RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 NAP1L1P55209 391 aaKnown RBP25.37■■□□□ 1.65
RNF40-201ENST00000324685 HSP90B2PQ58FF3 399 aa25.37■■□□□ 1.65
RNF40-201ENST00000324685 RRP12Q5JTH9 1297 aaKnown RBP25.37■■□□□ 1.65
RNF40-201ENST00000324685 CCDC7Q96M83 1385 aa25.36■■□□□ 1.65
RNF40-201ENST00000324685 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.35■■□□□ 1.65
RNF40-201ENST00000324685 FBXW7Q969H0 707 aa25.35■■□□□ 1.65
RNF40-201ENST00000324685 MIA2Q96PC5 1412 aa25.35■■□□□ 1.65
RNF40-201ENST00000324685 CNTLNQ9NXG0 1405 aa25.35■■□□□ 1.65
RNF40-201ENST00000324685 WIZO95785 1651 aa25.34■■□□□ 1.65
RNF40-201ENST00000324685 MTERF4Q7Z6M4 381 aaKnown RBP25.34■■□□□ 1.65
RNF40-201ENST00000324685 NASPP49321 788 aaPredicted RBP25.33■■□□□ 1.65
RNF40-201ENST00000324685 XBP1P17861 261 aa25.33■■□□□ 1.65
RNF40-201ENST00000324685 NFKBIBQ15653 356 aa25.33■■□□□ 1.65
RNF40-201ENST00000324685 MYOM3Q5VTT5 1437 aa25.33■■□□□ 1.65
RNF40-201ENST00000324685 MSH5O43196 834 aa25.33■■□□□ 1.65
RNF40-201ENST00000324685 PSME1Q06323 249 aa25.32■■□□□ 1.64
RNF40-201ENST00000324685 FOSBP53539 338 aa25.32■■□□□ 1.64
RNF40-201ENST00000324685 CNTROBQ8N137 903 aa25.32■■□□□ 1.64
RNF40-201ENST00000324685 PTPRGP23470 1445 aa25.32■■□□□ 1.64
RNF40-201ENST00000324685 CT47A1Q5JQC4 288 aaPredicted RBP25.32■■□□□ 1.64
RNF40-201ENST00000324685 ERCC4Q92889 916 aaPredicted RBP25.31■■□□□ 1.64
RNF40-201ENST00000324685 UBTFL1P0CB47 393 aaPredicted RBP25.31■■□□□ 1.64
RNF40-201ENST00000324685 RIC3Q7Z5B4 369 aa25.3■■□□□ 1.64
RNF40-201ENST00000324685 MAP7D2Q96T17 732 aa25.3■■□□□ 1.64
RNF40-201ENST00000324685 WASHC4Q2M389 1173 aa25.29■■□□□ 1.64
RNF40-201ENST00000324685 CCDC173Q0VFZ6 552 aa25.29■■□□□ 1.64
RNF40-201ENST00000324685 KIF7Q2M1P5 1343 aa25.29■■□□□ 1.64
RNF40-201ENST00000324685 BRD4O60885 1362 aaPredicted RBP25.28■■□□□ 1.64
RNF40-201ENST00000324685 CUX1P39880 1505 aa25.28■■□□□ 1.64
RNF40-201ENST00000324685 MBD3O95983 291 aa25.28■■□□□ 1.64
RNF40-201ENST00000324685 NEUROD6Q96NK8 337 aa25.28■■□□□ 1.64
RNF40-201ENST00000324685 PANK1Q8TE04 598 aa25.28■■□□□ 1.64
RNF40-201ENST00000324685 EPS15P42566 896 aa25.27■■□□□ 1.64
RNF40-201ENST00000324685 ODF2Q5BJF6 829 aa25.27■■□□□ 1.64
RNF40-201ENST00000324685 CCP110O43303 1012 aa25.27■■□□□ 1.64
RNF40-201ENST00000324685 PDILTQ8N807 584 aa25.26■■□□□ 1.63
RNF40-201ENST00000324685 SDF4Q9BRK5 362 aa25.26■■□□□ 1.63
RNF40-201ENST00000324685 MCM2P49736 904 aa25.26■■□□□ 1.63
RNF40-201ENST00000324685 RAPGEF4Q8WZA2 1011 aa25.26■■□□□ 1.63
RNF40-201ENST00000324685 R3HCC1Q9Y3T6 440 aaKnown RBP25.26■■□□□ 1.63
RNF40-201ENST00000324685 CAGE1Q8TC20 777 aa25.26■■□□□ 1.63
RNF40-201ENST00000324685 RBM33Q96EV2 1170 aaKnown RBP25.25■■□□□ 1.63
RNF40-201ENST00000324685 OFD1O75665 1012 aa25.24■■□□□ 1.63
RNF40-201ENST00000324685 DCTN1Q14203 1278 aa25.24■■□□□ 1.63
RNF40-201ENST00000324685 SYTL4Q96C24 671 aaPredicted RBP25.24■■□□□ 1.63
RNF40-201ENST00000324685 CWC15Q9P013 229 aaKnown RBP25.24■■□□□ 1.63
RNF40-201ENST00000324685 MYO6Q9UM54 1294 aa25.24■■□□□ 1.63
RNF40-201ENST00000324685 HMOX1P09601 288 aa25.24■■□□□ 1.63
RNF40-201ENST00000324685 HIP1O00291 1037 aa25.24■■□□□ 1.63
RNF40-201ENST00000324685 GNAI3P08754 354 aa25.23■■□□□ 1.63
RNF40-201ENST00000324685 CALRP27797 417 aaKnown RBP25.23■■□□□ 1.63
RNF40-201ENST00000324685 FSD1Q9BTV5 496 aa25.23■■□□□ 1.63
RNF40-201ENST00000324685 TSPY26PQ9H489 355 aa25.23■■□□□ 1.63
RNF40-201ENST00000324685 SART3Q15020 963 aaKnown RBP25.22■■□□□ 1.63
RNF40-201ENST00000324685 TRAK2O60296 914 aa25.22■■□□□ 1.63
RNF40-201ENST00000324685 RDXP35241 583 aaKnown RBP25.21■■□□□ 1.63
RNF40-201ENST00000324685 PDCP20941 246 aa25.2■■□□□ 1.63
RNF40-201ENST00000324685 SMARCE1Q969G3 411 aa25.2■■□□□ 1.63
RNF40-201ENST00000324685 TRIM5Q9C035 493 aa25.2■■□□□ 1.62
RNF40-201ENST00000324685 RABEP1Q15276 862 aa25.2■■□□□ 1.62
RNF40-201ENST00000324685 HSP90AB2PQ58FF8 381 aa25.2■■□□□ 1.62
RNF40-201ENST00000324685 CLASRPQ8N2M8 674 aaKnown RBP25.2■■□□□ 1.62
RNF40-201ENST00000324685 KINO60870 393 aaKnown RBP25.19■■□□□ 1.62
RNF40-201ENST00000324685 CCDC30Q5VVM6 783 aa25.19■■□□□ 1.62
RNF40-201ENST00000324685 CCDC27Q2M243 656 aa25.19■■□□□ 1.62
RNF40-201ENST00000324685 FILIP1LQ4L180 1135 aa25.18■■□□□ 1.62
RNF40-201ENST00000324685 AIMP1Q12904 312 aaKnown RBP25.18■■□□□ 1.62
RNF40-201ENST00000324685 TBC1D2BQ9UPU7 963 aa25.18■■□□□ 1.62
RNF40-201ENST00000324685 ZNF396Q96N95 335 aaPredicted RBP25.18■■□□□ 1.62
RNF40-201ENST00000324685 FGD6Q6ZV73 1430 aa25.18■■□□□ 1.62
RNF40-201ENST00000324685 DHX8Q14562 1220 aaKnown RBP25.17■■□□□ 1.62
RNF40-201ENST00000324685 CAVIN1Q6NZI2 390 aaKnown RBP25.17■■□□□ 1.62
RNF40-201ENST00000324685 RNF214Q8ND24 703 aa25.17■■□□□ 1.62
RNF40-201ENST00000324685 PIP4K2AP48426 406 aaPredicted RBP25.17■■□□□ 1.62
RNF40-201ENST00000324685 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.17■■□□□ 1.621e-6■■■■■ 74.2
RNF40-201ENST00000324685 CWC22Q9HCG8 908 aaKnown RBP25.16■■□□□ 1.62
RNF40-201ENST00000324685 SMC2O95347 1197 aa25.16■■□□□ 1.62
RNF40-201ENST00000324685 CNKSR2Q8WXI2 1034 aa25.16■■□□□ 1.62
RNF40-201ENST00000324685 GCC1Q96CN9 775 aa25.16■■□□□ 1.62
RNF40-201ENST00000324685 GGNBP2Q9H3C7 697 aa25.16■■□□□ 1.62
RNF40-201ENST00000324685 FYB1O15117 783 aa25.16■■□□□ 1.62
RNF40-201ENST00000324685 ERC1Q8IUD2 1116 aa25.16■■□□□ 1.62
RNF40-201ENST00000324685 CCDC191Q8NCU4 936 aa25.15■■□□□ 1.62
RNF40-201ENST00000324685 MAGEC2Q9UBF1 373 aaPredicted RBP25.14■■□□□ 1.62
RNF40-201ENST00000324685 GAS2L2Q8NHY3 880 aa25.14■■□□□ 1.61
RNF40-201ENST00000324685 HMGN5P82970 282 aaKnown RBP25.13■■□□□ 1.61
RNF40-201ENST00000324685 CCDC66A2RUB6 948 aa25.13■■□□□ 1.61
RNF40-201ENST00000324685 TXLNAP40222 546 aa25.13■■□□□ 1.61
RNF40-201ENST00000324685 FBXO3Q9UK99 471 aa25.13■■□□□ 1.61
RNF40-201ENST00000324685 ADAMTS8Q9UP79 889 aa25.13■■□□□ 1.61
RNF40-201ENST00000324685 SURF6O75683 361 aaKnown RBP25.12■■□□□ 1.61
RNF40-201ENST00000324685 NEK4P51957 841 aa25.12■■□□□ 1.61
RNF40-201ENST00000324685 H0YHG0 523 aa25.12■■□□□ 1.61
RNF40-201ENST00000324685 ZFYVE27Q5T4F4 411 aa25.11■■□□□ 1.61
RNF40-201ENST00000324685 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
RNF40-201ENST00000324685 PRPF40AO75400 957 aaKnown RBP25.11■■□□□ 1.61
RNF40-201ENST00000324685 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
RNF40-201ENST00000324685 SLC3A2P08195 630 aaKnown RBP25.11■■□□□ 1.61
RNF40-201ENST00000324685 SCAPERQ9BY12 1400 aa25.11■■□□□ 1.61
RNF40-201ENST00000324685 CABP2Q9NPB3 220 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms