RNA–Protein interactions for RNA: ENST00000338402.6

SNRPEP3-201, Transcript of small nuclear ribonucleoprotein polypeptide E pseudogene 3, humanhuman

BASIC

Gene SNRPEP3, Length 276 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP3-201ENST00000338402 TSC1Q92574 1164 aa7.68□□□□□ -1.18
SNRPEP3-201ENST00000338402 COG6Q9Y2V7 657 aa7.68□□□□□ -1.18
SNRPEP3-201ENST00000338402 USP17L8P0C7I0 530 aa7.67□□□□□ -1.18
SNRPEP3-201ENST00000338402 MTMR14Q8NCE2 650 aa7.67□□□□□ -1.18
SNRPEP3-201ENST00000338402 ANKK1Q8NFD2 765 aa7.67□□□□□ -1.18
SNRPEP3-201ENST00000338402 HRO43593 1189 aa7.66□□□□□ -1.18
SNRPEP3-201ENST00000338402 WWC1Q8IX03 1113 aa7.66□□□□□ -1.18
SNRPEP3-201ENST00000338402 HELBQ8NG08 1087 aaPredicted RBP7.66□□□□□ -1.18
SNRPEP3-201ENST00000338402 PRR14Q9BWN1 585 aa7.66□□□□□ -1.18
SNRPEP3-201ENST00000338402 C1orf115Q9H7X2 142 aa7.66□□□□□ -1.18
SNRPEP3-201ENST00000338402 PPP4CP60510 307 aa7.65□□□□□ -1.18
SNRPEP3-201ENST00000338402 LCE2DQ5TA82 110 aaPredicted RBP7.65□□□□□ -1.18
SNRPEP3-201ENST00000338402 GDPD2Q9HCC8 539 aa7.65□□□□□ -1.18
SNRPEP3-201ENST00000338402 ZNF777Q9ULD5 760 aaPredicted RBP7.65□□□□□ -1.18
SNRPEP3-201ENST00000338402 SOCS7O14512 581 aa7.64□□□□□ -1.19
SNRPEP3-201ENST00000338402 ACTN4O43707 911 aaKnown RBP7.64□□□□□ -1.19
SNRPEP3-201ENST00000338402 PUS10Q3MIT2 529 aaKnown RBP7.64□□□□□ -1.19
SNRPEP3-201ENST00000338402 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
SNRPEP3-201ENST00000338402 HPS5Q9UPZ3 1129 aa7.64□□□□□ -1.19
SNRPEP3-201ENST00000338402 SOWAHBA6NEL2 793 aa7.63□□□□□ -1.19
SNRPEP3-201ENST00000338402 CTDSPL2Q05D32 466 aa7.63□□□□□ -1.19
SNRPEP3-201ENST00000338402 SYMPKQ92797 1274 aaKnown RBP7.63□□□□□ -1.19
SNRPEP3-201ENST00000338402 WNT2BQ93097 391 aa7.63□□□□□ -1.19
SNRPEP3-201ENST00000338402 ZNF330Q9Y3S2 320 aaPredicted RBP7.63□□□□□ -1.19
SNRPEP3-201ENST00000338402 CFAP99D6REC4 459 aa7.62□□□□□ -1.19
SNRPEP3-201ENST00000338402 ABL2P42684 1182 aa7.62□□□□□ -1.19
SNRPEP3-201ENST00000338402 BCAMP50895 628 aa7.62□□□□□ -1.19
SNRPEP3-201ENST00000338402 Q3C1V9 767 aa7.62□□□□□ -1.19
SNRPEP3-201ENST00000338402 MORN1Q5T089 497 aa7.62□□□□□ -1.19
SNRPEP3-201ENST00000338402 TBC1D2BQ9UPU7 963 aa7.62□□□□□ -1.19
SNRPEP3-201ENST00000338402 RETREG3Q86VR2 466 aa7.61□□□□□ -1.19
SNRPEP3-201ENST00000338402 PRR7Q8TB68 274 aa7.61□□□□□ -1.19
SNRPEP3-201ENST00000338402 TSR3Q9UJK0 312 aaKnown RBP7.61□□□□□ -1.19
SNRPEP3-201ENST00000338402 SLC27A5Q9Y2P5 690 aa7.61□□□□□ -1.19
SNRPEP3-201ENST00000338402 CCDC82Q8N4S0 544 aa7.6□□□□□ -1.19
SNRPEP3-201ENST00000338402 NDUFB9Q9Y6M9 179 aa7.6□□□□□ -1.19
SNRPEP3-201ENST00000338402 LRRN4Q8WUT4 740 aa7.59□□□□□ -1.19
SNRPEP3-201ENST00000338402 HMX1Q9NP08 348 aaPredicted RBP7.59□□□□□ -1.19
SNRPEP3-201ENST00000338402 PCDHB3Q9Y5E6 796 aa7.59□□□□□ -1.19
SNRPEP3-201ENST00000338402 APLP1P51693 650 aa7.58□□□□□ -1.2
SNRPEP3-201ENST00000338402 CCDC97Q96F63 343 aaPredicted RBP7.58□□□□□ -1.2
SNRPEP3-201ENST00000338402 GJD4Q96KN9 370 aaPredicted RBP7.58□□□□□ -1.2
SNRPEP3-201ENST00000338402 NR1I2O75469 434 aa7.57□□□□□ -1.2
SNRPEP3-201ENST00000338402 FMNL1O95466 1100 aaPredicted RBP7.56□□□□□ -1.2
SNRPEP3-201ENST00000338402 BLOC1S3Q6QNY0 202 aa7.56□□□□□ -1.2
SNRPEP3-201ENST00000338402 RNF19BQ6ZMZ0 732 aa7.56□□□□□ -1.2
SNRPEP3-201ENST00000338402 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
SNRPEP3-201ENST00000338402 USB1Q9BQ65 265 aaKnown RBP7.56□□□□□ -1.2
SNRPEP3-201ENST00000338402 SERPINA10Q9UK55 444 aa7.56□□□□□ -1.2
SNRPEP3-201ENST00000338402 DESI1Q6ICB0 168 aa7.55□□□□□ -1.2
SNRPEP3-201ENST00000338402 TRIM34Q9BYJ4 488 aa7.55□□□□□ -1.2
SNRPEP3-201ENST00000338402 PLSCR2Q9NRY7 297 aa7.55□□□□□ -1.2
SNRPEP3-201ENST00000338402 WBP1LQ9NX94 342 aa7.55□□□□□ -1.2
SNRPEP3-201ENST00000338402 SALL2Q9Y467 1007 aaPredicted RBP7.55□□□□□ -1.2
SNRPEP3-201ENST00000338402 PER1O15534 1290 aaPredicted RBP7.54□□□□□ -1.2
SNRPEP3-201ENST00000338402 WASHC4Q2M389 1173 aa7.54□□□□□ -1.2
SNRPEP3-201ENST00000338402 BRICD5Q6PL45 260 aa7.54□□□□□ -1.2
SNRPEP3-201ENST00000338402 KCTD12Q96CX2 325 aaKnown RBP7.54□□□□□ -1.2
SNRPEP3-201ENST00000338402 CALR3Q96L12 384 aaKnown RBP7.54□□□□□ -1.2
SNRPEP3-201ENST00000338402 KRTAP3-3Q9BYR6 98 aa7.54□□□□□ -1.2
SNRPEP3-201ENST00000338402 KRTAP3-2Q9BYR7 98 aa7.54□□□□□ -1.2
SNRPEP3-201ENST00000338402 NR6A1Q15406 480 aa7.53□□□□□ -1.2
SNRPEP3-201ENST00000338402 THSD4Q6ZMP0 1018 aa7.53□□□□□ -1.2
SNRPEP3-201ENST00000338402 EPS8L1Q8TE68 723 aa7.53□□□□□ -1.2
SNRPEP3-201ENST00000338402 POM121CA8CG34 1229 aa7.52□□□□□ -1.21
SNRPEP3-201ENST00000338402 IRF5Q13568 498 aa7.52□□□□□ -1.21
SNRPEP3-201ENST00000338402 LYPD8Q6UX82 237 aa7.52□□□□□ -1.21
SNRPEP3-201ENST00000338402 PNMA1Q8ND90 353 aa7.52□□□□□ -1.21
SNRPEP3-201ENST00000338402 COPS2P61201 443 aa7.51□□□□□ -1.21
SNRPEP3-201ENST00000338402 GLMNQ92990 594 aa7.51□□□□□ -1.21
SNRPEP3-201ENST00000338402 THAP11Q96EK4 314 aa7.51□□□□□ -1.21
SNRPEP3-201ENST00000338402 VAC14Q08AM6 782 aa7.5□□□□□ -1.21
SNRPEP3-201ENST00000338402 JUNDP17535 347 aa7.49□□□□□ -1.21
SNRPEP3-201ENST00000338402 NYAP1Q6ZVC0 841 aa7.49□□□□□ -1.21
SNRPEP3-201ENST00000338402 SPSB2Q99619 263 aa7.49□□□□□ -1.21
SNRPEP3-201ENST00000338402 GPR37L1O60883 481 aa7.48□□□□□ -1.21
SNRPEP3-201ENST00000338402 PTPN5P54829 565 aa7.48□□□□□ -1.21
SNRPEP3-201ENST00000338402 PTPRNQ16849 979 aa7.48□□□□□ -1.21
SNRPEP3-201ENST00000338402 HDGFL1Q5TGJ6 251 aa7.48□□□□□ -1.21
SNRPEP3-201ENST00000338402 CTHP32929 405 aa7.47□□□□□ -1.21
SNRPEP3-201ENST00000338402 MSS51Q4VC12 460 aa7.47□□□□□ -1.21
SNRPEP3-201ENST00000338402 CDAN1Q8IWY9 1227 aa7.46□□□□□ -1.22
SNRPEP3-201ENST00000338402 ZPR1O75312 459 aa7.45□□□□□ -1.22
SNRPEP3-201ENST00000338402 CCNYL3P0C7X3 344 aa7.45□□□□□ -1.22
SNRPEP3-201ENST00000338402 FAM160A2Q8N612 972 aaPredicted RBP7.45□□□□□ -1.22
SNRPEP3-201ENST00000338402 MAP10Q9P2G4 905 aa7.45□□□□□ -1.22
SNRPEP3-201ENST00000338402 FKBPLQ9UIM3 349 aa7.45□□□□□ -1.22
SNRPEP3-201ENST00000338402 DXOO77932 396 aaKnown RBP7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 ADH1BP00325 375 aa7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 F12P00748 615 aaPredicted RBP7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 SOX11P35716 441 aa7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 POTEGQ6S5H5 508 aa7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 ADAMTS19Q8TE59 1207 aa7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 MTRQ99707 1265 aa7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 NUDT12Q9BQG2 462 aa7.44□□□□□ -1.22
SNRPEP3-201ENST00000338402 POTEMA6NI47 508 aa7.43□□□□□ -1.22
SNRPEP3-201ENST00000338402 TLL1O43897 1013 aa7.43□□□□□ -1.22
SNRPEP3-201ENST00000338402 EIF4G2P78344 907 aaKnown RBP eCLIP7.43□□□□□ -1.22
SNRPEP3-201ENST00000338402 PRDM9Q9NQV7 894 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms