RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 XIRP1Q702N8 1843 aaKnown RBP21.32■■□□□ 1
CMC1-201ENST00000334841 TULP4Q9NRJ4 1543 aa21.3■■□□□ 1
CMC1-201ENST00000334841 TESK2Q96S53 571 aa21.3■■□□□ 1
CMC1-201ENST00000334841 HIRIP3Q9BW71 556 aaPredicted RBP21.3■■□□□ 1
CMC1-201ENST00000334841 TMEM94Q12767 1356 aa21.29■■□□□ 1
CMC1-201ENST00000334841 RBM33Q96EV2 1170 aaKnown RBP21.29■■□□□ 1
CMC1-201ENST00000334841 ADGRL3Q9HAR2 1447 aa21.29■■□□□ 1
CMC1-201ENST00000334841 PROSER2Q86WR7 435 aaPredicted RBP21.28■■□□□ 1
CMC1-201ENST00000334841 CDC42BPGQ6DT37 1551 aa21.27■□□□□ 0.99
CMC1-201ENST00000334841 MINK1Q8N4C8 1332 aaPredicted RBP21.27■□□□□ 0.99
CMC1-201ENST00000334841 NCOA3Q9Y6Q9 1424 aa21.25■□□□□ 0.99
CMC1-201ENST00000334841 DISP3Q9P2K9 1392 aa21.24■□□□□ 0.99
CMC1-201ENST00000334841 FMN2Q9NZ56 1722 aa21.21■□□□□ 0.99
CMC1-201ENST00000334841 DCCP43146 1447 aa21.2■□□□□ 0.98
CMC1-201ENST00000334841 C14orf37Q86TY3 774 aa21.19■□□□□ 0.98
CMC1-201ENST00000334841 USP32Q8NFA0 1604 aa21.18■□□□□ 0.98
CMC1-201ENST00000334841 C11orf95C9JLR9 678 aaPredicted RBP21.17■□□□□ 0.98
CMC1-201ENST00000334841 WASLO00401 505 aaPredicted RBP21.17■□□□□ 0.98
CMC1-201ENST00000334841 TMF1P82094 1093 aa21.17■□□□□ 0.98
CMC1-201ENST00000334841 EVC2Q86UK5 1308 aa21.17■□□□□ 0.98
CMC1-201ENST00000334841 MSH6P52701 1360 aa21.17■□□□□ 0.98
CMC1-201ENST00000334841 ATP7BP35670 1465 aa21.16■□□□□ 0.98
CMC1-201ENST00000334841 TOPAZ1Q8N9V7 1692 aa21.15■□□□□ 0.98
CMC1-201ENST00000334841 C19orf44Q9H6X5 657 aa21.15■□□□□ 0.98
CMC1-201ENST00000334841 MYOM1P52179 1685 aa21.15■□□□□ 0.98
CMC1-201ENST00000334841 SLC24A1O60721 1099 aa21.14■□□□□ 0.97
CMC1-201ENST00000334841 CDK19Q9BWU1 502 aa21.14■□□□□ 0.97
CMC1-201ENST00000334841 KIF7Q2M1P5 1343 aa21.13■□□□□ 0.97
CMC1-201ENST00000334841 CCDC7Q96M83 1385 aa21.12■□□□□ 0.97
CMC1-201ENST00000334841 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
CMC1-201ENST00000334841 CABP2Q9NPB3 220 aa21.12■□□□□ 0.97
CMC1-201ENST00000334841 IQSEC2Q5JU85 1478 aa21.12■□□□□ 0.97
CMC1-201ENST00000334841 MST1RQ04912 1400 aa21.12■□□□□ 0.97
CMC1-201ENST00000334841 ANKARQ7Z5J8 1434 aa21.12■□□□□ 0.97
CMC1-201ENST00000334841 PRR36Q9H6K5 1346 aa21.11■□□□□ 0.97
CMC1-201ENST00000334841 SRPK2P78362 688 aaKnown RBP21.11■□□□□ 0.97
CMC1-201ENST00000334841 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
CMC1-201ENST00000334841 ITSN1Q15811 1721 aa21.09■□□□□ 0.97
CMC1-201ENST00000334841 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
CMC1-201ENST00000334841 NUTM2FA1L443 756 aa21.08■□□□□ 0.97
CMC1-201ENST00000334841 ATF3P18847 181 aa21.08■□□□□ 0.97
CMC1-201ENST00000334841 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
CMC1-201ENST00000334841 PUS7Q96PZ0 661 aaKnown RBP21.08■□□□□ 0.97
CMC1-201ENST00000334841 RGPD8O14715 1765 aaPredicted RBP21.08■□□□□ 0.96
CMC1-201ENST00000334841 C1orf167Q5SNV9 1468 aa21.07■□□□□ 0.96
CMC1-201ENST00000334841 CADPS2Q86UW7 1296 aa21.07■□□□□ 0.96
CMC1-201ENST00000334841 NUDT16Q96DE0 195 aaKnown RBP21.06■□□□□ 0.96
CMC1-201ENST00000334841 CERKQ8TCT0 537 aa21.05■□□□□ 0.96
CMC1-201ENST00000334841 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
CMC1-201ENST00000334841 PPIP5K1Q6PFW1 1433 aa21.04■□□□□ 0.96
CMC1-201ENST00000334841 KIF1AQ12756 1690 aa21.02■□□□□ 0.95
CMC1-201ENST00000334841 CD163L1Q9NR16 1453 aa21.01■□□□□ 0.95
CMC1-201ENST00000334841 NINLQ9Y2I6 1382 aa21.01■□□□□ 0.95
CMC1-201ENST00000334841 CCDC61Q9Y6R9 512 aa21■□□□□ 0.95
CMC1-201ENST00000334841 TMC1Q8TDI8 760 aa20.98■□□□□ 0.95
CMC1-201ENST00000334841 ORAI2Q96SN7 254 aa20.98■□□□□ 0.95
CMC1-201ENST00000334841 SLC12A5Q9H2X9 1139 aa20.98■□□□□ 0.95
CMC1-201ENST00000334841 CABP1Q9NZU7 370 aa20.98■□□□□ 0.95
CMC1-201ENST00000334841 SLAIN2Q9P270 581 aa20.98■□□□□ 0.95
CMC1-201ENST00000334841 AKAP12Q02952 1782 aa20.97■□□□□ 0.95
CMC1-201ENST00000334841 ESCO1Q5FWF5 840 aa20.97■□□□□ 0.95
CMC1-201ENST00000334841 POLR3AO14802 1390 aaPredicted RBP20.97■□□□□ 0.95
CMC1-201ENST00000334841 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
CMC1-201ENST00000334841 MON2Q7Z3U7 1717 aa20.96■□□□□ 0.95
CMC1-201ENST00000334841 A0A1W2PP64 1363 aa20.96■□□□□ 0.95
CMC1-201ENST00000334841 ANKRD36BQ8N2N9 1353 aa20.96■□□□□ 0.95
CMC1-201ENST00000334841 CPSF1Q10570 1443 aaKnown RBP20.95■□□□□ 0.95
CMC1-201ENST00000334841 NRKQ7Z2Y5 1582 aa20.95■□□□□ 0.94
CMC1-201ENST00000334841 PLEKHG3A1L390 1219 aa20.95■□□□□ 0.94
CMC1-201ENST00000334841 PMFBP1Q8TBY8 1022 aa20.95■□□□□ 0.94
CMC1-201ENST00000334841 PHF8Q9UPP1 1060 aa20.95■□□□□ 0.94
CMC1-201ENST00000334841 BRINP3Q76B58 766 aa20.94■□□□□ 0.94
CMC1-201ENST00000334841 NHSL1Q5SYE7 1610 aa20.93■□□□□ 0.94
CMC1-201ENST00000334841 ACEP12821 1306 aa20.93■□□□□ 0.94
CMC1-201ENST00000334841 UBAP1LF5GYI3 381 aa20.92■□□□□ 0.94
CMC1-201ENST00000334841 TOM1O60784 492 aa20.91■□□□□ 0.94
CMC1-201ENST00000334841 USP6P35125 1406 aa20.9■□□□□ 0.94
CMC1-201ENST00000334841 DDX10Q13206 875 aaKnown RBP20.89■□□□□ 0.93
CMC1-201ENST00000334841 NGDNQ8NEJ9 315 aaKnown RBP20.89■□□□□ 0.93
CMC1-201ENST00000334841 PANK3Q9H999 370 aa20.89■□□□□ 0.93
CMC1-201ENST00000334841 TERF2IPQ9NYB0 399 aa20.89■□□□□ 0.93
CMC1-201ENST00000334841 AHDC1Q5TGY3 1603 aaPredicted RBP20.89■□□□□ 0.93
CMC1-201ENST00000334841 PXDNQ92626 1479 aa20.88■□□□□ 0.93
CMC1-201ENST00000334841 KTN1Q86UP2 1357 aaKnown RBP20.88■□□□□ 0.93
CMC1-201ENST00000334841 TRPM3Q9HCF6 1732 aaPredicted RBP20.88■□□□□ 0.93
CMC1-201ENST00000334841 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
CMC1-201ENST00000334841 NSD3Q9BZ95 1437 aa20.87■□□□□ 0.93
CMC1-201ENST00000334841 FOXO3O43524 673 aa20.87■□□□□ 0.93
CMC1-201ENST00000334841 DDX17Q92841 729 aaKnown RBP20.87■□□□□ 0.93
CMC1-201ENST00000334841 CARD14Q9BXL6 1004 aa20.87■□□□□ 0.93
CMC1-201ENST00000334841 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
CMC1-201ENST00000334841 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
CMC1-201ENST00000334841 PIP4K2BP78356 416 aa20.86■□□□□ 0.93
CMC1-201ENST00000334841 NPHP3Q7Z494 1330 aa20.84■□□□□ 0.93
CMC1-201ENST00000334841 XPCQ01831 940 aaPredicted RBP20.83■□□□□ 0.93
CMC1-201ENST00000334841 ZNF692Q9BU19 519 aaPredicted RBP20.83■□□□□ 0.93
CMC1-201ENST00000334841 PIK3C2AO00443 1686 aa20.83■□□□□ 0.92
CMC1-201ENST00000334841 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
CMC1-201ENST00000334841 COL16A1Q07092 1604 aaPredicted RBP20.82■□□□□ 0.92
CMC1-201ENST00000334841 KIF20BQ96Q89 1820 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms