RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 UTP3Q9NQZ2 479 aaKnown RBP eCLIP27.93■■■□□ 2.06
NPAS3-201ENST00000346562 FAM69CQ0P6D2 419 aa27.92■■■□□ 2.06
NPAS3-201ENST00000346562 MYOM3Q5VTT5 1437 aa27.92■■■□□ 2.06
NPAS3-201ENST00000346562 NAP1L1P55209 391 aaKnown RBP27.91■■■□□ 2.06
NPAS3-201ENST00000346562 AIMP1Q12904 312 aaKnown RBP27.91■■■□□ 2.06
NPAS3-201ENST00000346562 PHF23Q9BUL5 403 aaPredicted RBP27.91■■■□□ 2.06
NPAS3-201ENST00000346562 EPS15P42566 896 aa27.91■■■□□ 2.06
NPAS3-201ENST00000346562 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.9■■■□□ 2.06
NPAS3-201ENST00000346562 UBTFL1P0CB47 393 aaPredicted RBP27.9■■■□□ 2.06
NPAS3-201ENST00000346562 PATL2C9JE40 543 aaKnown RBP27.9■■■□□ 2.06
NPAS3-201ENST00000346562 NUCB2P80303 420 aa27.9■■■□□ 2.06
NPAS3-201ENST00000346562 AAMPQ13685 434 aa27.89■■■□□ 2.06
NPAS3-201ENST00000346562 CHMP5Q9NZZ3 219 aa27.89■■■□□ 2.06
NPAS3-201ENST00000346562 SLC4A3P48751 1232 aa27.89■■■□□ 2.05
NPAS3-201ENST00000346562 PSMA5P28066 241 aa27.88■■■□□ 2.05
NPAS3-201ENST00000346562 OLFM4Q6UX06 510 aa27.88■■■□□ 2.05
NPAS3-201ENST00000346562 FBXO3Q9UK99 471 aa27.88■■■□□ 2.05
NPAS3-201ENST00000346562 GPRASP1Q5JY77 1395 aa27.88■■■□□ 2.05
NPAS3-201ENST00000346562 FOSBP53539 338 aa27.88■■■□□ 2.05
NPAS3-201ENST00000346562 GSE1Q14687 1217 aa27.88■■■□□ 2.05
NPAS3-201ENST00000346562 RUFY1Q96T51 708 aa27.87■■■□□ 2.05
NPAS3-201ENST00000346562 TBC1D2BQ9UPU7 963 aa27.87■■■□□ 2.05
NPAS3-201ENST00000346562 HMOX1P09601 288 aa27.87■■■□□ 2.05
NPAS3-201ENST00000346562 KIF6Q6ZMV9 814 aa27.87■■■□□ 2.05
NPAS3-201ENST00000346562 TEX35Q5T0J7 233 aa27.87■■■□□ 2.05
NPAS3-201ENST00000346562 AK7Q96M32 723 aa27.87■■■□□ 2.05
NPAS3-201ENST00000346562 SART3Q15020 963 aaKnown RBP27.86■■■□□ 2.05
NPAS3-201ENST00000346562 IKQ13123 557 aaPredicted RBP27.86■■■□□ 2.05
NPAS3-201ENST00000346562 NAT10Q9H0A0 1025 aaKnown RBP27.85■■■□□ 2.05
NPAS3-201ENST00000346562 CNTROBQ8N137 903 aa27.85■■■□□ 2.05
NPAS3-201ENST00000346562 CUX1P39880 1505 aa27.84■■■□□ 2.05
NPAS3-201ENST00000346562 HSP90AA2PQ14568 343 aaPredicted RBP27.84■■■□□ 2.05
NPAS3-201ENST00000346562 RSPH6AQ9H0K4 717 aa27.84■■■□□ 2.05
NPAS3-201ENST00000346562 SMG6Q86US8 1419 aaKnown RBP27.83■■■□□ 2.05
NPAS3-201ENST00000346562 SLC3A2P08195 630 aaKnown RBP27.83■■■□□ 2.05
NPAS3-201ENST00000346562 ACBD3Q9H3P7 528 aa27.83■■■□□ 2.05
NPAS3-201ENST00000346562 CDC45O75419 566 aa27.82■■■□□ 2.04
NPAS3-201ENST00000346562 WWC2Q6AWC2 1192 aa27.82■■■□□ 2.04
NPAS3-201ENST00000346562 RDXP35241 583 aaKnown RBP27.81■■■□□ 2.04
NPAS3-201ENST00000346562 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.8■■■□□ 2.04
NPAS3-201ENST00000346562 FSD1Q9BTV5 496 aa27.8■■■□□ 2.04
NPAS3-201ENST00000346562 CCDC30Q5VVM6 783 aa27.8■■■□□ 2.04
NPAS3-201ENST00000346562 OFD1O75665 1012 aa27.8■■■□□ 2.04
NPAS3-201ENST00000346562 GAS2L2Q8NHY3 880 aa27.8■■■□□ 2.04
NPAS3-201ENST00000346562 NLRP6P59044 892 aa27.8■■■□□ 2.04
NPAS3-201ENST00000346562 CCDC173Q0VFZ6 552 aa27.8■■■□□ 2.04
NPAS3-201ENST00000346562 RRP12Q5JTH9 1297 aaKnown RBP27.79■■■□□ 2.04
NPAS3-201ENST00000346562 NUTM2GQ5VZR2 741 aa27.79■■■□□ 2.04
NPAS3-201ENST00000346562 ARGLU1Q9NWB6 273 aaPredicted RBP27.78■■■□□ 2.04
NPAS3-201ENST00000346562 HSP90AB2PQ58FF8 381 aa27.78■■■□□ 2.04
NPAS3-201ENST00000346562 PLEKHO1Q53GL0 409 aaPredicted RBP27.78■■■□□ 2.04
NPAS3-201ENST00000346562 ZNF771Q7L3S4 317 aaPredicted RBP27.77■■■□□ 2.04
NPAS3-201ENST00000346562 ATAD2BQ9ULI0 1458 aa27.77■■■□□ 2.04
NPAS3-201ENST00000346562 TMEM132AQ24JP5 1023 aa27.77■■■□□ 2.04
NPAS3-201ENST00000346562 MNS1Q8NEH6 495 aa27.77■■■□□ 2.04
NPAS3-201ENST00000346562 GGNBP2Q9H3C7 697 aa27.77■■■□□ 2.04
NPAS3-201ENST00000346562 CABP2Q9NPB3 220 aa27.77■■■□□ 2.04
NPAS3-201ENST00000346562 LNPKQ9C0E8 428 aa27.76■■■□□ 2.03
NPAS3-201ENST00000346562 HIP1O00291 1037 aa27.76■■■□□ 2.03
NPAS3-201ENST00000346562 ZFYVE27Q5T4F4 411 aa27.76■■■□□ 2.03
NPAS3-201ENST00000346562 GNAI3P08754 354 aa27.76■■■□□ 2.03
NPAS3-201ENST00000346562 MTMR7Q9Y216 660 aa27.75■■■□□ 2.03
NPAS3-201ENST00000346562 CCAR1Q8IX12 1150 aaKnown RBP27.74■■■□□ 2.03
NPAS3-201ENST00000346562 GAPVD1Q14C86 1478 aa27.74■■■□□ 2.03
NPAS3-201ENST00000346562 CDK5RAP3Q96JB5 506 aa27.73■■■□□ 2.03
NPAS3-201ENST00000346562 C22orf23Q9BZE7 217 aa27.73■■■□□ 2.03
NPAS3-201ENST00000346562 CLASRPQ8N2M8 674 aaKnown RBP27.73■■■□□ 2.03
NPAS3-201ENST00000346562 GNL3LQ9NVN8 582 aaKnown RBP27.73■■■□□ 2.03
NPAS3-201ENST00000346562 RRBP1Q9P2E9 1410 aaKnown RBP27.73■■■□□ 2.03
NPAS3-201ENST00000346562 FYCO1Q9BQS8 1478 aa27.72■■■□□ 2.03
NPAS3-201ENST00000346562 ERC1Q8IUD2 1116 aa27.72■■■□□ 2.03
NPAS3-201ENST00000346562 MYO6Q9UM54 1294 aa27.72■■■□□ 2.03
NPAS3-201ENST00000346562 IFT57Q9NWB7 429 aa27.72■■■□□ 2.03
NPAS3-201ENST00000346562 RBM42Q9BTD8 480 aaKnown RBP27.72■■■□□ 2.03
NPAS3-201ENST00000346562 PRDM2Q13029 1718 aa27.72■■■□□ 2.03
NPAS3-201ENST00000346562 ABTB2Q8N961 1025 aa27.72■■■□□ 2.03
NPAS3-201ENST00000346562 DNAJC2Q99543 621 aaKnown RBP27.71■■■□□ 2.03
NPAS3-201ENST00000346562 ESCO1Q5FWF5 840 aa27.7■■■□□ 2.03
NPAS3-201ENST00000346562 TXLNAP40222 546 aa27.7■■■□□ 2.02
NPAS3-201ENST00000346562 PDILTQ8N807 584 aa27.7■■■□□ 2.02
NPAS3-201ENST00000346562 TTC39AQ5SRH9 613 aa27.69■■■□□ 2.02
NPAS3-201ENST00000346562 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.69■■■□□ 2.02
NPAS3-201ENST00000346562 CAGE1Q8TC20 777 aa27.69■■■□□ 2.02
NPAS3-201ENST00000346562 LETM1O95202 739 aaPredicted RBP27.68■■■□□ 2.02
NPAS3-201ENST00000346562 FAM177BA6PVY3 158 aa27.68■■■□□ 2.02
NPAS3-201ENST00000346562 SF3B2Q13435 895 aaKnown RBP27.68■■■□□ 2.02
NPAS3-201ENST00000346562 SDF4Q9BRK5 362 aa27.68■■■□□ 2.02
NPAS3-201ENST00000346562 TATP17735 454 aaPredicted RBP27.66■■■□□ 2.02
NPAS3-201ENST00000346562 CCDC158Q5M9N0 1113 aa27.66■■■□□ 2.02
NPAS3-201ENST00000346562 MAGEC2Q9UBF1 373 aaPredicted RBP27.66■■■□□ 2.02
NPAS3-201ENST00000346562 ARHGAP5Q13017 1502 aa27.66■■■□□ 2.02
NPAS3-201ENST00000346562 HSP90B2PQ58FF3 399 aa27.66■■■□□ 2.02
NPAS3-201ENST00000346562 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.65■■■□□ 2.02
NPAS3-201ENST00000346562 CNNM1Q9NRU3 951 aa27.65■■■□□ 2.02
NPAS3-201ENST00000346562 SURF6O75683 361 aaKnown RBP27.65■■■□□ 2.02
NPAS3-201ENST00000346562 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
NPAS3-201ENST00000346562 KIF7Q2M1P5 1343 aa27.65■■■□□ 2.02
NPAS3-201ENST00000346562 PROSER2Q86WR7 435 aaPredicted RBP27.64■■■□□ 2.02
NPAS3-201ENST00000346562 CCDC7Q96M83 1385 aa27.64■■■□□ 2.01
NPAS3-201ENST00000346562 KRT18P05783 430 aaKnown RBP27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms