RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 CDC42BPGQ6DT37 1551 aa42.1■■■■■ 4.33
SYNGR1-202ENST00000318801 PLEKHH1Q9ULM0 1364 aa42.1■■■■■ 4.33
SYNGR1-202ENST00000318801 COL16A1Q07092 1604 aaPredicted RBP42.1■■■■■ 4.33
SYNGR1-202ENST00000318801 TRAK1Q9UPV9 953 aa42.09■■■■■ 4.33
SYNGR1-202ENST00000318801 NEUROD1Q13562 356 aa42.08■■■■■ 4.33
SYNGR1-202ENST00000318801 LRRC59Q96AG4 307 aaKnown RBP42.07■■■■■ 4.33
SYNGR1-202ENST00000318801 ORAI2Q96SN7 254 aa42.06■■■■■ 4.32
SYNGR1-202ENST00000318801 ESCO1Q5FWF5 840 aa42.05■■■■■ 4.32
SYNGR1-202ENST00000318801 SIN3AQ96ST3 1273 aa42.05■■■■■ 4.32
SYNGR1-202ENST00000318801 ADGRB1O14514 1584 aa42.05■■■■■ 4.32
SYNGR1-202ENST00000318801 DLC1Q96QB1 1528 aa42.05■■■■■ 4.32
SYNGR1-202ENST00000318801 SAFB2Q14151 953 aaKnown RBP eCLIP42.04■■■■■ 4.32
SYNGR1-202ENST00000318801 SPATA31A6Q5VVP1 1343 aa42.02■■■■■ 4.32
SYNGR1-202ENST00000318801 NHSL1Q5SYE7 1610 aa42■■■■■ 4.31
SYNGR1-202ENST00000318801 NUTM2FA1L443 756 aa41.99■■■■■ 4.31
SYNGR1-202ENST00000318801 L3MBTL2Q969R5 705 aa41.99■■■■■ 4.31
SYNGR1-202ENST00000318801 DDX17Q92841 729 aaKnown RBP41.97■■■■■ 4.31
SYNGR1-202ENST00000318801 KIAA1210Q9ULL0 1709 aa41.95■■■■■ 4.31
SYNGR1-202ENST00000318801 ILDR2Q71H61 639 aa41.94■■■■■ 4.3
SYNGR1-202ENST00000318801 NPHP3Q7Z494 1330 aa41.93■■■■■ 4.3
SYNGR1-202ENST00000318801 SHPRHQ149N8 1683 aa41.91■■■■■ 4.3
SYNGR1-202ENST00000318801 MEX3CQ5U5Q3 659 aaKnown RBP41.89■■■■■ 4.3
SYNGR1-202ENST00000318801 FMN2Q9NZ56 1722 aa41.89■■■■■ 4.3
SYNGR1-202ENST00000318801 SOS2Q07890 1332 aaPredicted RBP41.87■■■■■ 4.29
SYNGR1-202ENST00000318801 FOXO3O43524 673 aa41.87■■■■■ 4.29
SYNGR1-202ENST00000318801 MINK1Q8N4C8 1332 aaPredicted RBP41.86■■■■■ 4.29
SYNGR1-202ENST00000318801 EIF3AQ14152 1382 aaKnown RBP41.84■■■■■ 4.29
SYNGR1-202ENST00000318801 NUTM2BA6NNL0 878 aaPredicted RBP41.83■■■■■ 4.29
SYNGR1-202ENST00000318801 NUTM2EB1AL46 878 aaPredicted RBP41.83■■■■■ 4.29
SYNGR1-202ENST00000318801 NBPF1Q3BBV0 1214 aa41.83■■■■■ 4.29
SYNGR1-202ENST00000318801 NUTM2AQ8IVF1 878 aaPredicted RBP41.83■■■■■ 4.29
SYNGR1-202ENST00000318801 HIRIP3Q9BW71 556 aaPredicted RBP41.83■■■■■ 4.29
SYNGR1-202ENST00000318801 PHF8Q9UPP1 1060 aa41.78■■■■■ 4.28
SYNGR1-202ENST00000318801 ADGRB2O60241 1585 aa41.77■■■■■ 4.28
SYNGR1-202ENST00000318801 WASLO00401 505 aaPredicted RBP41.76■■■■■ 4.28
SYNGR1-202ENST00000318801 KIF1AQ12756 1690 aa41.76■■■■■ 4.28
SYNGR1-202ENST00000318801 PNPLA6Q8IY17 1366 aa41.76■■■■■ 4.28
SYNGR1-202ENST00000318801 ARHGEF28Q8N1W1 1705 aaKnown RBP41.76■■■■■ 4.28
SYNGR1-202ENST00000318801 ANKARQ7Z5J8 1434 aa41.76■■■■■ 4.28
SYNGR1-202ENST00000318801 TONSLQ96HA7 1378 aa41.75■■■■■ 4.27
SYNGR1-202ENST00000318801 RGPD8O14715 1765 aaPredicted RBP41.72■■■■■ 4.27
SYNGR1-202ENST00000318801 XPCQ01831 940 aaPredicted RBP41.72■■■■■ 4.27
SYNGR1-202ENST00000318801 PSME1Q06323 249 aa41.72■■■■■ 4.27
SYNGR1-202ENST00000318801 RGS17Q9UGC6 210 aaPredicted RBP41.72■■■■■ 4.27
SYNGR1-202ENST00000318801 KRT28Q7Z3Y7 464 aa41.69■■■■■ 4.26
SYNGR1-202ENST00000318801 LRP6O75581 1613 aa41.69■■■■■ 4.26
SYNGR1-202ENST00000318801 PXDNQ92626 1479 aa41.67■■■■■ 4.26
SYNGR1-202ENST00000318801 SOCS7O14512 581 aa41.66■■■■■ 4.26
SYNGR1-202ENST00000318801 ZNF772Q68DY9 489 aaPredicted RBP41.65■■■■■ 4.26
SYNGR1-202ENST00000318801 PCGF6Q9BYE7 350 aa41.65■■■■■ 4.26
SYNGR1-202ENST00000318801 ROCK2O75116 1388 aaKnown RBP41.65■■■■■ 4.26
SYNGR1-202ENST00000318801 CENPJQ9HC77 1338 aaPredicted RBP41.64■■■■■ 4.26
SYNGR1-202ENST00000318801 PMFBP1Q8TBY8 1022 aa41.63■■■■■ 4.25
SYNGR1-202ENST00000318801 TULP4Q9NRJ4 1543 aa41.62■■■■■ 4.25
SYNGR1-202ENST00000318801 CDK19Q9BWU1 502 aa41.62■■■■■ 4.25
SYNGR1-202ENST00000318801 TRPM1Q7Z4N2 1603 aa41.61■■■■■ 4.25
SYNGR1-202ENST00000318801 SPATA31A3Q5VYP0 1347 aa41.57■■■■■ 4.25
SYNGR1-202ENST00000318801 ADAMTS2O95450 1211 aa41.57■■■■■ 4.25
SYNGR1-202ENST00000318801 POTEAQ6S8J7 498 aa41.57■■■■■ 4.25
SYNGR1-202ENST00000318801 NUDT16Q96DE0 195 aaKnown RBP41.57■■■■■ 4.25
SYNGR1-202ENST00000318801 USP32Q8NFA0 1604 aa41.57■■■■■ 4.24
SYNGR1-202ENST00000318801 GPRASP1Q5JY77 1395 aa41.56■■■■■ 4.24
SYNGR1-202ENST00000318801 NGDNQ8NEJ9 315 aaKnown RBP41.56■■■■■ 4.24
SYNGR1-202ENST00000318801 C8orf37Q96NL8 207 aa41.56■■■■■ 4.24
SYNGR1-202ENST00000318801 PRR36Q9H6K5 1346 aa41.54■■■■■ 4.24
SYNGR1-202ENST00000318801 NGLY1Q96IV0 654 aa41.54■■■■■ 4.24
SYNGR1-202ENST00000318801 NBPF8Q3BBV2 869 aa41.53■■■■■ 4.24
SYNGR1-202ENST00000318801 COL22A1Q8NFW1 1626 aaPredicted RBP41.52■■■■■ 4.24
SYNGR1-202ENST00000318801 LMOD2Q6P5Q4 547 aa41.51■■■■■ 4.24
SYNGR1-202ENST00000318801 SBNO1A3KN83 1393 aa41.51■■■■■ 4.24
SYNGR1-202ENST00000318801 SRPK2P78362 688 aaKnown RBP41.5■■■■■ 4.23
SYNGR1-202ENST00000318801 CCDC61Q9Y6R9 512 aa41.5■■■■■ 4.23
SYNGR1-202ENST00000318801 AFF2P51816 1311 aa41.5■■■■■ 4.23
SYNGR1-202ENST00000318801 ITSN1Q15811 1721 aa41.49■■■■■ 4.23
SYNGR1-202ENST00000318801 HAP1P54257 671 aaPredicted RBP41.47■■■■■ 4.23
SYNGR1-202ENST00000318801 CARD11Q9BXL7 1154 aa41.47■■■■■ 4.23
SYNGR1-202ENST00000318801 TNS3Q68CZ2 1445 aa41.47■■■■■ 4.23
SYNGR1-202ENST00000318801 ARHGEF10O15013 1369 aa41.46■■■■■ 4.23
SYNGR1-202ENST00000318801 QRICH2Q9H0J4 1663 aa41.44■■■■■ 4.22
SYNGR1-202ENST00000318801 CLSPNQ9HAW4 1339 aa41.44■■■■■ 4.22
SYNGR1-202ENST00000318801 ATP7BP35670 1465 aa41.43■■■■■ 4.22
SYNGR1-202ENST00000318801 EVC2Q86UK5 1308 aa41.42■■■■■ 4.22
SYNGR1-202ENST00000318801 PAK3O75914 559 aaPredicted RBP41.38■■■■■ 4.22
SYNGR1-202ENST00000318801 RXRBP28702 533 aa41.37■■■■■ 4.21
SYNGR1-202ENST00000318801 CABP2Q9NPB3 220 aa41.37■■■■■ 4.21
SYNGR1-202ENST00000318801 PLEKHG3A1L390 1219 aa41.36■■■■■ 4.21
SYNGR1-202ENST00000318801 RALGAPBQ86X10 1494 aa41.35■■■■■ 4.21
SYNGR1-202ENST00000318801 QTRT2Q9H974 415 aaKnown RBP41.35■■■■■ 4.21
SYNGR1-202ENST00000318801 USP21Q9UK80 565 aa41.35■■■■■ 4.21
SYNGR1-202ENST00000318801 TIMELESSQ9UNS1 1208 aa41.35■■■■■ 4.21
SYNGR1-202ENST00000318801 ACEP12821 1306 aa41.32■■■■■ 4.21
SYNGR1-202ENST00000318801 PLEKHG5O94827 1062 aa41.32■■■■■ 4.21
SYNGR1-202ENST00000318801 FNBP4Q8N3X1 1017 aaPredicted RBP41.32■■■■■ 4.21
SYNGR1-202ENST00000318801 POLR3AO14802 1390 aaPredicted RBP41.29■■■■■ 4.2
SYNGR1-202ENST00000318801 CABLES1Q8TDN4 633 aa41.28■■■■■ 4.2
SYNGR1-202ENST00000318801 MARF1Q9Y4F3 1742 aaKnown RBP41.28■■■■■ 4.2
SYNGR1-202ENST00000318801 PPIP5K1Q6PFW1 1433 aa41.28■■■■■ 4.2
SYNGR1-202ENST00000318801 TRPM3Q9HCF6 1732 aaPredicted RBP41.27■■■■■ 4.2
SYNGR1-202ENST00000318801 CCER1Q8TC90 406 aaPredicted RBP41.26■■■■■ 4.2
SYNGR1-202ENST00000318801 TOPAZ1Q8N9V7 1692 aa41.26■■■■■ 4.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms