RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 C1orf115Q9H7X2 142 aa17.33■□□□□ 0.36
SRRM1-201ENST00000323848 TNNQ9UQP3 1299 aa17.32■□□□□ 0.36
SRRM1-201ENST00000323848 PNNQ9H307 717 aaKnown RBP17.32■□□□□ 0.36
SRRM1-201ENST00000323848 MFAP1P55081 439 aaKnown RBP17.32■□□□□ 0.36
SRRM1-201ENST00000323848 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
SRRM1-201ENST00000323848 CDC42BPAQ5VT25 1732 aa17.31■□□□□ 0.36
SRRM1-201ENST00000323848 DUSP27Q5VZP5 1158 aa17.31■□□□□ 0.36
SRRM1-201ENST00000323848 NUDT16Q96DE0 195 aaKnown RBP17.31■□□□□ 0.36
SRRM1-201ENST00000323848 SLFN5Q08AF3 891 aa17.3■□□□□ 0.36
SRRM1-201ENST00000323848 SULT6B1Q6IMI4 303 aa17.3■□□□□ 0.36
SRRM1-201ENST00000323848 ZKSCAN2Q63HK3 967 aa17.3■□□□□ 0.36
SRRM1-201ENST00000323848 IPO9Q96P70 1041 aaKnown RBP17.3■□□□□ 0.36
SRRM1-201ENST00000323848 MSH5O43196 834 aa17.29■□□□□ 0.36
SRRM1-201ENST00000323848 DEKP35659 375 aaKnown RBP17.29■□□□□ 0.36
SRRM1-201ENST00000323848 ZNF518AQ6AHZ1 1483 aa17.28■□□□□ 0.36
SRRM1-201ENST00000323848 YEATS2Q9ULM3 1422 aa17.28■□□□□ 0.36
SRRM1-201ENST00000323848 CSB-PGBD3P0DP91 1061 aa17.28■□□□□ 0.36
SRRM1-201ENST00000323848 PARD3Q8TEW0 1356 aa17.27■□□□□ 0.36
SRRM1-201ENST00000323848 RWDD1Q9H446 243 aaPredicted RBP17.27■□□□□ 0.36
SRRM1-201ENST00000323848 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.36
SRRM1-201ENST00000323848 RTEL1-TNFRSF6BF6WH68 1400 aa17.27■□□□□ 0.36
SRRM1-201ENST00000323848 PLEKHH1Q9ULM0 1364 aa17.27■□□□□ 0.36
SRRM1-201ENST00000323848 FOXD4L1Q9NU39 408 aa17.27■□□□□ 0.36
SRRM1-201ENST00000323848 DZIP1LQ8IYY4 767 aaKnown RBP17.27■□□□□ 0.35
SRRM1-201ENST00000323848 IPO8O15397 1037 aaKnown RBP17.26■□□□□ 0.35
SRRM1-201ENST00000323848 EIF2S2P20042 333 aaKnown RBP17.26■□□□□ 0.35
SRRM1-201ENST00000323848 RPGRIP1LQ68CZ1 1315 aa17.26■□□□□ 0.35
SRRM1-201ENST00000323848 FYB1O15117 783 aa17.26■□□□□ 0.35
SRRM1-201ENST00000323848 CENPQQ7L2Z9 268 aaPredicted RBP17.26■□□□□ 0.35
SRRM1-201ENST00000323848 FAM83GA6ND36 823 aa17.25■□□□□ 0.35
SRRM1-201ENST00000323848 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
SRRM1-201ENST00000323848 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
SRRM1-201ENST00000323848 ATP7AQ04656 1500 aa17.25■□□□□ 0.35
SRRM1-201ENST00000323848 ABTB2Q8N961 1025 aa17.25■□□□□ 0.35
SRRM1-201ENST00000323848 UHRF1BP1Q6BDS2 1440 aa17.25■□□□□ 0.35
SRRM1-201ENST00000323848 PSME1Q06323 249 aa17.25■□□□□ 0.35
SRRM1-201ENST00000323848 ANKRD45Q5TZF3 282 aa17.25■□□□□ 0.35
SRRM1-201ENST00000323848 ESCO1Q5FWF5 840 aa17.24■□□□□ 0.35
SRRM1-201ENST00000323848 TMPOP42166 694 aaKnown RBP17.24■□□□□ 0.35
SRRM1-201ENST00000323848 CCDC61Q9Y6R9 512 aa17.24■□□□□ 0.35
SRRM1-201ENST00000323848 NGEFQ8N5V2 710 aa17.23■□□□□ 0.35
SRRM1-201ENST00000323848 NOB1Q9ULX3 412 aaKnown RBP17.23■□□□□ 0.35
SRRM1-201ENST00000323848 DDRGK1Q96HY6 314 aa17.23■□□□□ 0.35
SRRM1-201ENST00000323848 MCM10Q7L590 875 aa17.22■□□□□ 0.35
SRRM1-201ENST00000323848 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
SRRM1-201ENST00000323848 USHBP1Q8N6Y0 703 aa17.21■□□□□ 0.35
SRRM1-201ENST00000323848 NPATQ14207 1427 aa17.21■□□□□ 0.35
SRRM1-201ENST00000323848 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
SRRM1-201ENST00000323848 ATP10AO60312 1499 aa17.21■□□□□ 0.35
SRRM1-201ENST00000323848 TAOK2Q9UL54 1235 aa17.2■□□□□ 0.34
SRRM1-201ENST00000323848 MYO5CQ9NQX4 1742 aa17.19■□□□□ 0.34
SRRM1-201ENST00000323848 ADGBQ8N7X0 1667 aa17.19■□□□□ 0.34
SRRM1-201ENST00000323848 MS4A1P11836 297 aa17.19■□□□□ 0.34
SRRM1-201ENST00000323848 WASLO00401 505 aaPredicted RBP17.18■□□□□ 0.34
SRRM1-201ENST00000323848 OS9Q13438 667 aaPredicted RBP17.18■□□□□ 0.34
SRRM1-201ENST00000323848 BECN1Q14457 450 aa17.18■□□□□ 0.34
SRRM1-201ENST00000323848 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
SRRM1-201ENST00000323848 COL17A1Q9UMD9 1497 aaPredicted RBP17.18■□□□□ 0.34
SRRM1-201ENST00000323848 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
SRRM1-201ENST00000323848 SSH1Q8WYL5 1049 aa17.18■□□□□ 0.34
SRRM1-201ENST00000323848 BCORL1Q5H9F3 1711 aa17.17■□□□□ 0.34
SRRM1-201ENST00000323848 MAGI2Q86UL8 1455 aa17.17■□□□□ 0.34
SRRM1-201ENST00000323848 CDC42BPBQ9Y5S2 1711 aa17.17■□□□□ 0.34
SRRM1-201ENST00000323848 MAST1Q9Y2H9 1570 aa17.17■□□□□ 0.34
SRRM1-201ENST00000323848 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
SRRM1-201ENST00000323848 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
SRRM1-201ENST00000323848 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
SRRM1-201ENST00000323848 PREX2Q70Z35 1606 aa17.16■□□□□ 0.34
SRRM1-201ENST00000323848 ARHGEF5Q12774 1597 aa17.16■□□□□ 0.34
SRRM1-201ENST00000323848 HSP90AB2PQ58FF8 381 aa17.15■□□□□ 0.34
SRRM1-201ENST00000323848 TSPYL4Q9UJ04 414 aa17.15■□□□□ 0.34
SRRM1-201ENST00000323848 CCDC9Q9Y3X0 531 aaKnown RBP17.15■□□□□ 0.34
SRRM1-201ENST00000323848 FOXO3O43524 673 aa17.15■□□□□ 0.34
SRRM1-201ENST00000323848 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
SRRM1-201ENST00000323848 GZF1Q9H116 711 aaPredicted RBP17.15■□□□□ 0.34
SRRM1-201ENST00000323848 USP35Q9P2H5 1018 aa17.15■□□□□ 0.34
SRRM1-201ENST00000323848 IGHDP01880 384 aa17.15■□□□□ 0.34
SRRM1-201ENST00000323848 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
SRRM1-201ENST00000323848 CALD1Q05682 793 aaKnown RBP17.14■□□□□ 0.33
SRRM1-201ENST00000323848 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
SRRM1-201ENST00000323848 PHACTR3Q96KR7 559 aa17.14■□□□□ 0.33
SRRM1-201ENST00000323848 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
SRRM1-201ENST00000323848 KRT24Q2M2I5 525 aa17.13■□□□□ 0.33
SRRM1-201ENST00000323848 FANCIQ9NVI1 1328 aa17.13■□□□□ 0.33
SRRM1-201ENST00000323848 RLBP1P12271 317 aa17.13■□□□□ 0.33
SRRM1-201ENST00000323848 ATAD2Q6PL18 1390 aa17.13■□□□□ 0.33
SRRM1-201ENST00000323848 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
SRRM1-201ENST00000323848 KDM5CP41229 1560 aa17.12■□□□□ 0.33
SRRM1-201ENST00000323848 ABCC1P33527 1531 aa17.12■□□□□ 0.33
SRRM1-201ENST00000323848 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
SRRM1-201ENST00000323848 TMEM57Q8N5G2 664 aa17.12■□□□□ 0.33
SRRM1-201ENST00000323848 FKBP5Q13451 457 aaPredicted RBP17.12■□□□□ 0.33
SRRM1-201ENST00000323848 GPRASP1Q5JY77 1395 aa17.11■□□□□ 0.33
SRRM1-201ENST00000323848 BACH2Q9BYV9 841 aa17.11■□□□□ 0.33
SRRM1-201ENST00000323848 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
SRRM1-201ENST00000323848 POGZQ7Z3K3 1410 aa17.1■□□□□ 0.33
SRRM1-201ENST00000323848 ACEP12821 1306 aa17.1■□□□□ 0.33
SRRM1-201ENST00000323848 TSPOAP1O95153 1857 aa17.1■□□□□ 0.33
SRRM1-201ENST00000323848 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
SRRM1-201ENST00000323848 POLKQ9UBT6 870 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms