RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 NFXL1Q6ZNB6 911 aa16.93■□□□□ 0.3
EDEM3-201ENST00000318130 DIAPH1O60610 1272 aaKnown RBP16.92■□□□□ 0.3
EDEM3-201ENST00000318130 MYCNP04198 464 aaPredicted RBP16.92■□□□□ 0.3
EDEM3-201ENST00000318130 ATP6V1DQ9Y5K8 247 aa16.92■□□□□ 0.3
EDEM3-201ENST00000318130 MYL6BP14649 208 aa16.92■□□□□ 0.3
EDEM3-201ENST00000318130 ZKSCAN2Q63HK3 967 aa16.91■□□□□ 0.3
EDEM3-201ENST00000318130 KIF3AQ9Y496 699 aa16.91■□□□□ 0.3
EDEM3-201ENST00000318130 CHMP4BP1P59074 171 aa16.9■□□□□ 0.3
EDEM3-201ENST00000318130 E9PSI1 815 aa16.9■□□□□ 0.3
EDEM3-201ENST00000318130 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
EDEM3-201ENST00000318130 TPD52L1Q16890 204 aaPredicted RBP16.9■□□□□ 0.3
EDEM3-201ENST00000318130 ZC3H6P61129 1189 aaKnown RBP16.89■□□□□ 0.3
EDEM3-201ENST00000318130 KIF6Q6ZMV9 814 aa16.89■□□□□ 0.3
EDEM3-201ENST00000318130 IFIT2P09913 472 aaKnown RBP16.89■□□□□ 0.29
EDEM3-201ENST00000318130 ANO2Q9NQ90 1003 aa16.89■□□□□ 0.29
EDEM3-201ENST00000318130 GPS2Q13227 327 aa16.88■□□□□ 0.29
EDEM3-201ENST00000318130 CCDC85AQ96PX6 553 aaPredicted RBP16.88■□□□□ 0.29
EDEM3-201ENST00000318130 GPRASP1Q5JY77 1395 aa16.88■□□□□ 0.29
EDEM3-201ENST00000318130 WASHC4Q2M389 1173 aa16.88■□□□□ 0.29
EDEM3-201ENST00000318130 HDAC5Q9UQL6 1122 aa16.88■□□□□ 0.29
EDEM3-201ENST00000318130 FAM184AQ8NB25 1140 aa16.88■□□□□ 0.29
EDEM3-201ENST00000318130 PRAM1Q96QH2 718 aa16.87■□□□□ 0.29
EDEM3-201ENST00000318130 TMEM132AQ24JP5 1023 aa16.87■□□□□ 0.29
EDEM3-201ENST00000318130 PRG4Q92954 1404 aaPredicted RBP16.87■□□□□ 0.29
EDEM3-201ENST00000318130 SYNE3Q6ZMZ3 975 aa16.87■□□□□ 0.29
EDEM3-201ENST00000318130 UACAQ9BZF9 1416 aa16.87■□□□□ 0.29
EDEM3-201ENST00000318130 CHMP4AQ9BY43 222 aa16.87■□□□□ 0.29
EDEM3-201ENST00000318130 CEBPAP49715 358 aaPredicted RBP16.87■□□□□ 0.29
EDEM3-201ENST00000318130 CCDC43Q96MW1 224 aaKnown RBP16.87■□□□□ 0.29
EDEM3-201ENST00000318130 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
EDEM3-201ENST00000318130 RSPH4AQ5TD94 716 aa16.85■□□□□ 0.29
EDEM3-201ENST00000318130 CABP4P57796 275 aa16.85■□□□□ 0.29
EDEM3-201ENST00000318130 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
EDEM3-201ENST00000318130 APAF1O14727 1248 aa16.85■□□□□ 0.29
EDEM3-201ENST00000318130 DIAPH3Q9NSV4 1193 aa16.84■□□□□ 0.29
EDEM3-201ENST00000318130 BCL11BQ9C0K0 894 aaPredicted RBP16.84■□□□□ 0.29
EDEM3-201ENST00000318130 PCMTD1Q96MG8 357 aaPredicted RBP16.84■□□□□ 0.29
EDEM3-201ENST00000318130 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.29
EDEM3-201ENST00000318130 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.29
EDEM3-201ENST00000318130 TEX35Q5T0J7 233 aa16.83■□□□□ 0.29
EDEM3-201ENST00000318130 CEP89Q96ST8 783 aa16.83■□□□□ 0.29
EDEM3-201ENST00000318130 DNAJC2Q99543 621 aaKnown RBP16.83■□□□□ 0.29
EDEM3-201ENST00000318130 IL27Q8NEV9 243 aa16.83■□□□□ 0.28
EDEM3-201ENST00000318130 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
EDEM3-201ENST00000318130 TSR1Q2NL82 804 aaKnown RBP16.82■□□□□ 0.28
EDEM3-201ENST00000318130 RRP12Q5JTH9 1297 aaKnown RBP16.82■□□□□ 0.28
EDEM3-201ENST00000318130 PATL2C9JE40 543 aaKnown RBP16.82■□□□□ 0.28
EDEM3-201ENST00000318130 REC8O95072 547 aa16.82■□□□□ 0.28
EDEM3-201ENST00000318130 HOMER1Q86YM7 354 aa16.82■□□□□ 0.28
EDEM3-201ENST00000318130 MRE11P49959 708 aa16.81■□□□□ 0.28
EDEM3-201ENST00000318130 SIL1Q9H173 461 aa16.8■□□□□ 0.28
EDEM3-201ENST00000318130 MAP4K4O95819 1239 aaPredicted RBP16.8■□□□□ 0.28
EDEM3-201ENST00000318130 TPM1P09493 284 aa16.8■□□□□ 0.28
EDEM3-201ENST00000318130 DDX19BQ9UMR2 479 aa16.8■□□□□ 0.28
EDEM3-201ENST00000318130 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
EDEM3-201ENST00000318130 CNNM1Q9NRU3 951 aa16.79■□□□□ 0.28
EDEM3-201ENST00000318130 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
EDEM3-201ENST00000318130 CCDC70Q6NSX1 233 aa16.79■□□□□ 0.28
EDEM3-201ENST00000318130 IFT57Q9NWB7 429 aa16.79■□□□□ 0.28
EDEM3-201ENST00000318130 ERICH2A1L162 156 aa16.78■□□□□ 0.28
EDEM3-201ENST00000318130 BICD2Q8TD16 824 aa16.78■□□□□ 0.28
EDEM3-201ENST00000318130 USP47Q96K76 1375 aa16.78■□□□□ 0.28
EDEM3-201ENST00000318130 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
EDEM3-201ENST00000318130 NUCB2P80303 420 aa16.78■□□□□ 0.28
EDEM3-201ENST00000318130 RRS1Q15050 365 aaKnown RBP16.78■□□□□ 0.28
EDEM3-201ENST00000318130 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
EDEM3-201ENST00000318130 DZIP1LQ8IYY4 767 aaKnown RBP16.78■□□□□ 0.28
EDEM3-201ENST00000318130 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
EDEM3-201ENST00000318130 PRDM11Q9NQV5 511 aa16.78■□□□□ 0.28
EDEM3-201ENST00000318130 DNAJC5BQ9UF47 199 aa16.77■□□□□ 0.28
EDEM3-201ENST00000318130 USHBP1Q8N6Y0 703 aa16.77■□□□□ 0.28
EDEM3-201ENST00000318130 NGLY1Q96IV0 654 aa16.77■□□□□ 0.28
EDEM3-201ENST00000318130 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
EDEM3-201ENST00000318130 TTLL12Q14166 644 aaPredicted RBP16.77■□□□□ 0.27
EDEM3-201ENST00000318130 ZSCAN29Q8IWY8 852 aaPredicted RBP16.76■□□□□ 0.27
EDEM3-201ENST00000318130 TRIM29Q14134 588 aa16.76■□□□□ 0.27
EDEM3-201ENST00000318130 PKNOX2Q96KN3 472 aa16.76■□□□□ 0.27
EDEM3-201ENST00000318130 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
EDEM3-201ENST00000318130 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
EDEM3-201ENST00000318130 THEMISQ8N1K5 641 aaPredicted RBP16.75■□□□□ 0.27
EDEM3-201ENST00000318130 VPS37CA5D8V6 355 aaPredicted RBP16.75■□□□□ 0.27
EDEM3-201ENST00000318130 PIBF1Q8WXW3 757 aa16.75■□□□□ 0.27
EDEM3-201ENST00000318130 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
EDEM3-201ENST00000318130 RNF214Q8ND24 703 aa16.74■□□□□ 0.27
EDEM3-201ENST00000318130 ZKSCAN1P17029 563 aaPredicted RBP16.74■□□□□ 0.27
EDEM3-201ENST00000318130 TRAK2O60296 914 aa16.74■□□□□ 0.27
EDEM3-201ENST00000318130 LNPKQ9C0E8 428 aa16.73■□□□□ 0.27
EDEM3-201ENST00000318130 MAP7D2Q96T17 732 aa16.73■□□□□ 0.27
EDEM3-201ENST00000318130 SASS6Q6UVJ0 657 aa16.73■□□□□ 0.27
EDEM3-201ENST00000318130 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
EDEM3-201ENST00000318130 MNS1Q8NEH6 495 aa16.72■□□□□ 0.27
EDEM3-201ENST00000318130 TRDNQ13061 729 aa16.72■□□□□ 0.27
EDEM3-201ENST00000318130 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
EDEM3-201ENST00000318130 TPM2P07951 284 aa16.72■□□□□ 0.27
EDEM3-201ENST00000318130 ARGLU1Q9NWB6 273 aaPredicted RBP16.72■□□□□ 0.27
EDEM3-201ENST00000318130 SMG6Q86US8 1419 aaKnown RBP16.72■□□□□ 0.27
EDEM3-201ENST00000318130 CPLX1O14810 134 aa16.72■□□□□ 0.27
EDEM3-201ENST00000318130 TTC39AQ5SRH9 613 aa16.72■□□□□ 0.27
EDEM3-201ENST00000318130 SMC3Q9UQE7 1217 aa16.72■□□□□ 0.27
EDEM3-201ENST00000318130 MTERF4Q7Z6M4 381 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms