RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 SPINK5Q9NQ38 1064 aaPredicted RBP9.54□□□□□ -0.88
KPNA1-201ENST00000344337 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
KPNA1-201ENST00000344337 SF3A1Q15459 793 aaKnown RBP9.53□□□□□ -0.88
KPNA1-201ENST00000344337 CHAMP1Q96JM3 812 aa9.53□□□□□ -0.88
KPNA1-201ENST00000344337 CAMK4Q16566 473 aa9.53□□□□□ -0.88
KPNA1-201ENST00000344337 PRKAR2BP31323 418 aa9.53□□□□□ -0.88
KPNA1-201ENST00000344337 TMX1Q9H3N1 280 aa9.53□□□□□ -0.88
KPNA1-201ENST00000344337 XRCC6P12956 609 aaKnown RBP eCLIP9.53□□□□□ -0.88
KPNA1-201ENST00000344337 DIAPH1O60610 1272 aaKnown RBP9.52□□□□□ -0.88
KPNA1-201ENST00000344337 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.88
KPNA1-201ENST00000344337 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.88
KPNA1-201ENST00000344337 BRD4O60885 1362 aaPredicted RBP9.52□□□□□ -0.89
KPNA1-201ENST00000344337 FERMT3Q86UX7 667 aa9.52□□□□□ -0.89
KPNA1-201ENST00000344337 NGDNQ8NEJ9 315 aaKnown RBP9.52□□□□□ -0.89
KPNA1-201ENST00000344337 MYOM3Q5VTT5 1437 aa9.52□□□□□ -0.89
KPNA1-201ENST00000344337 BECN2A8MW95 431 aa9.52□□□□□ -0.89
KPNA1-201ENST00000344337 WWC1Q8IX03 1113 aa9.52□□□□□ -0.89
KPNA1-201ENST00000344337 EXOC6BQ9Y2D4 811 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 AQRO60306 1485 aaKnown RBP eCLIP9.51□□□□□ -0.896e-7■□□□□ 10.8
KPNA1-201ENST00000344337 KANK1Q14678 1352 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 GOLGA6L19H0YKK7 550 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 TNPO1Q92973 898 aaKnown RBP9.51□□□□□ -0.89
KPNA1-201ENST00000344337 ATP2B1P20020 1258 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 DUSP27Q5VZP5 1158 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 HOMER1Q86YM7 354 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 GOLGA6L6A8MZA4 724 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 SIL1Q9H173 461 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 MTMR7Q9Y216 660 aa9.51□□□□□ -0.89
KPNA1-201ENST00000344337 SLFN5Q08AF3 891 aa9.5□□□□□ -0.89
KPNA1-201ENST00000344337 FAM184AQ8NB25 1140 aa9.5□□□□□ -0.89
KPNA1-201ENST00000344337 TSC1Q92574 1164 aa9.5□□□□□ -0.89
KPNA1-201ENST00000344337 CLSTN1O94985 981 aa9.5□□□□□ -0.89
KPNA1-201ENST00000344337 TERF2IPQ9NYB0 399 aa9.5□□□□□ -0.89
KPNA1-201ENST00000344337 C8orf34Q49A92 452 aa9.5□□□□□ -0.89
KPNA1-201ENST00000344337 C16orf71Q8IYS4 520 aaPredicted RBP9.5□□□□□ -0.89
KPNA1-201ENST00000344337 EFCAB2Q5VUJ9 269 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
KPNA1-201ENST00000344337 CSB-PGBD3P0DP91 1061 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.49□□□□□ -0.89
KPNA1-201ENST00000344337 MAPKBP1O60336 1514 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 NAIPQ13075 1403 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 F6X3S4 739 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 RLBP1P12271 317 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 SKOR2Q2VWA4 1001 aaPredicted RBP9.49□□□□□ -0.89
KPNA1-201ENST00000344337 CHMP4BQ9H444 224 aaKnown RBP9.49□□□□□ -0.89
KPNA1-201ENST00000344337 SMC3Q9UQE7 1217 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 SSH1Q8WYL5 1049 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 DIAPH3Q9NSV4 1193 aa9.49□□□□□ -0.89
KPNA1-201ENST00000344337 HMMRO75330 724 aa9.48□□□□□ -0.89
KPNA1-201ENST00000344337 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
KPNA1-201ENST00000344337 CDK13Q14004 1512 aaKnown RBP9.48□□□□□ -0.89
KPNA1-201ENST00000344337 TRIM5Q9C035 493 aa9.48□□□□□ -0.89
KPNA1-201ENST00000344337 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
KPNA1-201ENST00000344337 CHD1LQ86WJ1 897 aa9.48□□□□□ -0.89
KPNA1-201ENST00000344337 ANKRD50Q9ULJ7 1429 aa9.48□□□□□ -0.89
KPNA1-201ENST00000344337 PRG4Q92954 1404 aaPredicted RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 TPD52L1Q16890 204 aaPredicted RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 IBSPP21815 317 aaPredicted RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 C9orf78Q9NZ63 289 aaPredicted RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 PTPRKQ15262 1439 aa9.47□□□□□ -0.89
KPNA1-201ENST00000344337 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 MVPQ14764 893 aaKnown RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 C17orf53Q8N3J3 647 aaPredicted RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 NESP48681 1621 aa9.47□□□□□ -0.89
KPNA1-201ENST00000344337 CFAP65Q6ZU64 1925 aaKnown RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 FAM83GA6ND36 823 aa9.47□□□□□ -0.89
KPNA1-201ENST00000344337 NRDCO43847 1150 aa9.47□□□□□ -0.89
KPNA1-201ENST00000344337 SURF6O75683 361 aaKnown RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 INTS3Q68E01 1043 aaKnown RBP9.47□□□□□ -0.89
KPNA1-201ENST00000344337 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
KPNA1-201ENST00000344337 CADPSQ9ULU8 1353 aa9.46□□□□□ -0.89
KPNA1-201ENST00000344337 USP25Q9UHP3 1055 aa9.46□□□□□ -0.89
KPNA1-201ENST00000344337 SLC4A2P04920 1241 aa9.46□□□□□ -0.9
KPNA1-201ENST00000344337 FILIP1Q7Z7B0 1213 aa9.46□□□□□ -0.9
KPNA1-201ENST00000344337 ISM2Q6H9L7 571 aa9.46□□□□□ -0.9
KPNA1-201ENST00000344337 RARSP54136 660 aaKnown RBP9.46□□□□□ -0.9
KPNA1-201ENST00000344337 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.9
KPNA1-201ENST00000344337 ATF7IPQ6VMQ6 1270 aa9.46□□□□□ -0.9
KPNA1-201ENST00000344337 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.45□□□□□ -0.9
KPNA1-201ENST00000344337 V9GYY5 206 aaPredicted RBP9.45□□□□□ -0.9
KPNA1-201ENST00000344337 CDC45O75419 566 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 TWISTNBQ3B726 338 aaPredicted RBP9.45□□□□□ -0.9
KPNA1-201ENST00000344337 MCM10Q7L590 875 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 PDILTQ8N807 584 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 TAF7LQ5H9L4 462 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 DDX11Q96FC9 970 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
KPNA1-201ENST00000344337 TRMT1Q9NXH9 659 aaKnown RBP9.45□□□□□ -0.9
KPNA1-201ENST00000344337 PHF14O94880 888 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 GUCY1B3Q02153 619 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 UBE2Q2Q8WVN8 375 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 REC8O95072 547 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 APPP05067 770 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 BRPF1P55201 1214 aaPredicted RBP9.45□□□□□ -0.9
KPNA1-201ENST00000344337 COG3Q96JB2 828 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 FANCD2Q9BXW9 1451 aa9.45□□□□□ -0.9
KPNA1-201ENST00000344337 RASSF8Q8NHQ8 419 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 JARID2Q92833 1246 aaPredicted RBP9.44□□□□□ -0.9
KPNA1-201ENST00000344337 TCEANC2Q96MN5 208 aa9.44□□□□□ -0.9
KPNA1-201ENST00000344337 CABP1Q9NZU7 370 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms