RNA–Protein interactions for RNA: ENST00000328895.8

GKN2-201, Transcript of gastrokine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN2, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN2-201ENST00000328895 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
GKN2-201ENST00000328895 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.42□□□□□ -0.42
GKN2-201ENST00000328895 C6orf229H3BNL8 230 aa12.41□□□□□ -0.42
GKN2-201ENST00000328895 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
GKN2-201ENST00000328895 FAM160A2Q8N612 972 aaPredicted RBP12.4□□□□□ -0.42
GKN2-201ENST00000328895 IL27Q8NEV9 243 aa12.4□□□□□ -0.42
GKN2-201ENST00000328895 RSPH6AQ9H0K4 717 aa12.4□□□□□ -0.42
GKN2-201ENST00000328895 SPTLC1O15269 473 aa12.39□□□□□ -0.43
GKN2-201ENST00000328895 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
GKN2-201ENST00000328895 USB1Q9BQ65 265 aaKnown RBP12.39□□□□□ -0.43
GKN2-201ENST00000328895 POLR3EQ9NVU0 708 aa12.39□□□□□ -0.43
GKN2-201ENST00000328895 PCDHB15Q9Y5E8 787 aa12.39□□□□□ -0.43
GKN2-201ENST00000328895 PPEF1O14829 653 aaPredicted RBP12.38□□□□□ -0.43
GKN2-201ENST00000328895 PRDM9Q9NQV7 894 aa12.38□□□□□ -0.43
GKN2-201ENST00000328895 LIMD1Q9UGP4 676 aa12.38□□□□□ -0.43
GKN2-201ENST00000328895 RNF223E7ERA6 249 aa12.37□□□□□ -0.43
GKN2-201ENST00000328895 GJA5P36382 358 aa12.36□□□□□ -0.43
GKN2-201ENST00000328895 CLK2P49760 499 aaKnown RBP12.36□□□□□ -0.43
GKN2-201ENST00000328895 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
GKN2-201ENST00000328895 MTMR2Q13614 643 aa12.35□□□□□ -0.43
GKN2-201ENST00000328895 MSS51Q4VC12 460 aa12.35□□□□□ -0.43
GKN2-201ENST00000328895 RETREG3Q86VR2 466 aa12.34□□□□□ -0.43
GKN2-201ENST00000328895 CABLES1Q8TDN4 633 aa12.33□□□□□ -0.44
GKN2-201ENST00000328895 SKIV2LQ15477 1246 aaKnown RBP12.32□□□□□ -0.44
GKN2-201ENST00000328895 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
GKN2-201ENST00000328895 HRCP23327 699 aa12.31□□□□□ -0.44
GKN2-201ENST00000328895 ANKLE1Q8NAG6 615 aa12.31□□□□□ -0.44
GKN2-201ENST00000328895 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
GKN2-201ENST00000328895 NUTM2BA6NNL0 878 aaPredicted RBP12.3□□□□□ -0.44
GKN2-201ENST00000328895 NUTM2EB1AL46 878 aaPredicted RBP12.3□□□□□ -0.44
GKN2-201ENST00000328895 QPCTQ16769 361 aa12.3□□□□□ -0.44
GKN2-201ENST00000328895 NUTM2DQ5VT03 806 aaPredicted RBP12.3□□□□□ -0.44
GKN2-201ENST00000328895 NUTM2AQ8IVF1 878 aaPredicted RBP12.3□□□□□ -0.44
GKN2-201ENST00000328895 PRR7Q8TB68 274 aa12.3□□□□□ -0.44
GKN2-201ENST00000328895 SPDYE5A6NIY4 337 aa12.29□□□□□ -0.44
GKN2-201ENST00000328895 PRPF38BQ5VTL8 546 aaKnown RBP12.29□□□□□ -0.44
GKN2-201ENST00000328895 PROCA1Q8NCQ7 364 aaPredicted RBP12.29□□□□□ -0.44
GKN2-201ENST00000328895 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
GKN2-201ENST00000328895 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
GKN2-201ENST00000328895 DXOO77932 396 aaKnown RBP12.27□□□□□ -0.45
GKN2-201ENST00000328895 JUNDP17535 347 aa12.27□□□□□ -0.45
GKN2-201ENST00000328895 MMP16P51512 607 aa12.27□□□□□ -0.45
GKN2-201ENST00000328895 PRKD2Q9BZL6 878 aa12.27□□□□□ -0.45
GKN2-201ENST00000328895 LILRB3O75022 631 aa12.26□□□□□ -0.45
GKN2-201ENST00000328895 RGS20O76081 388 aa12.26□□□□□ -0.45
GKN2-201ENST00000328895 CFAP99D6REC4 459 aa12.25□□□□□ -0.45
GKN2-201ENST00000328895 PLA2G2CQ5R387 149 aa12.25□□□□□ -0.45
GKN2-201ENST00000328895 TSC1Q92574 1164 aa12.25□□□□□ -0.45
GKN2-201ENST00000328895 RTL5Q5HYW3 569 aaPredicted RBP12.24□□□□□ -0.45
GKN2-201ENST00000328895 CCDC24Q8N4L8 307 aa12.24□□□□□ -0.45
GKN2-201ENST00000328895 PCMTD1Q96MG8 357 aaPredicted RBP12.23□□□□□ -0.45
GKN2-201ENST00000328895 SLC19A1P41440 591 aa12.22□□□□□ -0.45
GKN2-201ENST00000328895 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.22□□□□□ -0.45
GKN2-201ENST00000328895 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
GKN2-201ENST00000328895 GOPCQ9HD26 462 aa12.21□□□□□ -0.45
GKN2-201ENST00000328895 LIAT1Q6ZQX7 453 aa12.2□□□□□ -0.46
GKN2-201ENST00000328895 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
GKN2-201ENST00000328895 V9GY48 417 aaPredicted RBP12.2□□□□□ -0.46
GKN2-201ENST00000328895 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
GKN2-201ENST00000328895 DESI1Q6ICB0 168 aa12.19□□□□□ -0.46
GKN2-201ENST00000328895 ZBTB24O43167 697 aaPredicted RBP12.17□□□□□ -0.46
GKN2-201ENST00000328895 PTPRNQ16849 979 aa12.17□□□□□ -0.46
GKN2-201ENST00000328895 CCNYL3P0C7X3 344 aa12.16□□□□□ -0.46
GKN2-201ENST00000328895 HELBQ8NG08 1087 aaPredicted RBP12.16□□□□□ -0.46
GKN2-201ENST00000328895 SPRYD7Q5W111 196 aa12.15□□□□□ -0.46
GKN2-201ENST00000328895 LYPD8Q6UX82 237 aa12.15□□□□□ -0.46
GKN2-201ENST00000328895 PER1O15534 1290 aaPredicted RBP12.14□□□□□ -0.47
GKN2-201ENST00000328895 PPP2R2DQ66LE6 453 aa12.14□□□□□ -0.47
GKN2-201ENST00000328895 RPIAP49247 311 aa12.13□□□□□ -0.47
GKN2-201ENST00000328895 CTHP32929 405 aa12.12□□□□□ -0.47
GKN2-201ENST00000328895 CTDSPL2Q05D32 466 aa12.12□□□□□ -0.47
GKN2-201ENST00000328895 PTCRAQ6ISU1 281 aaPredicted RBP12.12□□□□□ -0.47
GKN2-201ENST00000328895 EVA1BQ9NVM1 165 aa12.12□□□□□ -0.47
GKN2-201ENST00000328895 AP1G2O75843 785 aa12.11□□□□□ -0.47
GKN2-201ENST00000328895 CD2BP2O95400 341 aaKnown RBP12.11□□□□□ -0.47
GKN2-201ENST00000328895 RFC5P40937 340 aa12.11□□□□□ -0.47
GKN2-201ENST00000328895 KCNH2Q12809 1159 aa12.1□□□□□ -0.47
GKN2-201ENST00000328895 TRIM32Q13049 653 aa12.1□□□□□ -0.47
GKN2-201ENST00000328895 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
GKN2-201ENST00000328895 ZNF598Q86UK7 904 aaKnown RBP12.1□□□□□ -0.47
GKN2-201ENST00000328895 MAP10Q9P2G4 905 aa12.08□□□□□ -0.48
GKN2-201ENST00000328895 UNC93B1Q9H1C4 597 aa12.07□□□□□ -0.48
GKN2-201ENST00000328895 LRRN4Q8WUT4 740 aa12.06□□□□□ -0.48
GKN2-201ENST00000328895 F12P00748 615 aaPredicted RBP12.05□□□□□ -0.48
GKN2-201ENST00000328895 IRX2Q9BZI1 471 aaPredicted RBP12.05□□□□□ -0.48
GKN2-201ENST00000328895 FOXC1Q12948 553 aa12.04□□□□□ -0.48
GKN2-201ENST00000328895 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
GKN2-201ENST00000328895 TNFRSF10AO00220 468 aa12.02□□□□□ -0.49
GKN2-201ENST00000328895 USP17L8P0C7I0 530 aa12.02□□□□□ -0.49
GKN2-201ENST00000328895 LINC01559Q495D7 138 aa12.02□□□□□ -0.49
GKN2-201ENST00000328895 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
GKN2-201ENST00000328895 GFRA3O60609 400 aa12.01□□□□□ -0.49
GKN2-201ENST00000328895 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
GKN2-201ENST00000328895 BAP1Q92560 729 aa12.01□□□□□ -0.49
GKN2-201ENST00000328895 SKOR1P84550 965 aa11.99□□□□□ -0.49
GKN2-201ENST00000328895 PKD2L1Q9P0L9 805 aa11.99□□□□□ -0.49
GKN2-201ENST00000328895 GDF9O60383 454 aa11.98□□□□□ -0.49
GKN2-201ENST00000328895 WNT7BP56706 349 aa11.98□□□□□ -0.49
GKN2-201ENST00000328895 SH3BP2P78314 561 aa11.98□□□□□ -0.49
GKN2-201ENST00000328895 NR6A1Q15406 480 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms