RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 QRICH2Q9H0J4 1663 aa21.13■□□□□ 0.97
SHISA2-201ENST00000319420 TMEM131LA2VDJ0 1609 aa21.12■□□□□ 0.97
SHISA2-201ENST00000319420 SETBP1Q9Y6X0 1596 aa21.12■□□□□ 0.97
SHISA2-201ENST00000319420 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
SHISA2-201ENST00000319420 NUTM2FA1L443 756 aa21.12■□□□□ 0.97
SHISA2-201ENST00000319420 CDK19Q9BWU1 502 aa21.11■□□□□ 0.97
SHISA2-201ENST00000319420 YTHDC2Q9H6S0 1430 aaKnown RBP21.11■□□□□ 0.97
SHISA2-201ENST00000319420 RIMS2Q9UQ26 1411 aa21.11■□□□□ 0.97
SHISA2-201ENST00000319420 RRP7AQ9Y3A4 280 aaKnown RBP21.11■□□□□ 0.97
SHISA2-201ENST00000319420 MTHFSP49914 203 aa21.1■□□□□ 0.97
SHISA2-201ENST00000319420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.1■□□□□ 0.97
SHISA2-201ENST00000319420 PPP6R1Q9UPN7 881 aa21.1■□□□□ 0.97
SHISA2-201ENST00000319420 CGNL1Q0VF96 1302 aa21.1■□□□□ 0.97
SHISA2-201ENST00000319420 CABP1Q9NZU7 370 aa21.1■□□□□ 0.97
SHISA2-201ENST00000319420 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
SHISA2-201ENST00000319420 FBLN1P23142 703 aa21.08■□□□□ 0.97
SHISA2-201ENST00000319420 A2ML1A8K2U0 1454 aa21.08■□□□□ 0.96
SHISA2-201ENST00000319420 NCKAP5LQ9HCH0 1330 aa21.07■□□□□ 0.96
SHISA2-201ENST00000319420 TULP4Q9NRJ4 1543 aa21.07■□□□□ 0.96
SHISA2-201ENST00000319420 PPM1GO15355 546 aaPredicted RBP21.06■□□□□ 0.96
SHISA2-201ENST00000319420 SLC26A8Q96RN1 970 aa21.06■□□□□ 0.96
SHISA2-201ENST00000319420 AGLP35573 1532 aa21.06■□□□□ 0.96
SHISA2-201ENST00000319420 CCDC136Q96JN2 1154 aa21.06■□□□□ 0.96
SHISA2-201ENST00000319420 ARHGEF40Q8TER5 1519 aa21.05■□□□□ 0.96
SHISA2-201ENST00000319420 BLMP54132 1417 aaPredicted RBP21.05■□□□□ 0.96
SHISA2-201ENST00000319420 A0A1W2PP64 1363 aa21.04■□□□□ 0.96
SHISA2-201ENST00000319420 ZFYVE9O95405 1425 aa21.03■□□□□ 0.96
SHISA2-201ENST00000319420 METP08581 1390 aa21.03■□□□□ 0.96
SHISA2-201ENST00000319420 RRP1P56182 461 aaKnown RBP21.03■□□□□ 0.96
SHISA2-201ENST00000319420 TNRQ92752 1358 aa21.03■□□□□ 0.96
SHISA2-201ENST00000319420 EXOC6Q8TAG9 804 aa21.03■□□□□ 0.96
SHISA2-201ENST00000319420 NPC1L1Q9UHC9 1359 aa21.02■□□□□ 0.96
SHISA2-201ENST00000319420 ALKQ9UM73 1620 aa21.02■□□□□ 0.96
SHISA2-201ENST00000319420 ARHGEF28Q8N1W1 1705 aaKnown RBP21.02■□□□□ 0.96
SHISA2-201ENST00000319420 MYO3AQ8NEV4 1616 aa21.02■□□□□ 0.95
SHISA2-201ENST00000319420 PDE3BQ13370 1112 aa21.02■□□□□ 0.95
SHISA2-201ENST00000319420 SPINK5Q9NQ38 1064 aaPredicted RBP21.02■□□□□ 0.95
SHISA2-201ENST00000319420 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
SHISA2-201ENST00000319420 DMRT2Q9Y5R5 561 aa21.01■□□□□ 0.95
SHISA2-201ENST00000319420 PTPRMP28827 1452 aa21.01■□□□□ 0.95
SHISA2-201ENST00000319420 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
SHISA2-201ENST00000319420 ANP32EQ9BTT0 268 aa21■□□□□ 0.95
SHISA2-201ENST00000319420 TERF2IPQ9NYB0 399 aa21■□□□□ 0.95
SHISA2-201ENST00000319420 GOLGA2Q08379 1002 aa21■□□□□ 0.95
SHISA2-201ENST00000319420 U2AF1L5P0DN76 240 aaPredicted RBP20.99■□□□□ 0.95
SHISA2-201ENST00000319420 LTKP29376 864 aa20.99■□□□□ 0.95
SHISA2-201ENST00000319420 U2AF1Q01081 240 aaKnown RBP eCLIP20.99■□□□□ 0.95
SHISA2-201ENST00000319420 HDGFL2Q7Z4V5 671 aaPredicted RBP20.98■□□□□ 0.95
SHISA2-201ENST00000319420 FYB1O15117 783 aa20.97■□□□□ 0.95
SHISA2-201ENST00000319420 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.97■□□□□ 0.95
SHISA2-201ENST00000319420 SPATA31D1Q6ZQQ2 1576 aa20.97■□□□□ 0.95
SHISA2-201ENST00000319420 REREQ9P2R6 1566 aa20.96■□□□□ 0.95
SHISA2-201ENST00000319420 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
SHISA2-201ENST00000319420 C20orf194Q5TEA3 1177 aa20.95■□□□□ 0.94
SHISA2-201ENST00000319420 DUSP27Q5VZP5 1158 aa20.95■□□□□ 0.94
SHISA2-201ENST00000319420 HDGFP51858 240 aaKnown RBP20.94■□□□□ 0.94
SHISA2-201ENST00000319420 INSRP06213 1382 aa20.94■□□□□ 0.94
SHISA2-201ENST00000319420 ZRANB1Q9UGI0 708 aa20.94■□□□□ 0.94
SHISA2-201ENST00000319420 ATAD2Q6PL18 1390 aa20.94■□□□□ 0.94
SHISA2-201ENST00000319420 TCP11L2Q8N4U5 519 aa20.92■□□□□ 0.94
SHISA2-201ENST00000319420 SOX12O15370 315 aa20.91■□□□□ 0.94
SHISA2-201ENST00000319420 TMEM2Q9UHN6 1383 aa20.91■□□□□ 0.94
SHISA2-201ENST00000319420 WASLO00401 505 aaPredicted RBP20.9■□□□□ 0.94
SHISA2-201ENST00000319420 POLR3AO14802 1390 aaPredicted RBP20.89■□□□□ 0.94
SHISA2-201ENST00000319420 CRBNQ96SW2 442 aa20.89■□□□□ 0.94
SHISA2-201ENST00000319420 NUDT16Q96DE0 195 aaKnown RBP20.89■□□□□ 0.93
SHISA2-201ENST00000319420 EID1Q9Y6B2 187 aa20.89■□□□□ 0.93
SHISA2-201ENST00000319420 SLFN5Q08AF3 891 aa20.88■□□□□ 0.93
SHISA2-201ENST00000319420 NME9Q86XW9 330 aa20.88■□□□□ 0.93
SHISA2-201ENST00000319420 PUS7Q96PZ0 661 aaKnown RBP20.88■□□□□ 0.93
SHISA2-201ENST00000319420 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
SHISA2-201ENST00000319420 ZNF521Q96K83 1311 aa20.87■□□□□ 0.93
SHISA2-201ENST00000319420 RBM33Q96EV2 1170 aaKnown RBP20.87■□□□□ 0.93
SHISA2-201ENST00000319420 BCAR3O75815 825 aa20.87■□□□□ 0.93
SHISA2-201ENST00000319420 ABCC11Q96J66 1382 aa20.87■□□□□ 0.93
SHISA2-201ENST00000319420 RUNDC1Q96C34 613 aa20.86■□□□□ 0.93
SHISA2-201ENST00000319420 SKAP1Q86WV1 359 aa20.86■□□□□ 0.93
SHISA2-201ENST00000319420 ERICH6Q7L0X2 663 aa20.84■□□□□ 0.93
SHISA2-201ENST00000319420 ROBO2Q9HCK4 1378 aa20.84■□□□□ 0.93
SHISA2-201ENST00000319420 BCL2L13Q9BXK5 485 aa20.84■□□□□ 0.93
SHISA2-201ENST00000319420 CD163L1Q9NR16 1453 aa20.83■□□□□ 0.93
SHISA2-201ENST00000319420 RRS1Q15050 365 aaKnown RBP20.82■□□□□ 0.92
SHISA2-201ENST00000319420 PMFBP1Q8TBY8 1022 aa20.82■□□□□ 0.92
SHISA2-201ENST00000319420 EMILIN1Q9Y6C2 1016 aa20.82■□□□□ 0.92
SHISA2-201ENST00000319420 PPIP5K1Q6PFW1 1433 aa20.82■□□□□ 0.92
SHISA2-201ENST00000319420 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
SHISA2-201ENST00000319420 CCDC61Q9Y6R9 512 aa20.81■□□□□ 0.92
SHISA2-201ENST00000319420 MSH5O43196 834 aa20.81■□□□□ 0.92
SHISA2-201ENST00000319420 HMOX1P09601 288 aa20.81■□□□□ 0.92
SHISA2-201ENST00000319420 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
SHISA2-201ENST00000319420 E9PSI1 815 aa20.8■□□□□ 0.92
SHISA2-201ENST00000319420 PRR36Q9H6K5 1346 aa20.8■□□□□ 0.92
SHISA2-201ENST00000319420 NINLQ9Y2I6 1382 aa20.79■□□□□ 0.92
SHISA2-201ENST00000319420 CANXP27824 592 aaKnown RBP20.79■□□□□ 0.92
SHISA2-201ENST00000319420 DIAPH1O60610 1272 aaKnown RBP20.78■□□□□ 0.92
SHISA2-201ENST00000319420 NSD2O96028 1365 aa20.78■□□□□ 0.92
SHISA2-201ENST00000319420 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
SHISA2-201ENST00000319420 NRXN3Q9Y4C0 1643 aa20.77■□□□□ 0.92
SHISA2-201ENST00000319420 MAPK8IP3Q9UPT6 1336 aa20.77■□□□□ 0.92
SHISA2-201ENST00000319420 TSR2Q969E8 191 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms