RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 NHSL1Q5SYE7 1610 aa30.53■■■□□ 2.48
RAB28-203ENST00000338176 ADGRB1O14514 1584 aa30.52■■■□□ 2.48
RAB28-203ENST00000338176 CDC42BPGQ6DT37 1551 aa30.51■■■□□ 2.47
RAB28-203ENST00000338176 NUTM2FA1L443 756 aa30.51■■■□□ 2.47
RAB28-203ENST00000338176 SAFB2Q14151 953 aaKnown RBP eCLIP30.5■■■□□ 2.472e-6■■■□□ 16.4
RAB28-203ENST00000338176 PRAM1Q96QH2 718 aa30.48■■■□□ 2.47
RAB28-203ENST00000338176 SIN3AQ96ST3 1273 aa30.47■■■□□ 2.47
RAB28-203ENST00000338176 RGS17Q9UGC6 210 aaPredicted RBP30.47■■■□□ 2.47
RAB28-203ENST00000338176 TRAK1Q9UPV9 953 aa30.46■■■□□ 2.47
RAB28-203ENST00000338176 SIRT1Q96EB6 747 aa30.46■■■□□ 2.47
RAB28-203ENST00000338176 SHPRHQ149N8 1683 aa30.44■■■□□ 2.46
RAB28-203ENST00000338176 TRIM26Q12899 539 aaPredicted RBP30.43■■■□□ 2.46
RAB28-203ENST00000338176 LRP6O75581 1613 aa30.43■■■□□ 2.46
RAB28-203ENST00000338176 ESCO1Q5FWF5 840 aa30.43■■■□□ 2.46
RAB28-203ENST00000338176 STAC3Q96MF2 364 aa30.43■■■□□ 2.46
RAB28-203ENST00000338176 DLC1Q96QB1 1528 aa30.41■■■□□ 2.46
RAB28-203ENST00000338176 FMN2Q9NZ56 1722 aa30.41■■■□□ 2.46
RAB28-203ENST00000338176 POGKQ9P215 609 aa30.4■■■□□ 2.46
RAB28-203ENST00000338176 NEUROD1Q13562 356 aa30.38■■■□□ 2.45
RAB28-203ENST00000338176 NUTM2BA6NNL0 878 aaPredicted RBP30.37■■■□□ 2.45
RAB28-203ENST00000338176 NUTM2EB1AL46 878 aaPredicted RBP30.37■■■□□ 2.45
RAB28-203ENST00000338176 NUTM2AQ8IVF1 878 aaPredicted RBP30.37■■■□□ 2.45
RAB28-203ENST00000338176 LRRC59Q96AG4 307 aaKnown RBP30.37■■■□□ 2.45
RAB28-203ENST00000338176 SPATA31A6Q5VVP1 1343 aa30.36■■■□□ 2.45
RAB28-203ENST00000338176 RGPD8O14715 1765 aaPredicted RBP30.35■■■□□ 2.45
RAB28-203ENST00000338176 L3MBTL2Q969R5 705 aa30.35■■■□□ 2.45
RAB28-203ENST00000338176 HIRIP3Q9BW71 556 aaPredicted RBP30.35■■■□□ 2.45
RAB28-203ENST00000338176 SOS2Q07890 1332 aaPredicted RBP30.34■■■□□ 2.45
RAB28-203ENST00000338176 XPCQ01831 940 aaPredicted RBP30.34■■■□□ 2.45
RAB28-203ENST00000338176 NBPF1Q3BBV0 1214 aa30.33■■■□□ 2.45
RAB28-203ENST00000338176 PNPLA6Q8IY17 1366 aa30.33■■■□□ 2.45
RAB28-203ENST00000338176 FOXO3O43524 673 aa30.33■■■□□ 2.45
RAB28-203ENST00000338176 MINK1Q8N4C8 1332 aaPredicted RBP30.32■■■□□ 2.44
RAB28-203ENST00000338176 POTEAQ6S8J7 498 aa30.32■■■□□ 2.44
RAB28-203ENST00000338176 SOCS7O14512 581 aa30.31■■■□□ 2.44
RAB28-203ENST00000338176 MEX3CQ5U5Q3 659 aaKnown RBP30.31■■■□□ 2.44
RAB28-203ENST00000338176 ARHGEF28Q8N1W1 1705 aaKnown RBP30.3■■■□□ 2.44
RAB28-203ENST00000338176 KIAA1210Q9ULL0 1709 aa30.28■■■□□ 2.44
RAB28-203ENST00000338176 PXDNQ92626 1479 aa30.28■■■□□ 2.44
RAB28-203ENST00000338176 NPHP3Q7Z494 1330 aa30.27■■■□□ 2.44
RAB28-203ENST00000338176 ADGRB2O60241 1585 aa30.26■■■□□ 2.43
RAB28-203ENST00000338176 USP32Q8NFA0 1604 aa30.25■■■□□ 2.43
RAB28-203ENST00000338176 PHF8Q9UPP1 1060 aa30.22■■■□□ 2.43
RAB28-203ENST00000338176 KIF1AQ12756 1690 aa30.21■■■□□ 2.43
RAB28-203ENST00000338176 PRR36Q9H6K5 1346 aa30.2■■■□□ 2.42
RAB28-203ENST00000338176 WASLO00401 505 aaPredicted RBP30.18■■■□□ 2.42
RAB28-203ENST00000338176 PMFBP1Q8TBY8 1022 aa30.18■■■□□ 2.42
RAB28-203ENST00000338176 ADAMTS2O95450 1211 aa30.18■■■□□ 2.42
RAB28-203ENST00000338176 KRT28Q7Z3Y7 464 aa30.17■■■□□ 2.42
RAB28-203ENST00000338176 ANKARQ7Z5J8 1434 aa30.16■■■□□ 2.42
RAB28-203ENST00000338176 C8orf37Q96NL8 207 aa30.15■■■□□ 2.42
RAB28-203ENST00000338176 COL22A1Q8NFW1 1626 aaPredicted RBP30.15■■■□□ 2.42
RAB28-203ENST00000338176 TULP4Q9NRJ4 1543 aa30.14■■■□□ 2.42
RAB28-203ENST00000338176 TRPM1Q7Z4N2 1603 aa30.14■■■□□ 2.41
RAB28-203ENST00000338176 AFF2P51816 1311 aa30.13■■■□□ 2.41
RAB28-203ENST00000338176 NBPF8Q3BBV2 869 aa30.12■■■□□ 2.41
RAB28-203ENST00000338176 SPATA31A3Q5VYP0 1347 aa30.11■■■□□ 2.41
RAB28-203ENST00000338176 ZNF772Q68DY9 489 aaPredicted RBP30.09■■■□□ 2.41
RAB28-203ENST00000338176 CDK19Q9BWU1 502 aa30.09■■■□□ 2.41
RAB28-203ENST00000338176 PSME1Q06323 249 aa30.08■■■□□ 2.41
RAB28-203ENST00000338176 PLEKHG5O94827 1062 aa30.07■■■□□ 2.4
RAB28-203ENST00000338176 EIF3AQ14152 1382 aaKnown RBP30.07■■■□□ 2.4
RAB28-203ENST00000338176 ATP7BP35670 1465 aa30.06■■■□□ 2.4
RAB28-203ENST00000338176 NUDT16Q96DE0 195 aaKnown RBP30.06■■■□□ 2.4
RAB28-203ENST00000338176 NGLY1Q96IV0 654 aa30.05■■■□□ 2.4
RAB28-203ENST00000338176 CENPJQ9HC77 1338 aaPredicted RBP30.05■■■□□ 2.4
RAB28-203ENST00000338176 ROCK2O75116 1388 aaKnown RBP30.04■■■□□ 2.4
RAB28-203ENST00000338176 TNS3Q68CZ2 1445 aa30.04■■■□□ 2.4
RAB28-203ENST00000338176 QRICH2Q9H0J4 1663 aa30.03■■■□□ 2.4
RAB28-203ENST00000338176 TONSLQ96HA7 1378 aa30.03■■■□□ 2.4
RAB28-203ENST00000338176 LMOD2Q6P5Q4 547 aa30.03■■■□□ 2.4
RAB28-203ENST00000338176 CABLES1Q8TDN4 633 aa30.01■■■□□ 2.39
RAB28-203ENST00000338176 SBNO1A3KN83 1393 aa30.01■■■□□ 2.39
RAB28-203ENST00000338176 TRPM3Q9HCF6 1732 aaPredicted RBP30■■■□□ 2.39
RAB28-203ENST00000338176 NGDNQ8NEJ9 315 aaKnown RBP30■■■□□ 2.39
RAB28-203ENST00000338176 PCGF6Q9BYE7 350 aa29.99■■■□□ 2.39
RAB28-203ENST00000338176 ITSN1Q15811 1721 aa29.99■■■□□ 2.39
RAB28-203ENST00000338176 MARF1Q9Y4F3 1742 aaKnown RBP29.98■■■□□ 2.39
RAB28-203ENST00000338176 TOPAZ1Q8N9V7 1692 aa29.96■■■□□ 2.39
RAB28-203ENST00000338176 QTRT2Q9H974 415 aaKnown RBP29.96■■■□□ 2.39
RAB28-203ENST00000338176 CABP2Q9NPB3 220 aa29.96■■■□□ 2.39
RAB28-203ENST00000338176 GPRASP1Q5JY77 1395 aa29.96■■■□□ 2.39
RAB28-203ENST00000338176 RXRBP28702 533 aa29.95■■■□□ 2.38
RAB28-203ENST00000338176 SRPK2P78362 688 aaKnown RBP29.95■■■□□ 2.38
RAB28-203ENST00000338176 USP21Q9UK80 565 aa29.95■■■□□ 2.38
RAB28-203ENST00000338176 FNBP4Q8N3X1 1017 aaPredicted RBP29.93■■■□□ 2.38
RAB28-203ENST00000338176 ALS2Q96Q42 1657 aa29.92■■■□□ 2.38
RAB28-203ENST00000338176 CCDC61Q9Y6R9 512 aa29.92■■■□□ 2.38
RAB28-203ENST00000338176 ABCA3Q99758 1704 aa29.92■■■□□ 2.38
RAB28-203ENST00000338176 ARHGEF10O15013 1369 aa29.91■■■□□ 2.38
RAB28-203ENST00000338176 PAK3O75914 559 aaPredicted RBP29.91■■■□□ 2.38
RAB28-203ENST00000338176 ACEP12821 1306 aa29.91■■■□□ 2.38
RAB28-203ENST00000338176 HAP1P54257 671 aaPredicted RBP29.9■■■□□ 2.38
RAB28-203ENST00000338176 CARD11Q9BXL7 1154 aa29.88■■■□□ 2.37
RAB28-203ENST00000338176 BCL9LQ86UU0 1499 aa29.88■■■□□ 2.37
RAB28-203ENST00000338176 RALGAPBQ86X10 1494 aa29.88■■■□□ 2.37
RAB28-203ENST00000338176 PLEKHG3A1L390 1219 aa29.87■■■□□ 2.37
RAB28-203ENST00000338176 POLR3AO14802 1390 aaPredicted RBP29.87■■■□□ 2.37
RAB28-203ENST00000338176 PPIP5K1Q6PFW1 1433 aa29.87■■■□□ 2.37
RAB28-203ENST00000338176 RBM6P78332 1123 aaKnown RBP29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms