RNA–Protein interactions for RNA: ENST00000335798.8

UBE2E2-201, Transcript of ubiquitin conjugating enzyme E2 E2, humanhuman

TSL 1 (best)

Gene UBE2E2, Length 1,330 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2-201ENST00000335798 EIF3AQ14152 1382 aaKnown RBP27.57■■■□□ 2
UBE2E2-201ENST00000335798 FMN2Q9NZ56 1722 aa27.56■■■□□ 2
UBE2E2-201ENST00000335798 MSH6P52701 1360 aa27.55■■■□□ 2
UBE2E2-201ENST00000335798 POGKQ9P215 609 aa27.55■■■□□ 2
UBE2E2-201ENST00000335798 USP47Q96K76 1375 aa27.54■■■□□ 2
UBE2E2-201ENST00000335798 CENPJQ9HC77 1338 aaPredicted RBP27.54■■■□□ 2
UBE2E2-201ENST00000335798 C19orf44Q9H6X5 657 aa27.53■■■□□ 2
UBE2E2-201ENST00000335798 SAFB2Q14151 953 aaKnown RBP eCLIP27.52■■■□□ 2
UBE2E2-201ENST00000335798 SBNO2Q9Y2G9 1366 aa27.51■■□□□ 1.99
UBE2E2-201ENST00000335798 RGPD8O14715 1765 aaPredicted RBP27.5■■□□□ 1.99
UBE2E2-201ENST00000335798 ZEB1P37275 1124 aaPredicted RBP27.49■■□□□ 1.99
UBE2E2-201ENST00000335798 C14orf37Q86TY3 774 aa27.49■■□□□ 1.99
UBE2E2-201ENST00000335798 TULP4Q9NRJ4 1543 aa27.49■■□□□ 1.99
UBE2E2-201ENST00000335798 USP32Q8NFA0 1604 aa27.48■■□□□ 1.99
UBE2E2-201ENST00000335798 MINK1Q8N4C8 1332 aaPredicted RBP27.47■■□□□ 1.99
UBE2E2-201ENST00000335798 MST1RQ04912 1400 aa27.46■■□□□ 1.99
UBE2E2-201ENST00000335798 ST20-MTHFSA0A0A6YYL1 179 aa27.44■■□□□ 1.98
UBE2E2-201ENST00000335798 CADPS2Q86UW7 1296 aa27.44■■□□□ 1.98
UBE2E2-201ENST00000335798 TESK2Q96S53 571 aa27.43■■□□□ 1.98
UBE2E2-201ENST00000335798 HIRIP3Q9BW71 556 aaPredicted RBP27.43■■□□□ 1.98
UBE2E2-201ENST00000335798 TOPAZ1Q8N9V7 1692 aa27.42■■□□□ 1.98
UBE2E2-201ENST00000335798 ATF3P18847 181 aa27.41■■□□□ 1.98
UBE2E2-201ENST00000335798 ITSN1Q15811 1721 aa27.4■■□□□ 1.98
UBE2E2-201ENST00000335798 WASLO00401 505 aaPredicted RBP27.4■■□□□ 1.98
UBE2E2-201ENST00000335798 C1orf167Q5SNV9 1468 aa27.39■■□□□ 1.98
UBE2E2-201ENST00000335798 ROBO1Q9Y6N7 1651 aa27.39■■□□□ 1.97
UBE2E2-201ENST00000335798 EIF4G2P78344 907 aaKnown RBP eCLIP27.39■■□□□ 1.97
UBE2E2-201ENST00000335798 ATP7BP35670 1465 aa27.37■■□□□ 1.97
UBE2E2-201ENST00000335798 ANKARQ7Z5J8 1434 aa27.37■■□□□ 1.97
UBE2E2-201ENST00000335798 TOM1O60784 492 aa27.37■■□□□ 1.97
UBE2E2-201ENST00000335798 HSPA5P11021 654 aaKnown RBP27.37■■□□□ 1.97
UBE2E2-201ENST00000335798 UBAP1LF5GYI3 381 aa27.36■■□□□ 1.97
UBE2E2-201ENST00000335798 SLAIN2Q9P270 581 aa27.35■■□□□ 1.97
UBE2E2-201ENST00000335798 CDK19Q9BWU1 502 aa27.34■■□□□ 1.97
UBE2E2-201ENST00000335798 KIF1AQ12756 1690 aa27.33■■□□□ 1.97
UBE2E2-201ENST00000335798 EVC2Q86UK5 1308 aa27.32■■□□□ 1.96
UBE2E2-201ENST00000335798 PRR36Q9H6K5 1346 aa27.32■■□□□ 1.96
UBE2E2-201ENST00000335798 NHSL1Q5SYE7 1610 aa27.32■■□□□ 1.96
UBE2E2-201ENST00000335798 DISP3Q9P2K9 1392 aa27.3■■□□□ 1.96
UBE2E2-201ENST00000335798 NUTM2FA1L443 756 aa27.29■■□□□ 1.96
UBE2E2-201ENST00000335798 SLC24A1O60721 1099 aa27.28■■□□□ 1.96
UBE2E2-201ENST00000335798 BRINP3Q76B58 766 aa27.26■■□□□ 1.95
UBE2E2-201ENST00000335798 CABP2Q9NPB3 220 aa27.26■■□□□ 1.95
UBE2E2-201ENST00000335798 MYOM1P52179 1685 aa27.26■■□□□ 1.95
UBE2E2-201ENST00000335798 NUDT16Q96DE0 195 aaKnown RBP27.25■■□□□ 1.95
UBE2E2-201ENST00000335798 ORAI2Q96SN7 254 aa27.25■■□□□ 1.95
UBE2E2-201ENST00000335798 AHDC1Q5TGY3 1603 aaPredicted RBP27.25■■□□□ 1.95
UBE2E2-201ENST00000335798 SRPK2P78362 688 aaKnown RBP27.24■■□□□ 1.95
UBE2E2-201ENST00000335798 TMF1P82094 1093 aa27.23■■□□□ 1.95
UBE2E2-201ENST00000335798 PUS7Q96PZ0 661 aaKnown RBP27.23■■□□□ 1.95
UBE2E2-201ENST00000335798 AKAP12Q02952 1782 aa27.23■■□□□ 1.95
UBE2E2-201ENST00000335798 PIP4K2BP78356 416 aa27.22■■□□□ 1.95
UBE2E2-201ENST00000335798 ATAD2Q6PL18 1390 aa27.21■■□□□ 1.95
UBE2E2-201ENST00000335798 FBXO41Q8TF61 875 aa27.21■■□□□ 1.95
UBE2E2-201ENST00000335798 PHLPP1O60346 1717 aa27.2■■□□□ 1.95
UBE2E2-201ENST00000335798 CCDC61Q9Y6R9 512 aa27.2■■□□□ 1.95
UBE2E2-201ENST00000335798 PPIP5K1Q6PFW1 1433 aa27.2■■□□□ 1.94
UBE2E2-201ENST00000335798 ESCO1Q5FWF5 840 aa27.19■■□□□ 1.94
UBE2E2-201ENST00000335798 COL16A1Q07092 1604 aaPredicted RBP27.18■■□□□ 1.94
UBE2E2-201ENST00000335798 C11orf95C9JLR9 678 aaPredicted RBP27.17■■□□□ 1.94
UBE2E2-201ENST00000335798 PHF8Q9UPP1 1060 aa27.16■■□□□ 1.94
UBE2E2-201ENST00000335798 TRPM3Q9HCF6 1732 aaPredicted RBP27.16■■□□□ 1.94
UBE2E2-201ENST00000335798 POLR3AO14802 1390 aaPredicted RBP27.16■■□□□ 1.94
UBE2E2-201ENST00000335798 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
UBE2E2-201ENST00000335798 MON2Q7Z3U7 1717 aa27.16■■□□□ 1.94
UBE2E2-201ENST00000335798 PXDNQ92626 1479 aa27.15■■□□□ 1.94
UBE2E2-201ENST00000335798 PLEKHG3A1L390 1219 aa27.15■■□□□ 1.94
UBE2E2-201ENST00000335798 CD163L1Q9NR16 1453 aa27.14■■□□□ 1.94
UBE2E2-201ENST00000335798 CDCA8Q53HL2 280 aa27.14■■□□□ 1.93
UBE2E2-201ENST00000335798 PMFBP1Q8TBY8 1022 aa27.13■■□□□ 1.93
UBE2E2-201ENST00000335798 NINLQ9Y2I6 1382 aa27.12■■□□□ 1.93
UBE2E2-201ENST00000335798 NRKQ7Z2Y5 1582 aa27.12■■□□□ 1.93
UBE2E2-201ENST00000335798 DDX17Q92841 729 aaKnown RBP27.11■■□□□ 1.93
UBE2E2-201ENST00000335798 CABP1Q9NZU7 370 aa27.11■■□□□ 1.93
UBE2E2-201ENST00000335798 FOXO3O43524 673 aa27.1■■□□□ 1.93
UBE2E2-201ENST00000335798 CPSF1Q10570 1443 aaKnown RBP27.09■■□□□ 1.93
UBE2E2-201ENST00000335798 NPHP3Q7Z494 1330 aa27.09■■□□□ 1.93
UBE2E2-201ENST00000335798 ACEP12821 1306 aa27.08■■□□□ 1.93
UBE2E2-201ENST00000335798 SOS2Q07890 1332 aaPredicted RBP27.08■■□□□ 1.93
UBE2E2-201ENST00000335798 KIF7Q2M1P5 1343 aa27.08■■□□□ 1.93
UBE2E2-201ENST00000335798 ALS2Q96Q42 1657 aa27.08■■□□□ 1.93
UBE2E2-201ENST00000335798 SLC12A5Q9H2X9 1139 aa27.06■■□□□ 1.92
UBE2E2-201ENST00000335798 CCDC7Q96M83 1385 aa27.05■■□□□ 1.92
UBE2E2-201ENST00000335798 WASHC2AQ641Q2 1341 aa27.04■■□□□ 1.92
UBE2E2-201ENST00000335798 USP6P35125 1406 aa27.03■■□□□ 1.92
UBE2E2-201ENST00000335798 HSPA1LP34931 641 aa27.03■■□□□ 1.92
UBE2E2-201ENST00000335798 NGDNQ8NEJ9 315 aaKnown RBP27.03■■□□□ 1.92
UBE2E2-201ENST00000335798 SHPRHQ149N8 1683 aa27.03■■□□□ 1.92
UBE2E2-201ENST00000335798 SSH2Q76I76 1423 aa27.03■■□□□ 1.92
UBE2E2-201ENST00000335798 TMC1Q8TDI8 760 aa27.02■■□□□ 1.92
UBE2E2-201ENST00000335798 A0A1W2PP64 1363 aa27.02■■□□□ 1.92
UBE2E2-201ENST00000335798 XPCQ01831 940 aaPredicted RBP27.01■■□□□ 1.91
UBE2E2-201ENST00000335798 ANKRD36BQ8N2N9 1353 aa27.01■■□□□ 1.91
UBE2E2-201ENST00000335798 KRT28Q7Z3Y7 464 aa27■■□□□ 1.91
UBE2E2-201ENST00000335798 SBNO1A3KN83 1393 aa27■■□□□ 1.91
UBE2E2-201ENST00000335798 COL22A1Q8NFW1 1626 aaPredicted RBP27■■□□□ 1.91
UBE2E2-201ENST00000335798 PSME1Q06323 249 aa26.99■■□□□ 1.91
UBE2E2-201ENST00000335798 PIK3C2AO00443 1686 aa26.98■■□□□ 1.91
UBE2E2-201ENST00000335798 CRYBG1Q9Y4K1 1723 aa26.98■■□□□ 1.91
UBE2E2-201ENST00000335798 TNS3Q68CZ2 1445 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms