RNA–Protein interactions for RNA: ENST00000321331.11

HIGD1A-201, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1A, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-201ENST00000321331 TRAK1Q9UPV9 953 aa28.56■■■□□ 2.16
HIGD1A-201ENST00000321331 BRINP3Q76B58 766 aa28.55■■■□□ 2.16
HIGD1A-201ENST00000321331 POGKQ9P215 609 aa28.55■■■□□ 2.16
HIGD1A-201ENST00000321331 C1orf167Q5SNV9 1468 aa28.52■■■□□ 2.16
HIGD1A-201ENST00000321331 PHLPP1O60346 1717 aa28.52■■■□□ 2.16
HIGD1A-201ENST00000321331 TONSLQ96HA7 1378 aa28.51■■■□□ 2.15
HIGD1A-201ENST00000321331 SAFB2Q14151 953 aaKnown RBP eCLIP28.5■■■□□ 2.15
HIGD1A-201ENST00000321331 AHDC1Q5TGY3 1603 aaPredicted RBP28.49■■■□□ 2.15
HIGD1A-201ENST00000321331 NBPF1Q3BBV0 1214 aa28.47■■■□□ 2.15
HIGD1A-201ENST00000321331 ARHGEF28Q8N1W1 1705 aaKnown RBP28.44■■■□□ 2.14
HIGD1A-201ENST00000321331 COL16A1Q07092 1604 aaPredicted RBP28.44■■■□□ 2.14
HIGD1A-201ENST00000321331 ORAI2Q96SN7 254 aa28.43■■■□□ 2.14
HIGD1A-201ENST00000321331 FMN2Q9NZ56 1722 aa28.43■■■□□ 2.14
HIGD1A-201ENST00000321331 NHSL1Q5SYE7 1610 aa28.43■■■□□ 2.14
HIGD1A-201ENST00000321331 NUTM2FA1L443 756 aa28.42■■■□□ 2.14
HIGD1A-201ENST00000321331 ESCO1Q5FWF5 840 aa28.41■■■□□ 2.14
HIGD1A-201ENST00000321331 TRPM1Q7Z4N2 1603 aa28.41■■■□□ 2.14
HIGD1A-201ENST00000321331 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
HIGD1A-201ENST00000321331 CLSPNQ9HAW4 1339 aa28.4■■■□□ 2.14
HIGD1A-201ENST00000321331 JCADQ9P266 1359 aa28.4■■■□□ 2.14
HIGD1A-201ENST00000321331 MINK1Q8N4C8 1332 aaPredicted RBP28.39■■■□□ 2.14
HIGD1A-201ENST00000321331 DISP3Q9P2K9 1392 aa28.38■■■□□ 2.13
HIGD1A-201ENST00000321331 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
HIGD1A-201ENST00000321331 HIRIP3Q9BW71 556 aaPredicted RBP28.37■■■□□ 2.13
HIGD1A-201ENST00000321331 MED1Q15648 1581 aaPredicted RBP28.37■■■□□ 2.13
HIGD1A-201ENST00000321331 NBPF8Q3BBV2 869 aa28.36■■■□□ 2.13
HIGD1A-201ENST00000321331 EIF3AQ14152 1382 aaKnown RBP28.35■■■□□ 2.13
HIGD1A-201ENST00000321331 DDX17Q92841 729 aaKnown RBP28.35■■■□□ 2.13
HIGD1A-201ENST00000321331 LRRC59Q96AG4 307 aaKnown RBP28.33■■■□□ 2.13
HIGD1A-201ENST00000321331 NPHP3Q7Z494 1330 aa28.32■■■□□ 2.12
HIGD1A-201ENST00000321331 WASLO00401 505 aaPredicted RBP28.32■■■□□ 2.12
HIGD1A-201ENST00000321331 ANKARQ7Z5J8 1434 aa28.32■■■□□ 2.12
HIGD1A-201ENST00000321331 CENPJQ9HC77 1338 aaPredicted RBP28.3■■■□□ 2.12
HIGD1A-201ENST00000321331 KIF1AQ12756 1690 aa28.3■■■□□ 2.12
HIGD1A-201ENST00000321331 SOS2Q07890 1332 aaPredicted RBP28.29■■■□□ 2.12
HIGD1A-201ENST00000321331 CCER1Q8TC90 406 aaPredicted RBP28.29■■■□□ 2.12
HIGD1A-201ENST00000321331 SHPRHQ149N8 1683 aa28.29■■■□□ 2.12
HIGD1A-201ENST00000321331 FOXO3O43524 673 aa28.28■■■□□ 2.12
HIGD1A-201ENST00000321331 RGPD8O14715 1765 aaPredicted RBP28.28■■■□□ 2.12
HIGD1A-201ENST00000321331 SPATA31A6Q5VVP1 1343 aa28.28■■■□□ 2.12
HIGD1A-201ENST00000321331 GPRASP1Q5JY77 1395 aa28.27■■■□□ 2.12
HIGD1A-201ENST00000321331 TULP4Q9NRJ4 1543 aa28.27■■■□□ 2.12
HIGD1A-201ENST00000321331 PHF8Q9UPP1 1060 aa28.26■■■□□ 2.12
HIGD1A-201ENST00000321331 RALGAPBQ86X10 1494 aa28.26■■■□□ 2.11
HIGD1A-201ENST00000321331 PHF23Q9BUL5 403 aaPredicted RBP28.25■■■□□ 2.11
HIGD1A-201ENST00000321331 TIMELESSQ9UNS1 1208 aa28.25■■■□□ 2.11
HIGD1A-201ENST00000321331 USP32Q8NFA0 1604 aa28.25■■■□□ 2.11
HIGD1A-201ENST00000321331 CARD11Q9BXL7 1154 aa28.24■■■□□ 2.11
HIGD1A-201ENST00000321331 QRICH2Q9H0J4 1663 aa28.22■■■□□ 2.11
HIGD1A-201ENST00000321331 CDK19Q9BWU1 502 aa28.22■■■□□ 2.11
HIGD1A-201ENST00000321331 PXDNQ92626 1479 aa28.21■■■□□ 2.11
HIGD1A-201ENST00000321331 PRR36Q9H6K5 1346 aa28.21■■■□□ 2.11
HIGD1A-201ENST00000321331 PNPLA6Q8IY17 1366 aa28.2■■■□□ 2.11
HIGD1A-201ENST00000321331 XPCQ01831 940 aaPredicted RBP28.2■■■□□ 2.1
HIGD1A-201ENST00000321331 PMFBP1Q8TBY8 1022 aa28.19■■■□□ 2.1
HIGD1A-201ENST00000321331 NUDT16Q96DE0 195 aaKnown RBP28.18■■■□□ 2.1
HIGD1A-201ENST00000321331 ATP7BP35670 1465 aa28.17■■■□□ 2.1
HIGD1A-201ENST00000321331 KRT28Q7Z3Y7 464 aa28.17■■■□□ 2.1
HIGD1A-201ENST00000321331 ITSN1Q15811 1721 aa28.17■■■□□ 2.1
HIGD1A-201ENST00000321331 PSME1Q06323 249 aa28.16■■■□□ 2.1
HIGD1A-201ENST00000321331 SRPK2P78362 688 aaKnown RBP28.15■■■□□ 2.1
HIGD1A-201ENST00000321331 NUTM2BA6NNL0 878 aaPredicted RBP28.14■■■□□ 2.1
HIGD1A-201ENST00000321331 NUTM2EB1AL46 878 aaPredicted RBP28.14■■■□□ 2.1
HIGD1A-201ENST00000321331 MEX3CQ5U5Q3 659 aaKnown RBP28.14■■■□□ 2.1
HIGD1A-201ENST00000321331 NUTM2AQ8IVF1 878 aaPredicted RBP28.14■■■□□ 2.1
HIGD1A-201ENST00000321331 LRP6O75581 1613 aa28.14■■■□□ 2.1
HIGD1A-201ENST00000321331 CCDC61Q9Y6R9 512 aa28.12■■■□□ 2.09
HIGD1A-201ENST00000321331 EVC2Q86UK5 1308 aa28.12■■■□□ 2.09
HIGD1A-201ENST00000321331 NGDNQ8NEJ9 315 aaKnown RBP28.11■■■□□ 2.09
HIGD1A-201ENST00000321331 SPATA31A3Q5VYP0 1347 aa28.11■■■□□ 2.09
HIGD1A-201ENST00000321331 COL22A1Q8NFW1 1626 aaPredicted RBP28.09■■■□□ 2.09
HIGD1A-201ENST00000321331 CABP2Q9NPB3 220 aa28.09■■■□□ 2.09
HIGD1A-201ENST00000321331 SBNO1A3KN83 1393 aa28.08■■■□□ 2.09
HIGD1A-201ENST00000321331 TOPAZ1Q8N9V7 1692 aa28.08■■■□□ 2.09
HIGD1A-201ENST00000321331 TNS3Q68CZ2 1445 aa28.08■■■□□ 2.09
HIGD1A-201ENST00000321331 SBNO2Q9Y2G9 1366 aa28.07■■■□□ 2.08
HIGD1A-201ENST00000321331 PLEKHG3A1L390 1219 aa28.04■■■□□ 2.08
HIGD1A-201ENST00000321331 LMOD2Q6P5Q4 547 aa28.03■■■□□ 2.08
HIGD1A-201ENST00000321331 RGS17Q9UGC6 210 aaPredicted RBP28.03■■■□□ 2.08
HIGD1A-201ENST00000321331 PPIP5K1Q6PFW1 1433 aa28.03■■■□□ 2.08
HIGD1A-201ENST00000321331 ARHGEF10O15013 1369 aa28.02■■■□□ 2.08
HIGD1A-201ENST00000321331 POLR3AO14802 1390 aaPredicted RBP28.01■■■□□ 2.08
HIGD1A-201ENST00000321331 ILDR2Q71H61 639 aa28.01■■■□□ 2.07
HIGD1A-201ENST00000321331 ACEP12821 1306 aa28.01■■■□□ 2.07
HIGD1A-201ENST00000321331 ADAMTS2O95450 1211 aa28■■■□□ 2.07
HIGD1A-201ENST00000321331 TRPM3Q9HCF6 1732 aaPredicted RBP28■■■□□ 2.07
HIGD1A-201ENST00000321331 C8orf37Q96NL8 207 aa27.99■■■□□ 2.07
HIGD1A-201ENST00000321331 ST20-MTHFSA0A0A6YYL1 179 aa27.98■■■□□ 2.07
HIGD1A-201ENST00000321331 SLC24A1O60721 1099 aa27.98■■■□□ 2.07
HIGD1A-201ENST00000321331 PAK3O75914 559 aaPredicted RBP27.98■■■□□ 2.07
HIGD1A-201ENST00000321331 ZNF772Q68DY9 489 aaPredicted RBP27.98■■■□□ 2.07
HIGD1A-201ENST00000321331 ATAD2Q6PL18 1390 aa27.97■■■□□ 2.07
HIGD1A-201ENST00000321331 CABP1Q9NZU7 370 aa27.97■■■□□ 2.07
HIGD1A-201ENST00000321331 USP47Q96K76 1375 aa27.96■■■□□ 2.07
HIGD1A-201ENST00000321331 HAP1P54257 671 aaPredicted RBP27.95■■■□□ 2.06
HIGD1A-201ENST00000321331 NGLY1Q96IV0 654 aa27.94■■■□□ 2.06
HIGD1A-201ENST00000321331 ALS2Q96Q42 1657 aa27.94■■■□□ 2.06
HIGD1A-201ENST00000321331 AFF2P51816 1311 aa27.93■■■□□ 2.06
HIGD1A-201ENST00000321331 POTEAQ6S8J7 498 aa27.92■■■□□ 2.06
HIGD1A-201ENST00000321331 TESK2Q96S53 571 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms