RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 PDE4AP27815 886 aa15.88■□□□□ 0.13
SH3PXD2A-201ENST00000315994 HTATSF1O43719 755 aaKnown RBP15.88■□□□□ 0.13
SH3PXD2A-201ENST00000315994 ST18O60284 1047 aa15.88■□□□□ 0.13
SH3PXD2A-201ENST00000315994 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
SH3PXD2A-201ENST00000315994 DNTTIP2Q5QJE6 756 aaKnown RBP15.87■□□□□ 0.13
SH3PXD2A-201ENST00000315994 ATP10BO94823 1461 aa15.87■□□□□ 0.13
SH3PXD2A-201ENST00000315994 ITSN2Q9NZM3 1697 aa15.87■□□□□ 0.13
SH3PXD2A-201ENST00000315994 PRKAR2BP31323 418 aa15.87■□□□□ 0.13
SH3PXD2A-201ENST00000315994 NUP153P49790 1475 aaKnown RBP15.87■□□□□ 0.13
SH3PXD2A-201ENST00000315994 SMG6Q86US8 1419 aaKnown RBP15.87■□□□□ 0.13
SH3PXD2A-201ENST00000315994 KIAA0556O60303 1618 aa15.86■□□□□ 0.13
SH3PXD2A-201ENST00000315994 HSP90B1P14625 803 aaKnown RBP15.86■□□□□ 0.13
SH3PXD2A-201ENST00000315994 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
SH3PXD2A-201ENST00000315994 NRDCO43847 1150 aa15.86■□□□□ 0.13
SH3PXD2A-201ENST00000315994 KIF21AQ7Z4S6 1674 aa15.85■□□□□ 0.13
SH3PXD2A-201ENST00000315994 DHX29Q7Z478 1369 aaKnown RBP15.85■□□□□ 0.13
SH3PXD2A-201ENST00000315994 SLC26A8Q96RN1 970 aa15.84■□□□□ 0.13
SH3PXD2A-201ENST00000315994 PPP6R1Q9UPN7 881 aa15.84■□□□□ 0.13
SH3PXD2A-201ENST00000315994 RPRD2Q5VT52 1461 aaKnown RBP15.84■□□□□ 0.13
SH3PXD2A-201ENST00000315994 PLCH2O75038 1416 aa15.84■□□□□ 0.13
SH3PXD2A-201ENST00000315994 PNISRQ8TF01 805 aaKnown RBP15.84■□□□□ 0.13
SH3PXD2A-201ENST00000315994 PLEKHO1Q53GL0 409 aaPredicted RBP15.83■□□□□ 0.12
SH3PXD2A-201ENST00000315994 FRAT2O75474 233 aaPredicted RBP15.83■□□□□ 0.12
SH3PXD2A-201ENST00000315994 SYTL4Q96C24 671 aaPredicted RBP15.82■□□□□ 0.12
SH3PXD2A-201ENST00000315994 CLSTN1O94985 981 aa15.81■□□□□ 0.12
SH3PXD2A-201ENST00000315994 SYAP1Q96A49 352 aaPredicted RBP15.81■□□□□ 0.12
SH3PXD2A-201ENST00000315994 CDCA7LQ96GN5 454 aa15.81■□□□□ 0.12
SH3PXD2A-201ENST00000315994 NAP1L5Q96NT1 182 aaPredicted RBP15.81■□□□□ 0.12
SH3PXD2A-201ENST00000315994 LRRFIP1Q32MZ4 808 aaKnown RBP15.81■□□□□ 0.12
SH3PXD2A-201ENST00000315994 NSD3Q9BZ95 1437 aa15.81■□□□□ 0.12
SH3PXD2A-201ENST00000315994 MSH5O43196 834 aa15.81■□□□□ 0.12
SH3PXD2A-201ENST00000315994 HSP90AB4PQ58FF6 505 aa15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 PANK1Q8TE04 598 aa15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 EIF4G3O43432 1585 aaKnown RBP15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 WDR62O43379 1518 aa15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 IFIT2P09913 472 aaKnown RBP15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 CSPP1Q1MSJ5 1256 aa15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 RUFY2Q8WXA3 655 aa15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 DIAPH3Q9NSV4 1193 aa15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 ASXL2Q76L83 1435 aa15.8■□□□□ 0.12
SH3PXD2A-201ENST00000315994 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
SH3PXD2A-201ENST00000315994 NOL8Q76FK4 1167 aaKnown RBP15.79■□□□□ 0.12
SH3PXD2A-201ENST00000315994 DUOX2Q9NRD8 1548 aa15.79■□□□□ 0.12
SH3PXD2A-201ENST00000315994 G3BP1Q13283 466 aaKnown RBP eCLIP15.79■□□□□ 0.128e-8■■■□□ 15.7
SH3PXD2A-201ENST00000315994 REC8O95072 547 aa15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 WDR63Q8IWG1 891 aa15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 NUDT16Q96DE0 195 aaKnown RBP15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 CCDC61Q9Y6R9 512 aa15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 EXOSC9Q06265 439 aaKnown RBP15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 KIF3AQ9Y496 699 aa15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 DCAF8L1A6NGE4 600 aa15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 SULT6B1Q6IMI4 303 aa15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 RIC3Q7Z5B4 369 aa15.78■□□□□ 0.12
SH3PXD2A-201ENST00000315994 PHF23Q9BUL5 403 aaPredicted RBP15.77■□□□□ 0.12
SH3PXD2A-201ENST00000315994 KDM5BQ9UGL1 1544 aa15.77■□□□□ 0.12
SH3PXD2A-201ENST00000315994 CFAP43Q8NDM7 1665 aa15.77■□□□□ 0.12
SH3PXD2A-201ENST00000315994 WDR7Q9Y4E6 1490 aa15.77■□□□□ 0.12
SH3PXD2A-201ENST00000315994 ADGRF5Q8IZF2 1346 aa15.77■□□□□ 0.11
SH3PXD2A-201ENST00000315994 CT47B1P0C2W7 299 aaPredicted RBP15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 TWISTNBQ3B726 338 aaPredicted RBP15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 CHMP4CQ96CF2 233 aa15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 FOXD4L1Q9NU39 408 aa15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 SCAF11Q99590 1463 aaKnown RBP15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 IDI1Q13907 227 aa15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 TOMM22Q9NS69 142 aa15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 TCOF1Q13428 1488 aaKnown RBP15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 SYCP2Q9BX26 1530 aa15.76■□□□□ 0.11
SH3PXD2A-201ENST00000315994 UBTFL1P0CB47 393 aaPredicted RBP15.75■□□□□ 0.11
SH3PXD2A-201ENST00000315994 TATP17735 454 aaPredicted RBP15.75■□□□□ 0.11
SH3PXD2A-201ENST00000315994 PTPRKQ15262 1439 aa15.75■□□□□ 0.11
SH3PXD2A-201ENST00000315994 NOS1P29475 1434 aa15.75■□□□□ 0.11
SH3PXD2A-201ENST00000315994 FBXO31Q5XUX0 539 aaPredicted RBP15.75■□□□□ 0.11
SH3PXD2A-201ENST00000315994 PDE3AQ14432 1141 aa15.74■□□□□ 0.11
SH3PXD2A-201ENST00000315994 DRC7Q8IY82 874 aa15.74■□□□□ 0.11
SH3PXD2A-201ENST00000315994 TEX14Q8IWB6 1497 aa15.74■□□□□ 0.11
SH3PXD2A-201ENST00000315994 NINLQ9Y2I6 1382 aa15.74■□□□□ 0.11
SH3PXD2A-201ENST00000315994 AIMP1Q12904 312 aaKnown RBP15.74■□□□□ 0.11
SH3PXD2A-201ENST00000315994 FCHSD2O94868 740 aa15.73■□□□□ 0.11
SH3PXD2A-201ENST00000315994 GNAI3P08754 354 aa15.73■□□□□ 0.11
SH3PXD2A-201ENST00000315994 GZF1Q9H116 711 aaPredicted RBP15.73■□□□□ 0.11
SH3PXD2A-201ENST00000315994 WAPLQ7Z5K2 1190 aa15.73■□□□□ 0.11
SH3PXD2A-201ENST00000315994 PBRM1Q86U86 1689 aa15.73■□□□□ 0.11
SH3PXD2A-201ENST00000315994 MSNP26038 577 aaKnown RBP15.73■□□□□ 0.11
SH3PXD2A-201ENST00000315994 ZNF518AQ6AHZ1 1483 aa15.72■□□□□ 0.11
SH3PXD2A-201ENST00000315994 ERC2O15083 957 aa15.72■□□□□ 0.11
SH3PXD2A-201ENST00000315994 CCDC34Q96HJ3 373 aa15.72■□□□□ 0.11
SH3PXD2A-201ENST00000315994 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
SH3PXD2A-201ENST00000315994 INTS3Q68E01 1043 aaKnown RBP15.72■□□□□ 0.11
SH3PXD2A-201ENST00000315994 TSR2Q969E8 191 aaKnown RBP15.72■□□□□ 0.11
SH3PXD2A-201ENST00000315994 ZKSCAN1P17029 563 aaPredicted RBP15.71■□□□□ 0.11
SH3PXD2A-201ENST00000315994 RRS1Q15050 365 aaKnown RBP15.71■□□□□ 0.11
SH3PXD2A-201ENST00000315994 C14orf93Q9H972 538 aaKnown RBP15.71■□□□□ 0.11
SH3PXD2A-201ENST00000315994 NUP160Q12769 1436 aa15.71■□□□□ 0.11
SH3PXD2A-201ENST00000315994 FANCIQ9NVI1 1328 aa15.71■□□□□ 0.1
SH3PXD2A-201ENST00000315994 C11orf95C9JLR9 678 aaPredicted RBP15.71■□□□□ 0.1
SH3PXD2A-201ENST00000315994 CCDC184Q52MB2 194 aa15.71■□□□□ 0.1
SH3PXD2A-201ENST00000315994 A2MP01023 1474 aa15.7■□□□□ 0.1
SH3PXD2A-201ENST00000315994 DDX11L8A8MPP1 907 aa15.7■□□□□ 0.1
SH3PXD2A-201ENST00000315994 NOB1Q9ULX3 412 aaKnown RBP15.69■□□□□ 0.1
SH3PXD2A-201ENST00000315994 SPG7Q9UQ90 795 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms