RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 PLA2G2CQ5R387 149 aa8.54□□□□□ -1.04
SKP1-201ENST00000328392 ANKLE1Q8NAG6 615 aa8.53□□□□□ -1.04
SKP1-201ENST00000328392 USB1Q9BQ65 265 aaKnown RBP8.52□□□□□ -1.05
SKP1-201ENST00000328392 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
SKP1-201ENST00000328392 LIAT1Q6ZQX7 453 aa8.51□□□□□ -1.05
SKP1-201ENST00000328392 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
SKP1-201ENST00000328392 FCF1Q9Y324 198 aaKnown RBP8.5□□□□□ -1.05
SKP1-201ENST00000328392 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
SKP1-201ENST00000328392 V9GY48 417 aaPredicted RBP8.5□□□□□ -1.05
SKP1-201ENST00000328392 SLC19A1P41440 591 aa8.49□□□□□ -1.05
SKP1-201ENST00000328392 RSBN1LQ6PCB5 846 aaPredicted RBP8.49□□□□□ -1.05
SKP1-201ENST00000328392 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
SKP1-201ENST00000328392 SPTLC1O15269 473 aa8.47□□□□□ -1.05
SKP1-201ENST00000328392 MMP16P51512 607 aa8.47□□□□□ -1.05
SKP1-201ENST00000328392 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
SKP1-201ENST00000328392 RIC3Q7Z5B4 369 aa8.47□□□□□ -1.05
SKP1-201ENST00000328392 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
SKP1-201ENST00000328392 FAM117AQ9C073 453 aa8.47□□□□□ -1.05
SKP1-201ENST00000328392 LIMD1Q9UGP4 676 aa8.47□□□□□ -1.05
SKP1-201ENST00000328392 DXOO77932 396 aaKnown RBP8.46□□□□□ -1.06
SKP1-201ENST00000328392 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
SKP1-201ENST00000328392 SPRYD7Q5W111 196 aa8.46□□□□□ -1.06
SKP1-201ENST00000328392 RETREG3Q86VR2 466 aa8.46□□□□□ -1.06
SKP1-201ENST00000328392 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
SKP1-201ENST00000328392 CABLES1Q8TDN4 633 aa8.44□□□□□ -1.06
SKP1-201ENST00000328392 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
SKP1-201ENST00000328392 PLEKHG3A1L390 1219 aa8.43□□□□□ -1.06
SKP1-201ENST00000328392 JUNDP17535 347 aa8.43□□□□□ -1.06
SKP1-201ENST00000328392 GJA5P36382 358 aa8.43□□□□□ -1.06
SKP1-201ENST00000328392 MTMR2Q13614 643 aa8.43□□□□□ -1.06
SKP1-201ENST00000328392 TRIM67Q6ZTA4 783 aa8.43□□□□□ -1.06
SKP1-201ENST00000328392 PRR7Q8TB68 274 aa8.43□□□□□ -1.06
SKP1-201ENST00000328392 GFRA3O60609 400 aa8.42□□□□□ -1.06
SKP1-201ENST00000328392 HRCP23327 699 aa8.42□□□□□ -1.06
SKP1-201ENST00000328392 NEUROD2Q15784 382 aa8.42□□□□□ -1.06
SKP1-201ENST00000328392 QPCTQ16769 361 aa8.42□□□□□ -1.06
SKP1-201ENST00000328392 CCDC24Q8N4L8 307 aa8.42□□□□□ -1.06
SKP1-201ENST00000328392 ZNF697Q5TEC3 545 aa8.41□□□□□ -1.06
SKP1-201ENST00000328392 ZNF598Q86UK7 904 aaKnown RBP8.41□□□□□ -1.06
SKP1-201ENST00000328392 CFAP99D6REC4 459 aa8.4□□□□□ -1.06
SKP1-201ENST00000328392 BRPF1P55201 1214 aaPredicted RBP8.4□□□□□ -1.06
SKP1-201ENST00000328392 RPIAP49247 311 aa8.39□□□□□ -1.07
SKP1-201ENST00000328392 CLK2P49760 499 aaKnown RBP8.39□□□□□ -1.07
SKP1-201ENST00000328392 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
SKP1-201ENST00000328392 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
SKP1-201ENST00000328392 ZBTB3Q9H5J0 574 aa8.39□□□□□ -1.07
SKP1-201ENST00000328392 PDZRN3Q9UPQ7 1066 aa8.39□□□□□ -1.07
SKP1-201ENST00000328392 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
SKP1-201ENST00000328392 LILRB3O75022 631 aa8.38□□□□□ -1.07
SKP1-201ENST00000328392 RTL5Q5HYW3 569 aaPredicted RBP8.38□□□□□ -1.07
SKP1-201ENST00000328392 PRPF38BQ5VTL8 546 aaKnown RBP8.38□□□□□ -1.07
SKP1-201ENST00000328392 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
SKP1-201ENST00000328392 PROCA1Q8NCQ7 364 aaPredicted RBP8.38□□□□□ -1.07
SKP1-201ENST00000328392 DDRGK1Q96HY6 314 aa8.38□□□□□ -1.07
SKP1-201ENST00000328392 NUDT12Q9BQG2 462 aa8.38□□□□□ -1.07
SKP1-201ENST00000328392 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
SKP1-201ENST00000328392 ZBTB24O43167 697 aaPredicted RBP8.37□□□□□ -1.07
SKP1-201ENST00000328392 NUTM2BA6NNL0 878 aaPredicted RBP8.36□□□□□ -1.07
SKP1-201ENST00000328392 NUTM2EB1AL46 878 aaPredicted RBP8.36□□□□□ -1.07
SKP1-201ENST00000328392 GDF9O60383 454 aa8.36□□□□□ -1.07
SKP1-201ENST00000328392 CD2BP2O95400 341 aaKnown RBP8.36□□□□□ -1.07
SKP1-201ENST00000328392 FOXC1Q12948 553 aa8.36□□□□□ -1.07
SKP1-201ENST00000328392 TRIM32Q13049 653 aa8.36□□□□□ -1.07
SKP1-201ENST00000328392 SKIV2LQ15477 1246 aaKnown RBP8.36□□□□□ -1.07
SKP1-201ENST00000328392 TUSC1Q2TAM9 212 aa8.36□□□□□ -1.07
SKP1-201ENST00000328392 NUTM2DQ5VT03 806 aaPredicted RBP8.36□□□□□ -1.07
SKP1-201ENST00000328392 NUTM2AQ8IVF1 878 aaPredicted RBP8.36□□□□□ -1.07
SKP1-201ENST00000328392 IL27Q8NEV9 243 aa8.36□□□□□ -1.07
SKP1-201ENST00000328392 PKD2L1Q9P0L9 805 aa8.36□□□□□ -1.07
SKP1-201ENST00000328392 PER1O15534 1290 aaPredicted RBP8.35□□□□□ -1.07
SKP1-201ENST00000328392 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
SKP1-201ENST00000328392 SH3D19Q5HYK7 790 aa8.35□□□□□ -1.07
SKP1-201ENST00000328392 NRG2O14511 850 aaPredicted RBP8.34□□□□□ -1.07
SKP1-201ENST00000328392 PTPRNQ16849 979 aa8.34□□□□□ -1.07
SKP1-201ENST00000328392 DESI1Q6ICB0 168 aa8.34□□□□□ -1.07
SKP1-201ENST00000328392 LYPD8Q6UX82 237 aa8.34□□□□□ -1.07
SKP1-201ENST00000328392 TSC1Q92574 1164 aa8.34□□□□□ -1.07
SKP1-201ENST00000328392 LCE2BO14633 110 aa8.33□□□□□ -1.08
SKP1-201ENST00000328392 Q6ZNB5 142 aa8.33□□□□□ -1.08
SKP1-201ENST00000328392 EVA1BQ9NVM1 165 aa8.33□□□□□ -1.08
SKP1-201ENST00000328392 SKOR1P84550 965 aa8.32□□□□□ -1.08
SKP1-201ENST00000328392 PRR20EP86478 221 aa8.32□□□□□ -1.08
SKP1-201ENST00000328392 PRR20CP86479 221 aa8.32□□□□□ -1.08
SKP1-201ENST00000328392 PRR20DP86480 221 aa8.32□□□□□ -1.08
SKP1-201ENST00000328392 PRR20BP86481 221 aa8.32□□□□□ -1.08
SKP1-201ENST00000328392 PRR20AP86496 221 aa8.32□□□□□ -1.08
SKP1-201ENST00000328392 LAPTM4AQ15012 233 aa8.32□□□□□ -1.08
SKP1-201ENST00000328392 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
SKP1-201ENST00000328392 ATP1B4Q9UN42 357 aaPredicted RBP8.32□□□□□ -1.08
SKP1-201ENST00000328392 KCNH2Q12809 1159 aa8.31□□□□□ -1.08
SKP1-201ENST00000328392 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
SKP1-201ENST00000328392 MAP10Q9P2G4 905 aa8.3□□□□□ -1.08
SKP1-201ENST00000328392 CTHP32929 405 aa8.29□□□□□ -1.08
SKP1-201ENST00000328392 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
SKP1-201ENST00000328392 WNT7AO00755 349 aa8.28□□□□□ -1.08
SKP1-201ENST00000328392 F12P00748 615 aaPredicted RBP8.28□□□□□ -1.08
SKP1-201ENST00000328392 CTDSPL2Q05D32 466 aa8.28□□□□□ -1.08
SKP1-201ENST00000328392 RC3H1Q5TC82 1133 aaKnown RBP8.28□□□□□ -1.08
SKP1-201ENST00000328392 BAP1Q92560 729 aa8.28□□□□□ -1.08
SKP1-201ENST00000328392 MRGPRX2Q96LB1 330 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms