RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 CC2D2BQ6DHV5 1058 aa10.51□□□□□ -0.73
TDP1-201ENST00000335725 MPNDQ8N594 471 aa10.51□□□□□ -0.73
TDP1-201ENST00000335725 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
TDP1-201ENST00000335725 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
TDP1-201ENST00000335725 PPP1R12AO14974 1030 aaPredicted RBP10.5□□□□□ -0.73
TDP1-201ENST00000335725 TBC1D32Q96NH3 1257 aa10.5□□□□□ -0.73
TDP1-201ENST00000335725 SOGA1O94964 1423 aa10.5□□□□□ -0.73
TDP1-201ENST00000335725 KLHL40Q2TBA0 621 aa10.5□□□□□ -0.73
TDP1-201ENST00000335725 TSC1Q92574 1164 aa10.5□□□□□ -0.73
TDP1-201ENST00000335725 SGSM3Q96HU1 749 aa10.5□□□□□ -0.73
TDP1-201ENST00000335725 NOM1Q5C9Z4 860 aaKnown RBP10.5□□□□□ -0.73
TDP1-201ENST00000335725 TRERF1Q96PN7 1200 aa10.5□□□□□ -0.73
TDP1-201ENST00000335725 CCDC7Q96M83 1385 aa10.5□□□□□ -0.73
TDP1-201ENST00000335725 TRDNQ13061 729 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 ZNF526Q8TF50 670 aaPredicted RBP10.49□□□□□ -0.73
TDP1-201ENST00000335725 PIBF1Q8WXW3 757 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 CXorf56Q9H5V9 222 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 STK26Q9P289 416 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 REC8O95072 547 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 LIG1P18858 919 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 HNRNPH2P55795 449 aaKnown RBP10.49□□□□□ -0.73
TDP1-201ENST00000335725 HSCBQ8IWL3 235 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 CTNNA3Q9UI47 895 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 SUFUQ9UMX1 484 aa10.49□□□□□ -0.73
TDP1-201ENST00000335725 CWC15Q9P013 229 aaKnown RBP10.49□□□□□ -0.73
TDP1-201ENST00000335725 JRKLQ9Y4A0 524 aa10.48□□□□□ -0.73
TDP1-201ENST00000335725 NOLC1Q14978 699 aaKnown RBP eCLIP10.48□□□□□ -0.73
TDP1-201ENST00000335725 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.48□□□□□ -0.73
TDP1-201ENST00000335725 ZBTB12Q9Y330 459 aaPredicted RBP10.48□□□□□ -0.73
TDP1-201ENST00000335725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.73
TDP1-201ENST00000335725 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
TDP1-201ENST00000335725 PAIP2Q9BPZ3 127 aaKnown RBP10.47□□□□□ -0.73
TDP1-201ENST00000335725 DDX49Q9Y6V7 483 aaKnown RBP10.47□□□□□ -0.73
TDP1-201ENST00000335725 CTIFO43310 598 aaKnown RBP10.47□□□□□ -0.73
TDP1-201ENST00000335725 MUM1L1Q5H9M0 696 aa10.47□□□□□ -0.73
TDP1-201ENST00000335725 A0A1B0GUL7 405 aa10.47□□□□□ -0.73
TDP1-201ENST00000335725 MPHOSPH10O00566 681 aaKnown RBP10.47□□□□□ -0.73
TDP1-201ENST00000335725 CYP2C19P33261 490 aa10.47□□□□□ -0.73
TDP1-201ENST00000335725 NCOA1Q15788 1441 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 RPAINQ86UA6 219 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.46□□□□□ -0.73
TDP1-201ENST00000335725 PNISRQ8TF01 805 aaKnown RBP10.46□□□□□ -0.73
TDP1-201ENST00000335725 TOMM22Q9NS69 142 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 KIAA1107Q9UPP5 1409 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 ATP6V1AP38606 617 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.73
TDP1-201ENST00000335725 TNPO1Q92973 898 aaKnown RBP10.46□□□□□ -0.73
TDP1-201ENST00000335725 ITFG2Q969R8 447 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 FAM210AQ96ND0 272 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 NBPF3Q9H094 633 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 TMX1Q9H3N1 280 aa10.46□□□□□ -0.73
TDP1-201ENST00000335725 KIF21BO75037 1637 aa10.46□□□□□ -0.74
TDP1-201ENST00000335725 TXLNBQ8N3L3 684 aa10.45□□□□□ -0.74
TDP1-201ENST00000335725 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
TDP1-201ENST00000335725 JARID2Q92833 1246 aaPredicted RBP10.45□□□□□ -0.74
TDP1-201ENST00000335725 TEX35Q5T0J7 233 aa10.45□□□□□ -0.74
TDP1-201ENST00000335725 PPP6R1Q9UPN7 881 aa10.45□□□□□ -0.74
TDP1-201ENST00000335725 CALR3Q96L12 384 aaKnown RBP10.44□□□□□ -0.74
TDP1-201ENST00000335725 NPC1L1Q9UHC9 1359 aa10.44□□□□□ -0.74
TDP1-201ENST00000335725 NLRP1Q9C000 1473 aa10.44□□□□□ -0.74
TDP1-201ENST00000335725 ATP2B1P20020 1258 aa10.44□□□□□ -0.74
TDP1-201ENST00000335725 SRPK2P78362 688 aaKnown RBP10.44□□□□□ -0.74
TDP1-201ENST00000335725 SWT1Q5T5J6 900 aaKnown RBP10.44□□□□□ -0.74
TDP1-201ENST00000335725 NOL10Q9BSC4 688 aaKnown RBP10.44□□□□□ -0.74
TDP1-201ENST00000335725 GSCP56915 257 aaPredicted RBP10.43□□□□□ -0.74
TDP1-201ENST00000335725 RAB3GAP1Q15042 981 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 JMYQ8N9B5 988 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 KIF18AQ8NI77 898 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 SPTLC3Q9NUV7 552 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.43□□□□□ -0.74
TDP1-201ENST00000335725 ROCK2O75116 1388 aaKnown RBP10.43□□□□□ -0.74
TDP1-201ENST00000335725 PLEKHD1A6NEE1 506 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 TNNT1P13805 278 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 DRC1Q96MC2 740 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 CCDC189A1A4V9 331 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 MYO1CO00159 1063 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 TTC31Q49AM3 519 aaPredicted RBP10.43□□□□□ -0.74
TDP1-201ENST00000335725 C20orf194Q5TEA3 1177 aa10.43□□□□□ -0.74
TDP1-201ENST00000335725 CCDC196A0A1B0GTZ2 297 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 KLHL33A6NCF5 533 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 H0YHG0 523 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 PLIN1O60240 522 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 SARNPP82979 210 aaKnown RBP10.42□□□□□ -0.74
TDP1-201ENST00000335725 BIRC2Q13490 618 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 C10orf67Q8IYJ2 551 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
TDP1-201ENST00000335725 ZNF513Q8N8E2 541 aaPredicted RBP10.42□□□□□ -0.74
TDP1-201ENST00000335725 ZNF692Q9BU19 519 aaPredicted RBP10.42□□□□□ -0.74
TDP1-201ENST00000335725 RBSNQ9H1K0 784 aa10.42□□□□□ -0.74
TDP1-201ENST00000335725 FAM177BA6PVY3 158 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 SEC24BO95487 1268 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 RGL3Q3MIN7 710 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 LRPPRCP42704 1394 aaKnown RBP10.41□□□□□ -0.74
TDP1-201ENST00000335725 ABCA5Q8WWZ7 1642 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 GPS2Q13227 327 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 RABEP1Q15276 862 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 ANKRD20A12PQ8NF67 263 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 MAP2K2P36507 400 aa10.41□□□□□ -0.74
TDP1-201ENST00000335725 DNAJC21Q5F1R6 531 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms