RNA–Protein interactions for RNA: ENST00000311066.9

PRDM2-202, Transcript of PR/SET domain 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM2, Length 7,437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-202ENST00000311066 NBPF8Q3BBV2 869 aa8.16□□□□□ -1.1
PRDM2-202ENST00000311066 NUDT16Q96DE0 195 aaKnown RBP8.16□□□□□ -1.1
PRDM2-202ENST00000311066 DCAF8L1A6NGE4 600 aa8.16□□□□□ -1.1
PRDM2-202ENST00000311066 AIMP1Q12904 312 aaKnown RBP8.16□□□□□ -1.1
PRDM2-202ENST00000311066 DDX19BQ9UMR2 479 aa8.16□□□□□ -1.1
PRDM2-202ENST00000311066 SPG7Q9UQ90 795 aa8.16□□□□□ -1.1
PRDM2-202ENST00000311066 CCDC61Q9Y6R9 512 aa8.16□□□□□ -1.1
PRDM2-202ENST00000311066 MFAP1P55081 439 aaKnown RBP8.16□□□□□ -1.1
PRDM2-202ENST00000311066 VPS37DQ86XT2 251 aa8.16□□□□□ -1.1
PRDM2-202ENST00000311066 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
PRDM2-202ENST00000311066 ZBED9Q6R2W3 1325 aa8.16□□□□□ -1.1
PRDM2-202ENST00000311066 IDI1Q13907 227 aa8.15□□□□□ -1.1
PRDM2-202ENST00000311066 PPP2R1AP30153 589 aa8.15□□□□□ -1.1
PRDM2-202ENST00000311066 AMOTL2Q9Y2J4 779 aa8.15□□□□□ -1.1
PRDM2-202ENST00000311066 NAIPQ13075 1403 aa8.15□□□□□ -1.1
PRDM2-202ENST00000311066 G3BP1Q13283 466 aaKnown RBP eCLIP8.15□□□□□ -1.1
PRDM2-202ENST00000311066 DZIP1LQ8IYY4 767 aaKnown RBP8.15□□□□□ -1.1
PRDM2-202ENST00000311066 NOC3LQ8WTT2 800 aaKnown RBP8.15□□□□□ -1.1
PRDM2-202ENST00000311066 KIF16BQ96L93 1317 aa8.15□□□□□ -1.1
PRDM2-202ENST00000311066 GOLGA6L6A8MZA4 724 aa8.15□□□□□ -1.1
PRDM2-202ENST00000311066 ZNF530Q6P9A1 599 aaPredicted RBP8.15□□□□□ -1.1
PRDM2-202ENST00000311066 DDX54Q8TDD1 881 aaKnown RBP8.15□□□□□ -1.1
PRDM2-202ENST00000311066 COG6Q9Y2V7 657 aa8.15□□□□□ -1.1
PRDM2-202ENST00000311066 AMOTL1Q8IY63 956 aa8.15□□□□□ -1.11
PRDM2-202ENST00000311066 KCNH5Q8NCM2 988 aa8.15□□□□□ -1.11
PRDM2-202ENST00000311066 TNNT3P45378 269 aaPredicted RBP8.14□□□□□ -1.11
PRDM2-202ENST00000311066 FBXW7Q969H0 707 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 HTATSF1O43719 755 aaKnown RBP8.14□□□□□ -1.11
PRDM2-202ENST00000311066 IFIT2P09913 472 aaKnown RBP8.14□□□□□ -1.11
PRDM2-202ENST00000311066 ANKRD45Q5TZF3 282 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 TCP11L2Q8N4U5 519 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 SPRYD3Q8NCJ5 442 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 TRIM34Q9BYJ4 488 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 TNRQ92752 1358 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 CALRP27797 417 aaKnown RBP8.14□□□□□ -1.11
PRDM2-202ENST00000311066 SULT6B1Q6IMI4 303 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 CABP4P57796 275 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 ZC3H6P61129 1189 aaKnown RBP8.14□□□□□ -1.11
PRDM2-202ENST00000311066 HSP90AB4PQ58FF6 505 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 WAPLQ7Z5K2 1190 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 PHF8Q9UPP1 1060 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 PLCH2O75038 1416 aa8.14□□□□□ -1.11
PRDM2-202ENST00000311066 RILPL2Q969X0 211 aa8.13□□□□□ -1.11
PRDM2-202ENST00000311066 BRD4O60885 1362 aaPredicted RBP8.13□□□□□ -1.11
PRDM2-202ENST00000311066 PNISRQ8TF01 805 aaKnown RBP8.13□□□□□ -1.11
PRDM2-202ENST00000311066 PLIN1O60240 522 aa8.13□□□□□ -1.11
PRDM2-202ENST00000311066 RRP1P56182 461 aaKnown RBP8.13□□□□□ -1.11
PRDM2-202ENST00000311066 CCDC30Q5VVM6 783 aa8.13□□□□□ -1.11
PRDM2-202ENST00000311066 KIF6Q6ZMV9 814 aa8.13□□□□□ -1.11
PRDM2-202ENST00000311066 DIAPH3Q9NSV4 1193 aa8.13□□□□□ -1.11
PRDM2-202ENST00000311066 NRDCO43847 1150 aa8.13□□□□□ -1.11
PRDM2-202ENST00000311066 ADAMTS8Q9UP79 889 aa8.13□□□□□ -1.11
PRDM2-202ENST00000311066 NOP58Q9Y2X3 529 aaKnown RBP8.12□□□□□ -1.11
PRDM2-202ENST00000311066 WDR7Q9Y4E6 1490 aa8.12□□□□□ -1.11
PRDM2-202ENST00000311066 NCOA1Q15788 1441 aa8.12□□□□□ -1.11
PRDM2-202ENST00000311066 HMGB2P26583 209 aaKnown RBP8.12□□□□□ -1.11
PRDM2-202ENST00000311066 BIVM-ERCC5R4GMW8 1640 aa8.11□□□□□ -1.11
PRDM2-202ENST00000311066 MAP3K1Q13233 1512 aa8.11□□□□□ -1.11
PRDM2-202ENST00000311066 DRC7Q8IY82 874 aa8.11□□□□□ -1.11
PRDM2-202ENST00000311066 KIF3AQ9Y496 699 aa8.11□□□□□ -1.11
PRDM2-202ENST00000311066 ATP10BO94823 1461 aa8.11□□□□□ -1.11
PRDM2-202ENST00000311066 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
PRDM2-202ENST00000311066 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
PRDM2-202ENST00000311066 UBTFL1P0CB47 393 aaPredicted RBP8.11□□□□□ -1.11
PRDM2-202ENST00000311066 RUFY2Q8WXA3 655 aa8.11□□□□□ -1.11
PRDM2-202ENST00000311066 RRS1Q15050 365 aaKnown RBP8.1□□□□□ -1.11
PRDM2-202ENST00000311066 CHMP4CQ96CF2 233 aa8.1□□□□□ -1.11
PRDM2-202ENST00000311066 CCDC34Q96HJ3 373 aa8.1□□□□□ -1.11
PRDM2-202ENST00000311066 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
PRDM2-202ENST00000311066 LRPPRCP42704 1394 aaKnown RBP8.1□□□□□ -1.11
PRDM2-202ENST00000311066 FOXO3O43524 673 aa8.1□□□□□ -1.11
PRDM2-202ENST00000311066 NOL8Q76FK4 1167 aaKnown RBP8.1□□□□□ -1.11
PRDM2-202ENST00000311066 CRBNQ96SW2 442 aa8.1□□□□□ -1.11
PRDM2-202ENST00000311066 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
PRDM2-202ENST00000311066 WASLO00401 505 aaPredicted RBP8.09□□□□□ -1.11
PRDM2-202ENST00000311066 RASSF8Q8NHQ8 419 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 CTDP1Q9Y5B0 961 aaPredicted RBP8.09□□□□□ -1.11
PRDM2-202ENST00000311066 A0A0U1RQG5 324 aaPredicted RBP8.09□□□□□ -1.11
PRDM2-202ENST00000311066 EXOC6Q8TAG9 804 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 GPATCH8Q9UKJ3 1502 aaKnown RBP8.09□□□□□ -1.11
PRDM2-202ENST00000311066 ST18O60284 1047 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 MARCH6O60337 910 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 SYNE3Q6ZMZ3 975 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 NEUROD6Q96NK8 337 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 ADAMTS2O95450 1211 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 APPP05067 770 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 GNAI3P08754 354 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 TWISTNBQ3B726 338 aaPredicted RBP8.09□□□□□ -1.11
PRDM2-202ENST00000311066 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 GBP4Q96PP9 640 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 VPS53Q5VIR6 699 aa8.09□□□□□ -1.11
PRDM2-202ENST00000311066 PPP1R1BQ9UD71 204 aaPredicted RBP8.08□□□□□ -1.12
PRDM2-202ENST00000311066 RAD21O60216 631 aa8.08□□□□□ -1.12
PRDM2-202ENST00000311066 ZNF518AQ6AHZ1 1483 aa8.08□□□□□ -1.12
PRDM2-202ENST00000311066 PTPN23Q9H3S7 1636 aa8.08□□□□□ -1.12
PRDM2-202ENST00000311066 AKAP17AQ02040 695 aaKnown RBP8.08□□□□□ -1.12
PRDM2-202ENST00000311066 NGLY1Q96IV0 654 aa8.08□□□□□ -1.12
PRDM2-202ENST00000311066 NOS1P29475 1434 aa8.08□□□□□ -1.12
PRDM2-202ENST00000311066 ERC2O15083 957 aa8.08□□□□□ -1.12
PRDM2-202ENST00000311066 KDM5BQ9UGL1 1544 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms