1710 aa18.59■□□□□ 0.57
SMTN-202ENST00000347557 ITPRIPQ8IWB1 547 aa18.58■□□□□ 0.56
SMTN-202ENST00000347557 C14orf93Q9H972 538 aaKnown RBP18.58■□□□□ 0.56
SMTN-202ENST00000347557 CLASP1Q7Z460 1538 aa18.57■□□□□ 0.56
SMTN-202ENST00000347557 MFAP1P55081 439 aaKnown RBP18.57■□□□□ 0.56
SMTN-202ENST00000347557 NPM1P06748 294 aaKnown RBP eCLIP18.57■□□□□ 0.56
SMTN-202ENST00000347557 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
SMTN-202ENST00000347557 ABCA6Q8N139 1617 aa18.57■□□□□ 0.56
SMTN-202ENST00000347557 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
SMTN-202ENST00000347557 TET3O43151 1660 aa18.56■□□□□ 0.56
SMTN-202ENST00000347557 ZKSCAN2Q63HK3 967 aa18.56■□□□□ 0.56
SMTN-202ENST00000347557 DZIP1LQ8IYY4 767 aaKnown RBP18.55■□□□□ 0.56
SMTN-202ENST00000347557 EVC2Q86UK5 1308 aa18.55■□□□□ 0.56
SMTN-202ENST00000347557 MAP3K4Q9Y6R4 1608 aa18.54■□□□□ 0.56
SMTN-202ENST00000347557 GZF1Q9H116 711 aaPredicted RBP18.54■□□□□ 0.56
SMTN-202ENST00000347557 MINK1Q8N4C8 1332 aaPredicted RBP18.53■□□□□ 0.56
SMTN-202ENST00000347557 MVPQ14764 893 aaKnown RBP18.53■□□□□ 0.56
SMTN-202ENST00000347557 ZMYND15Q9H091 742 aa18.53■□□□□ 0.56
SMTN-202ENST00000347557 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
SMTN-202ENST00000347557 RAPGEF3O95398 923 aa18.51■□□□□ 0.55
SMTN-202ENST00000347557 TBC1D2Q9BYX2 928 aa18.51■□□□□ 0.55
SMTN-202ENST00000347557 UHRF1BP1LA0JNW5 1464 aa18.51■□□□□ 0.55
SMTN-202ENST00000347557 FBLN1P23142 703 aa18.5■□□□□ 0.55
SMTN-202ENST00000347557 MYOM2P54296 1465 aa18.5■□□□□ 0.55
SMTN-202ENST00000347557 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
SMTN-202ENST00000347557 RIPK4P57078 832 aa18.49■□□□□ 0.55
SMTN-202ENST00000347557 NOB1Q9ULX3 412 aaKnown RBP18.49■□□□□ 0.55
SMTN-202ENST00000347557 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
SMTN-202ENST00000347557 TRIM27P14373 513 aa18.48■□□□□ 0.55
SMTN-202ENST00000347557 TBC1D32Q96NH3 1257 aa18.48■□□□□ 0.55
SMTN-202ENST00000347557 ASXL2Q76L83 1435 aa18.48■□□□□ 0.55
SMTN-202ENST00000347557 TMPOP42166 694 aaKnown RBP18.47■□□□□ 0.55
SMTN-202ENST00000347557 KIF1BO60333 1816 aa18.47■□□□□ 0.55
SMTN-202ENST00000347557 NPATQ14207 1427 aa18.46■□□□□ 0.55
SMTN-202ENST00000347557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMTN-202ENST00000347557 SBNO2Q9Y2G9 1366 aa18.46■□□□□ 0.55
SMTN-202ENST00000347557 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
SMTN-202ENST00000347557 ELL2O00472 640 aaPredicted RBP18.45■□□□□ 0.54
SMTN-202ENST00000347557 C22orf23Q9BZE7 217 aa18.45■□□□□ 0.54
SMTN-202ENST00000347557 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
SMTN-202ENST00000347557 MROH2AA6NES4 1674 aa18.45■□□□□ 0.54
SMTN-202ENST00000347557 GLIPR1L2Q4G1C9 344 aa18.45■□□□□ 0.54
SMTN-202ENST00000347557 TMEM57Q8N5G2 664 aa18.45■□□□□ 0.54
SMTN-202ENST00000347557 LNPKQ9C0E8 428 aa18.44■□□□□ 0.54
SMTN-202ENST00000347557 EFCAB6Q5THR3 1501 aa18.44■□□□□ 0.54
SMTN-202ENST00000347557 IDI1Q13907 227 aa18.44■□□□□ 0.54
SMTN-202ENST00000347557 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
SMTN-202ENST00000347557 CCDC27Q2M243 656 aa18.43■□□□□ 0.54
SMTN-202ENST00000347557 PRAM1Q96QH2 718 aa18.43■□□□□ 0.54
SMTN-202ENST00000347557 INO80Q9ULG1 1556 aaPredicted RBP18.43■□□□□ 0.54
SMTN-202ENST00000347557 VWDEQ8N2E2 1590 aa18.43■□□□□ 0.54
SMTN-202ENST00000347557 ATF7IPQ6VMQ6 1270 aa18.43■□□□□ 0.54
SMTN-202ENST00000347557 VSIG10Q8N0Z9 540 aa18.43■□□□□ 0.54
SMTN-202ENST00000347557 STAG3Q9UJ98 1225 aa18.43■□□□□ 0.54
SMTN-202ENST00000347557 PPRC1Q5VV67 1664 aaKnown RBP18.42■□□□□ 0.54
SMTN-202ENST00000347557 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
SMTN-202ENST00000347557 KIAA1210Q9ULL0 1709 aa18.41■□□□□ 0.54
SMTN-202ENST00000347557 MROH1Q8NDA8 1641 aa18.41■□□□□ 0.54
SMTN-202ENST00000347557 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
SMTN-202ENST00000347557 THUMPD2Q9BTF0 503 aaKnown RBP18.41■□□□□ 0.54
SMTN-202ENST00000347557 DDX19BQ9UMR2 479 aa18.41■□□□□ 0.54
SMTN-202ENST00000347557 HMOX1P09601 288 aa18.4■□□□□ 0.54
SMTN-202ENST00000347557 AAMPQ13685 434 aa18.4■□□□□ 0.54
SMTN-202ENST00000347557 C1orf115Q9H7X2 142 aa18.4■□□□□ 0.54
SMTN-202ENST00000347557 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
SMTN-202ENST00000347557 FYB1O15117 783 aa18.4■□□□□ 0.54
SMTN-202ENST00000347557 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
SMTN-202ENST00000347557 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
SMTN-202ENST00000347557 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
SMTN-202ENST00000347557 ANTXR1Q9H6X2 564 aa18.39■□□□□ 0.53
SMTN-202ENST00000347557 RPGRIP1LQ68CZ1 1315 aa18.39■□□□□ 0.53
SMTN-202ENST00000347557 IQSEC2Q5JU85 1478 aa18.38■□□□□ 0.53
SMTN-202ENST00000347557 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
SMTN-202ENST00000347557 ARAP3Q8WWN8 1544 aa18.38■□□□□ 0.53
SMTN-202ENST00000347557 CD109Q6YHK3 1445 aa18.37■□□□□ 0.53
SMTN-202ENST00000347557 HSCBQ8IWL3 235 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms