RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PRAM1Q96QH2 718 aa28.36■■■□□ 2.13
VEGFB-201ENST00000309422 ROBO1Q9Y6N7 1651 aa28.35■■■□□ 2.13
VEGFB-201ENST00000309422 CDC42BPGQ6DT37 1551 aa28.34■■■□□ 2.13
VEGFB-201ENST00000309422 SAFB2Q14151 953 aaKnown RBP eCLIP28.32■■■□□ 2.12
VEGFB-201ENST00000309422 MST1RQ04912 1400 aa28.32■■■□□ 2.12
VEGFB-201ENST00000309422 PLEKHH1Q9ULM0 1364 aa28.31■■■□□ 2.12
VEGFB-201ENST00000309422 ROCK2O75116 1388 aaKnown RBP28.31■■■□□ 2.12
VEGFB-201ENST00000309422 EIF3AQ14152 1382 aaKnown RBP28.26■■■□□ 2.11
VEGFB-201ENST00000309422 C1orf167Q5SNV9 1468 aa28.25■■■□□ 2.11
VEGFB-201ENST00000309422 BRINP3Q76B58 766 aa28.24■■■□□ 2.11
VEGFB-201ENST00000309422 NBPF1Q3BBV0 1214 aa28.23■■■□□ 2.11
VEGFB-201ENST00000309422 TIMELESSQ9UNS1 1208 aa28.21■■■□□ 2.11
VEGFB-201ENST00000309422 TRPM1Q7Z4N2 1603 aa28.21■■■□□ 2.11
VEGFB-201ENST00000309422 MINK1Q8N4C8 1332 aaPredicted RBP28.21■■■□□ 2.11
VEGFB-201ENST00000309422 ESCO1Q5FWF5 840 aa28.19■■■□□ 2.1
VEGFB-201ENST00000309422 PHLPP1O60346 1717 aa28.18■■■□□ 2.1
VEGFB-201ENST00000309422 ARHGEF28Q8N1W1 1705 aaKnown RBP28.18■■■□□ 2.1
VEGFB-201ENST00000309422 NUTM2FA1L443 756 aa28.18■■■□□ 2.1
VEGFB-201ENST00000309422 ADGRB2O60241 1585 aa28.18■■■□□ 2.1
VEGFB-201ENST00000309422 AHDC1Q5TGY3 1603 aaPredicted RBP28.18■■■□□ 2.1
VEGFB-201ENST00000309422 HIRIP3Q9BW71 556 aaPredicted RBP28.17■■■□□ 2.1
VEGFB-201ENST00000309422 CENPJQ9HC77 1338 aaPredicted RBP28.17■■■□□ 2.1
VEGFB-201ENST00000309422 RALGAPBQ86X10 1494 aa28.16■■■□□ 2.1
VEGFB-201ENST00000309422 CARD11Q9BXL7 1154 aa28.15■■■□□ 2.1
VEGFB-201ENST00000309422 FMN2Q9NZ56 1722 aa28.13■■■□□ 2.09
VEGFB-201ENST00000309422 ANKARQ7Z5J8 1434 aa28.13■■■□□ 2.09
VEGFB-201ENST00000309422 NPHP3Q7Z494 1330 aa28.13■■■□□ 2.09
VEGFB-201ENST00000309422 JCADQ9P266 1359 aa28.13■■■□□ 2.09
VEGFB-201ENST00000309422 NBPF8Q3BBV2 869 aa28.12■■■□□ 2.09
VEGFB-201ENST00000309422 ORAI2Q96SN7 254 aa28.11■■■□□ 2.09
VEGFB-201ENST00000309422 WASLO00401 505 aaPredicted RBP28.11■■■□□ 2.09
VEGFB-201ENST00000309422 GPRASP1Q5JY77 1395 aa28.1■■■□□ 2.09
VEGFB-201ENST00000309422 COL16A1Q07092 1604 aaPredicted RBP28.08■■■□□ 2.09
VEGFB-201ENST00000309422 NHSL1Q5SYE7 1610 aa28.08■■■□□ 2.09
VEGFB-201ENST00000309422 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
VEGFB-201ENST00000309422 KIF1AQ12756 1690 aa28.08■■■□□ 2.09
VEGFB-201ENST00000309422 LRRC59Q96AG4 307 aaKnown RBP28.08■■■□□ 2.09
VEGFB-201ENST00000309422 PHF8Q9UPP1 1060 aa28.05■■■□□ 2.08
VEGFB-201ENST00000309422 SRPK2P78362 688 aaKnown RBP28.03■■■□□ 2.08
VEGFB-201ENST00000309422 PHF23Q9BUL5 403 aaPredicted RBP28.03■■■□□ 2.08
VEGFB-201ENST00000309422 QRICH2Q9H0J4 1663 aa28.02■■■□□ 2.08
VEGFB-201ENST00000309422 DISP3Q9P2K9 1392 aa28.01■■■□□ 2.08
VEGFB-201ENST00000309422 FOXO3O43524 673 aa28.01■■■□□ 2.07
VEGFB-201ENST00000309422 DDX17Q92841 729 aaKnown RBP28.01■■■□□ 2.07
VEGFB-201ENST00000309422 CDK19Q9BWU1 502 aa28.01■■■□□ 2.07
VEGFB-201ENST00000309422 SPATA31A6Q5VVP1 1343 aa28.01■■■□□ 2.07
VEGFB-201ENST00000309422 EVC2Q86UK5 1308 aa28.01■■■□□ 2.07
VEGFB-201ENST00000309422 PSME1Q06323 249 aa27.99■■■□□ 2.07
VEGFB-201ENST00000309422 MED1Q15648 1581 aaPredicted RBP27.99■■■□□ 2.07
VEGFB-201ENST00000309422 SOS2Q07890 1332 aaPredicted RBP27.98■■■□□ 2.07
VEGFB-201ENST00000309422 MEX3CQ5U5Q3 659 aaKnown RBP27.97■■■□□ 2.07
VEGFB-201ENST00000309422 NGDNQ8NEJ9 315 aaKnown RBP27.97■■■□□ 2.07
VEGFB-201ENST00000309422 NUDT16Q96DE0 195 aaKnown RBP27.97■■■□□ 2.07
VEGFB-201ENST00000309422 PMFBP1Q8TBY8 1022 aa27.96■■■□□ 2.07
VEGFB-201ENST00000309422 ATP7BP35670 1465 aa27.95■■■□□ 2.06
VEGFB-201ENST00000309422 ITSN1Q15811 1721 aa27.95■■■□□ 2.06
VEGFB-201ENST00000309422 SLC24A1O60721 1099 aa27.95■■■□□ 2.06
VEGFB-201ENST00000309422 SHPRHQ149N8 1683 aa27.94■■■□□ 2.06
VEGFB-201ENST00000309422 XPCQ01831 940 aaPredicted RBP27.94■■■□□ 2.06
VEGFB-201ENST00000309422 CCDC61Q9Y6R9 512 aa27.93■■■□□ 2.06
VEGFB-201ENST00000309422 SBNO2Q9Y2G9 1366 aa27.93■■■□□ 2.06
VEGFB-201ENST00000309422 USP32Q8NFA0 1604 aa27.92■■■□□ 2.06
VEGFB-201ENST00000309422 KRT28Q7Z3Y7 464 aa27.92■■■□□ 2.06
VEGFB-201ENST00000309422 PRR36Q9H6K5 1346 aa27.92■■■□□ 2.06
VEGFB-201ENST00000309422 PXDNQ92626 1479 aa27.92■■■□□ 2.06
VEGFB-201ENST00000309422 PNPLA6Q8IY17 1366 aa27.91■■■□□ 2.06
VEGFB-201ENST00000309422 NUTM2BA6NNL0 878 aaPredicted RBP27.89■■■□□ 2.06
VEGFB-201ENST00000309422 NUTM2EB1AL46 878 aaPredicted RBP27.89■■■□□ 2.06
VEGFB-201ENST00000309422 NUTM2AQ8IVF1 878 aaPredicted RBP27.89■■■□□ 2.06
VEGFB-201ENST00000309422 CABP2Q9NPB3 220 aa27.89■■■□□ 2.06
VEGFB-201ENST00000309422 USP47Q96K76 1375 aa27.88■■■□□ 2.05
VEGFB-201ENST00000309422 ATAD2Q6PL18 1390 aa27.88■■■□□ 2.05
VEGFB-201ENST00000309422 LMOD2Q6P5Q4 547 aa27.87■■■□□ 2.05
VEGFB-201ENST00000309422 TNS3Q68CZ2 1445 aa27.87■■■□□ 2.05
VEGFB-201ENST00000309422 PPIP5K1Q6PFW1 1433 aa27.87■■■□□ 2.05
VEGFB-201ENST00000309422 SBNO1A3KN83 1393 aa27.86■■■□□ 2.05
VEGFB-201ENST00000309422 ARHGEF10O15013 1369 aa27.86■■■□□ 2.05
VEGFB-201ENST00000309422 HAP1P54257 671 aaPredicted RBP27.86■■■□□ 2.05
VEGFB-201ENST00000309422 RGPD8O14715 1765 aaPredicted RBP27.86■■■□□ 2.05
VEGFB-201ENST00000309422 SPATA31A3Q5VYP0 1347 aa27.83■■■□□ 2.05
VEGFB-201ENST00000309422 ST20-MTHFSA0A0A6YYL1 179 aa27.82■■■□□ 2.04
VEGFB-201ENST00000309422 PAK3O75914 559 aaPredicted RBP27.82■■■□□ 2.04
VEGFB-201ENST00000309422 TOPAZ1Q8N9V7 1692 aa27.82■■■□□ 2.04
VEGFB-201ENST00000309422 PLEKHG3A1L390 1219 aa27.8■■■□□ 2.04
VEGFB-201ENST00000309422 ACEP12821 1306 aa27.79■■■□□ 2.04
VEGFB-201ENST00000309422 POLR3AO14802 1390 aaPredicted RBP27.78■■■□□ 2.04
VEGFB-201ENST00000309422 TMF1P82094 1093 aa27.78■■■□□ 2.04
VEGFB-201ENST00000309422 LRP6O75581 1613 aa27.77■■■□□ 2.04
VEGFB-201ENST00000309422 COL22A1Q8NFW1 1626 aaPredicted RBP27.76■■■□□ 2.04
VEGFB-201ENST00000309422 CDCA8Q53HL2 280 aa27.76■■■□□ 2.03
VEGFB-201ENST00000309422 CABP1Q9NZU7 370 aa27.76■■■□□ 2.03
VEGFB-201ENST00000309422 ADAMTS2O95450 1211 aa27.75■■■□□ 2.03
VEGFB-201ENST00000309422 BRD4O60885 1362 aaPredicted RBP27.74■■■□□ 2.03
VEGFB-201ENST00000309422 TMC1Q8TDI8 760 aa27.73■■■□□ 2.03
VEGFB-201ENST00000309422 C8orf37Q96NL8 207 aa27.73■■■□□ 2.03
VEGFB-201ENST00000309422 PLEKHG5O94827 1062 aa27.72■■■□□ 2.03
VEGFB-201ENST00000309422 EIF4G2P78344 907 aaKnown RBP eCLIP27.72■■■□□ 2.03
VEGFB-201ENST00000309422 ZNF772Q68DY9 489 aaPredicted RBP27.72■■■□□ 2.03
VEGFB-201ENST00000309422 PUS7Q96PZ0 661 aaKnown RBP27.72■■■□□ 2.03
VEGFB-201ENST00000309422 NINLQ9Y2I6 1382 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms