RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 AHDC1Q5TGY3 1603 aaPredicted RBP32.48■■■□□ 2.79
PBX1-201ENST00000340699 CDC42BPGQ6DT37 1551 aa32.47■■■□□ 2.79
PBX1-201ENST00000340699 PRAM1Q96QH2 718 aa32.47■■■□□ 2.79
PBX1-201ENST00000340699 DLC1Q96QB1 1528 aa32.46■■■□□ 2.79
PBX1-201ENST00000340699 MED1Q15648 1581 aaPredicted RBP32.45■■■□□ 2.79
PBX1-201ENST00000340699 L3MBTL2Q969R5 705 aa32.45■■■□□ 2.79
PBX1-201ENST00000340699 SAFB2Q14151 953 aaKnown RBP eCLIP32.43■■■□□ 2.78
PBX1-201ENST00000340699 COL16A1Q07092 1604 aaPredicted RBP32.43■■■□□ 2.78
PBX1-201ENST00000340699 JCADQ9P266 1359 aa32.43■■■□□ 2.78
PBX1-201ENST00000340699 ORAI2Q96SN7 254 aa32.41■■■□□ 2.78
PBX1-201ENST00000340699 KIAA1210Q9ULL0 1709 aa32.4■■■□□ 2.78
PBX1-201ENST00000340699 NUTM2FA1L443 756 aa32.38■■■□□ 2.77
PBX1-201ENST00000340699 ESCO1Q5FWF5 840 aa32.38■■■□□ 2.77
PBX1-201ENST00000340699 NHSL1Q5SYE7 1610 aa32.37■■■□□ 2.77
PBX1-201ENST00000340699 PHF23Q9BUL5 403 aaPredicted RBP32.37■■■□□ 2.77
PBX1-201ENST00000340699 DDX17Q92841 729 aaKnown RBP32.35■■■□□ 2.77
PBX1-201ENST00000340699 LRRC59Q96AG4 307 aaKnown RBP32.34■■■□□ 2.77
PBX1-201ENST00000340699 FMN2Q9NZ56 1722 aa32.32■■■□□ 2.76
PBX1-201ENST00000340699 NBPF1Q3BBV0 1214 aa32.32■■■□□ 2.76
PBX1-201ENST00000340699 PCGF6Q9BYE7 350 aa32.32■■■□□ 2.76
PBX1-201ENST00000340699 MINK1Q8N4C8 1332 aaPredicted RBP32.29■■■□□ 2.76
PBX1-201ENST00000340699 SPATA31A6Q5VVP1 1343 aa32.28■■■□□ 2.76
PBX1-201ENST00000340699 HIRIP3Q9BW71 556 aaPredicted RBP32.28■■■□□ 2.76
PBX1-201ENST00000340699 ARHGEF28Q8N1W1 1705 aaKnown RBP32.27■■■□□ 2.76
PBX1-201ENST00000340699 TONSLQ96HA7 1378 aa32.27■■■□□ 2.76
PBX1-201ENST00000340699 SHPRHQ149N8 1683 aa32.27■■■□□ 2.76
PBX1-201ENST00000340699 NPHP3Q7Z494 1330 aa32.26■■■□□ 2.76
PBX1-201ENST00000340699 SOS2Q07890 1332 aaPredicted RBP32.25■■■□□ 2.75
PBX1-201ENST00000340699 ADGRB2O60241 1585 aa32.24■■■□□ 2.75
PBX1-201ENST00000340699 FOXO3O43524 673 aa32.23■■■□□ 2.75
PBX1-201ENST00000340699 EIF3AQ14152 1382 aaKnown RBP32.21■■■□□ 2.75
PBX1-201ENST00000340699 WASLO00401 505 aaPredicted RBP32.2■■■□□ 2.75
PBX1-201ENST00000340699 ILDR2Q71H61 639 aa32.2■■■□□ 2.75
PBX1-201ENST00000340699 KIF1AQ12756 1690 aa32.19■■■□□ 2.74
PBX1-201ENST00000340699 MEX3CQ5U5Q3 659 aaKnown RBP32.19■■■□□ 2.74
PBX1-201ENST00000340699 PHF8Q9UPP1 1060 aa32.19■■■□□ 2.74
PBX1-201ENST00000340699 RGPD8O14715 1765 aaPredicted RBP32.19■■■□□ 2.74
PBX1-201ENST00000340699 TRPM1Q7Z4N2 1603 aa32.18■■■□□ 2.74
PBX1-201ENST00000340699 ANKARQ7Z5J8 1434 aa32.18■■■□□ 2.74
PBX1-201ENST00000340699 NUTM2BA6NNL0 878 aaPredicted RBP32.18■■■□□ 2.74
PBX1-201ENST00000340699 NUTM2EB1AL46 878 aaPredicted RBP32.18■■■□□ 2.74
PBX1-201ENST00000340699 NUTM2AQ8IVF1 878 aaPredicted RBP32.18■■■□□ 2.74
PBX1-201ENST00000340699 ROCK2O75116 1388 aaKnown RBP32.17■■■□□ 2.74
PBX1-201ENST00000340699 PNPLA6Q8IY17 1366 aa32.16■■■□□ 2.74
PBX1-201ENST00000340699 XPCQ01831 940 aaPredicted RBP32.15■■■□□ 2.74
PBX1-201ENST00000340699 NBPF8Q3BBV2 869 aa32.14■■■□□ 2.74
PBX1-201ENST00000340699 CENPJQ9HC77 1338 aaPredicted RBP32.13■■■□□ 2.73
PBX1-201ENST00000340699 LRP6O75581 1613 aa32.12■■■□□ 2.73
PBX1-201ENST00000340699 TULP4Q9NRJ4 1543 aa32.12■■■□□ 2.73
PBX1-201ENST00000340699 PXDNQ92626 1479 aa32.12■■■□□ 2.73
PBX1-201ENST00000340699 KRT28Q7Z3Y7 464 aa32.11■■■□□ 2.73
PBX1-201ENST00000340699 USP32Q8NFA0 1604 aa32.11■■■□□ 2.73
PBX1-201ENST00000340699 PSME1Q06323 249 aa32.1■■■□□ 2.73
PBX1-201ENST00000340699 PMFBP1Q8TBY8 1022 aa32.1■■■□□ 2.73
PBX1-201ENST00000340699 CDK19Q9BWU1 502 aa32.1■■■□□ 2.73
PBX1-201ENST00000340699 RGS17Q9UGC6 210 aaPredicted RBP32.09■■■□□ 2.73
PBX1-201ENST00000340699 PRR36Q9H6K5 1346 aa32.07■■■□□ 2.72
PBX1-201ENST00000340699 NUDT16Q96DE0 195 aaKnown RBP32.05■■■□□ 2.72
PBX1-201ENST00000340699 CLSPNQ9HAW4 1339 aa32.03■■■□□ 2.72
PBX1-201ENST00000340699 CARD11Q9BXL7 1154 aa32.02■■■□□ 2.72
PBX1-201ENST00000340699 QRICH2Q9H0J4 1663 aa32.02■■■□□ 2.72
PBX1-201ENST00000340699 SPATA31A3Q5VYP0 1347 aa32.01■■■□□ 2.72
PBX1-201ENST00000340699 NGDNQ8NEJ9 315 aaKnown RBP32.01■■■□□ 2.71
PBX1-201ENST00000340699 GPRASP1Q5JY77 1395 aa32.01■■■□□ 2.71
PBX1-201ENST00000340699 SRPK2P78362 688 aaKnown RBP32■■■□□ 2.71
PBX1-201ENST00000340699 ITSN1Q15811 1721 aa32■■■□□ 2.71
PBX1-201ENST00000340699 COL22A1Q8NFW1 1626 aaPredicted RBP32■■■□□ 2.71
PBX1-201ENST00000340699 ATP7BP35670 1465 aa31.98■■■□□ 2.71
PBX1-201ENST00000340699 ADAMTS2O95450 1211 aa31.98■■■□□ 2.71
PBX1-201ENST00000340699 ZNF772Q68DY9 489 aaPredicted RBP31.98■■■□□ 2.71
PBX1-201ENST00000340699 RALGAPBQ86X10 1494 aa31.97■■■□□ 2.71
PBX1-201ENST00000340699 SBNO1A3KN83 1393 aa31.97■■■□□ 2.71
PBX1-201ENST00000340699 C8orf37Q96NL8 207 aa31.97■■■□□ 2.71
PBX1-201ENST00000340699 CCDC61Q9Y6R9 512 aa31.97■■■□□ 2.71
PBX1-201ENST00000340699 LMOD2Q6P5Q4 547 aa31.96■■■□□ 2.71
PBX1-201ENST00000340699 POTEAQ6S8J7 498 aa31.96■■■□□ 2.71
PBX1-201ENST00000340699 TNS3Q68CZ2 1445 aa31.95■■■□□ 2.71
PBX1-201ENST00000340699 CCER1Q8TC90 406 aaPredicted RBP31.94■■■□□ 2.7
PBX1-201ENST00000340699 EVC2Q86UK5 1308 aa31.94■■■□□ 2.7
PBX1-201ENST00000340699 CABP2Q9NPB3 220 aa31.93■■■□□ 2.7
PBX1-201ENST00000340699 TIMELESSQ9UNS1 1208 aa31.93■■■□□ 2.7
PBX1-201ENST00000340699 NGLY1Q96IV0 654 aa31.92■■■□□ 2.7
PBX1-201ENST00000340699 AFF2P51816 1311 aa31.92■■■□□ 2.7
PBX1-201ENST00000340699 ARHGEF10O15013 1369 aa31.91■■■□□ 2.7
PBX1-201ENST00000340699 SOCS7O14512 581 aa31.9■■■□□ 2.7
PBX1-201ENST00000340699 PLEKHG3A1L390 1219 aa31.89■■■□□ 2.7
PBX1-201ENST00000340699 HAP1P54257 671 aaPredicted RBP31.89■■■□□ 2.7
PBX1-201ENST00000340699 TOPAZ1Q8N9V7 1692 aa31.88■■■□□ 2.69
PBX1-201ENST00000340699 PAK3O75914 559 aaPredicted RBP31.87■■■□□ 2.69
PBX1-201ENST00000340699 ACEP12821 1306 aa31.86■■■□□ 2.69
PBX1-201ENST00000340699 PPIP5K1Q6PFW1 1433 aa31.85■■■□□ 2.69
PBX1-201ENST00000340699 PLEKHG5O94827 1062 aa31.85■■■□□ 2.69
PBX1-201ENST00000340699 TRPM3Q9HCF6 1732 aaPredicted RBP31.85■■■□□ 2.69
PBX1-201ENST00000340699 POLR3AO14802 1390 aaPredicted RBP31.84■■■□□ 2.69
PBX1-201ENST00000340699 CABLES1Q8TDN4 633 aa31.81■■■□□ 2.68
PBX1-201ENST00000340699 SBNO2Q9Y2G9 1366 aa31.81■■■□□ 2.68
PBX1-201ENST00000340699 CABP1Q9NZU7 370 aa31.8■■■□□ 2.68
PBX1-201ENST00000340699 MARF1Q9Y4F3 1742 aaKnown RBP31.8■■■□□ 2.68
PBX1-201ENST00000340699 USP21Q9UK80 565 aa31.79■■■□□ 2.68
PBX1-201ENST00000340699 RXRBP28702 533 aa31.78■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms