RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TSPYL4Q9UJ04 414 aa17.2■□□□□ 0.34
DDX54-202ENST00000314045 DZIP1LQ8IYY4 767 aaKnown RBP17.2■□□□□ 0.34
DDX54-202ENST00000314045 UHRF1BP1LA0JNW5 1464 aa17.2■□□□□ 0.34
DDX54-202ENST00000314045 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
DDX54-202ENST00000314045 RALGAPBQ86X10 1494 aa17.19■□□□□ 0.34
DDX54-202ENST00000314045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
DDX54-202ENST00000314045 RBM33Q96EV2 1170 aaKnown RBP17.19■□□□□ 0.34
DDX54-202ENST00000314045 ANP32EQ9BTT0 268 aa17.18■□□□□ 0.34
DDX54-202ENST00000314045 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
DDX54-202ENST00000314045 TTC5Q8N0Z6 440 aa17.18■□□□□ 0.34
DDX54-202ENST00000314045 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
DDX54-202ENST00000314045 MBD5Q9P267 1494 aa17.18■□□□□ 0.34
DDX54-202ENST00000314045 ATP7AQ04656 1500 aa17.17■□□□□ 0.34
DDX54-202ENST00000314045 ANP32BQ92688 251 aaKnown RBP17.17■□□□□ 0.34
DDX54-202ENST00000314045 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
DDX54-202ENST00000314045 CHD1O14646 1710 aa17.17■□□□□ 0.34
DDX54-202ENST00000314045 GAS2L2Q8NHY3 880 aa17.16■□□□□ 0.34
DDX54-202ENST00000314045 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
DDX54-202ENST00000314045 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
DDX54-202ENST00000314045 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
DDX54-202ENST00000314045 NME9Q86XW9 330 aa17.15■□□□□ 0.34
DDX54-202ENST00000314045 KIF16BQ96L93 1317 aa17.15■□□□□ 0.34
DDX54-202ENST00000314045 AEBP2Q6ZN18 517 aaPredicted RBP17.15■□□□□ 0.34
DDX54-202ENST00000314045 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.34
DDX54-202ENST00000314045 TSHZ2Q9NRE2 1034 aa17.14■□□□□ 0.34
DDX54-202ENST00000314045 NOP58Q9Y2X3 529 aaKnown RBP17.14■□□□□ 0.33
DDX54-202ENST00000314045 TESK2Q96S53 571 aa17.14■□□□□ 0.33
DDX54-202ENST00000314045 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
DDX54-202ENST00000314045 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
DDX54-202ENST00000314045 HSP90AB1P08238 724 aaKnown RBP17.13■□□□□ 0.33
DDX54-202ENST00000314045 ZMYM3Q14202 1370 aa17.13■□□□□ 0.33
DDX54-202ENST00000314045 TSR2Q969E8 191 aaKnown RBP17.12■□□□□ 0.33
DDX54-202ENST00000314045 FCHSD2O94868 740 aa17.12■□□□□ 0.33
DDX54-202ENST00000314045 GOLGA6L22H0YM25 854 aa17.12■□□□□ 0.33
DDX54-202ENST00000314045 NEO1Q92859 1461 aa17.12■□□□□ 0.33
DDX54-202ENST00000314045 FGD1P98174 961 aa17.12■□□□□ 0.33
DDX54-202ENST00000314045 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
DDX54-202ENST00000314045 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
DDX54-202ENST00000314045 PHF8Q9UPP1 1060 aa17.11■□□□□ 0.33
DDX54-202ENST00000314045 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
DDX54-202ENST00000314045 FOXO3O43524 673 aa17.11■□□□□ 0.33
DDX54-202ENST00000314045 ATP10AO60312 1499 aa17.1■□□□□ 0.33
DDX54-202ENST00000314045 ANKRD45Q5TZF3 282 aa17.1■□□□□ 0.33
DDX54-202ENST00000314045 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
DDX54-202ENST00000314045 USP35Q9P2H5 1018 aa17.1■□□□□ 0.33
DDX54-202ENST00000314045 MCCP23508 829 aa17.1■□□□□ 0.33
DDX54-202ENST00000314045 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
DDX54-202ENST00000314045 TAF7LQ5H9L4 462 aa17.1■□□□□ 0.33
DDX54-202ENST00000314045 HSCBQ8IWL3 235 aa17.1■□□□□ 0.33
DDX54-202ENST00000314045 NEXNQ0ZGT2 675 aa17.09■□□□□ 0.33
DDX54-202ENST00000314045 ARHGEF12Q9NZN5 1544 aa17.09■□□□□ 0.33
DDX54-202ENST00000314045 KIAA1211Q6ZU35 1233 aa17.09■□□□□ 0.33
DDX54-202ENST00000314045 ARHGEF5Q12774 1597 aa17.08■□□□□ 0.32
DDX54-202ENST00000314045 ZC3H6P61129 1189 aaKnown RBP17.08■□□□□ 0.32
DDX54-202ENST00000314045 EMILIN1Q9Y6C2 1016 aa17.08■□□□□ 0.32
DDX54-202ENST00000314045 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
DDX54-202ENST00000314045 C9orf78Q9NZ63 289 aaPredicted RBP17.07■□□□□ 0.32
DDX54-202ENST00000314045 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
DDX54-202ENST00000314045 MFAP1P55081 439 aaKnown RBP17.07■□□□□ 0.32
DDX54-202ENST00000314045 NCLP19338 710 aaKnown RBP17.07■□□□□ 0.32
DDX54-202ENST00000314045 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
DDX54-202ENST00000314045 BCAR3O75815 825 aa17.07■□□□□ 0.32
DDX54-202ENST00000314045 TWISTNBQ3B726 338 aaPredicted RBP17.07■□□□□ 0.32
DDX54-202ENST00000314045 GORABQ5T7V8 394 aa17.06■□□□□ 0.32
DDX54-202ENST00000314045 AMER1Q5JTC6 1135 aaPredicted RBP17.06■□□□□ 0.32
DDX54-202ENST00000314045 PRDM11Q9NQV5 511 aa17.06■□□□□ 0.32
DDX54-202ENST00000314045 STRN4Q9NRL3 753 aa17.06■□□□□ 0.32
DDX54-202ENST00000314045 DDX58O95786 925 aaKnown RBP17.06■□□□□ 0.32
DDX54-202ENST00000314045 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
DDX54-202ENST00000314045 ZNF530Q6P9A1 599 aaPredicted RBP17.05■□□□□ 0.32
DDX54-202ENST00000314045 KCNH5Q8NCM2 988 aa17.05■□□□□ 0.32
DDX54-202ENST00000314045 TATP17735 454 aaPredicted RBP17.04■□□□□ 0.32
DDX54-202ENST00000314045 GPATCH3Q96I76 525 aa17.04■□□□□ 0.32
DDX54-202ENST00000314045 ACEP12821 1306 aa17.04■□□□□ 0.32
DDX54-202ENST00000314045 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
DDX54-202ENST00000314045 GTF2E1P29083 439 aaPredicted RBP17.04■□□□□ 0.32
DDX54-202ENST00000314045 NFE2L2Q16236 605 aa17.04■□□□□ 0.32
DDX54-202ENST00000314045 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
DDX54-202ENST00000314045 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
DDX54-202ENST00000314045 PDE4AP27815 886 aa17.03■□□□□ 0.32
DDX54-202ENST00000314045 MAST1Q9Y2H9 1570 aa17.03■□□□□ 0.32
DDX54-202ENST00000314045 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
DDX54-202ENST00000314045 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
DDX54-202ENST00000314045 SAMD9LQ8IVG5 1584 aa17.03■□□□□ 0.32
DDX54-202ENST00000314045 NAP1L2Q9ULW6 460 aaPredicted RBP17.03■□□□□ 0.32
DDX54-202ENST00000314045 UHRF1BP1Q6BDS2 1440 aa17.02■□□□□ 0.32
DDX54-202ENST00000314045 TTC37Q6PGP7 1564 aa17.02■□□□□ 0.32
DDX54-202ENST00000314045 PDE3AQ14432 1141 aa17.02■□□□□ 0.32
DDX54-202ENST00000314045 FYB1O15117 783 aa17.02■□□□□ 0.31
DDX54-202ENST00000314045 NSD2O96028 1365 aa17.01■□□□□ 0.31
DDX54-202ENST00000314045 AAMPQ13685 434 aa17.01■□□□□ 0.31
DDX54-202ENST00000314045 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
DDX54-202ENST00000314045 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
DDX54-202ENST00000314045 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
DDX54-202ENST00000314045 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
DDX54-202ENST00000314045 FAM161AQ3B820 660 aa17■□□□□ 0.31
DDX54-202ENST00000314045 FBLN1P23142 703 aa17■□□□□ 0.31
DDX54-202ENST00000314045 PUS7Q96PZ0 661 aaKnown RBP17■□□□□ 0.31
DDX54-202ENST00000314045 CT47B1P0C2W7 299 aaPredicted RBP16.99■□□□□ 0.31
DDX54-202ENST00000314045 ANKRD36BQ8N2N9 1353 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms