RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 DAXXQ9UER7 740 aaPredicted RBP20.39■□□□□ 0.86
CHAF1A-201ENST00000301280 POGKQ9P215 609 aa20.39■□□□□ 0.85
CHAF1A-201ENST00000301280 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
CHAF1A-201ENST00000301280 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
CHAF1A-201ENST00000301280 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.85
CHAF1A-201ENST00000301280 AMER1Q5JTC6 1135 aaPredicted RBP20.38■□□□□ 0.85
CHAF1A-201ENST00000301280 SHPRHQ149N8 1683 aa20.38■□□□□ 0.85
CHAF1A-201ENST00000301280 EIF3AQ14152 1382 aaKnown RBP20.38■□□□□ 0.85
CHAF1A-201ENST00000301280 ABCC3O15438 1527 aa20.37■□□□□ 0.85
CHAF1A-201ENST00000301280 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
CHAF1A-201ENST00000301280 CARD14Q9BXL6 1004 aa20.37■□□□□ 0.85
CHAF1A-201ENST00000301280 GGNBP2Q9H3C7 697 aa20.37■□□□□ 0.85
CHAF1A-201ENST00000301280 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.37■□□□□ 0.85
CHAF1A-201ENST00000301280 ARHGEF28Q8N1W1 1705 aaKnown RBP20.36■□□□□ 0.85
CHAF1A-201ENST00000301280 PDE4AP27815 886 aa20.35■□□□□ 0.85
CHAF1A-201ENST00000301280 FBXO31Q5XUX0 539 aaPredicted RBP20.35■□□□□ 0.85
CHAF1A-201ENST00000301280 COG6Q9Y2V7 657 aa20.35■□□□□ 0.85
CHAF1A-201ENST00000301280 NEO1Q92859 1461 aa20.35■□□□□ 0.85
CHAF1A-201ENST00000301280 ZNF521Q96K83 1311 aa20.34■□□□□ 0.85
CHAF1A-201ENST00000301280 DIP2CQ9Y2E4 1556 aa20.34■□□□□ 0.85
CHAF1A-201ENST00000301280 PANK1Q8TE04 598 aa20.34■□□□□ 0.85
CHAF1A-201ENST00000301280 MTHFSP49914 203 aa20.33■□□□□ 0.84
CHAF1A-201ENST00000301280 CENPJQ9HC77 1338 aaPredicted RBP20.32■□□□□ 0.84
CHAF1A-201ENST00000301280 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
CHAF1A-201ENST00000301280 SLC24A1O60721 1099 aa20.32■□□□□ 0.84
CHAF1A-201ENST00000301280 NOS1P29475 1434 aa20.31■□□□□ 0.84
CHAF1A-201ENST00000301280 NPATQ14207 1427 aa20.31■□□□□ 0.84
CHAF1A-201ENST00000301280 PLEKHH1Q9ULM0 1364 aa20.3■□□□□ 0.84
CHAF1A-201ENST00000301280 NEXMIFQ5QGS0 1516 aa20.3■□□□□ 0.84
CHAF1A-201ENST00000301280 GLI2P10070 1586 aa20.29■□□□□ 0.84
CHAF1A-201ENST00000301280 TNNQ9UQP3 1299 aa20.29■□□□□ 0.84
CHAF1A-201ENST00000301280 ARHGAP31Q2M1Z3 1444 aa20.28■□□□□ 0.84
CHAF1A-201ENST00000301280 ELL2O00472 640 aaPredicted RBP20.27■□□□□ 0.83
CHAF1A-201ENST00000301280 ARXQ96QS3 562 aa20.27■□□□□ 0.83
CHAF1A-201ENST00000301280 FAM69CQ0P6D2 419 aa20.26■□□□□ 0.83
CHAF1A-201ENST00000301280 CLTCQ00610 1675 aaKnown RBP20.26■□□□□ 0.83
CHAF1A-201ENST00000301280 IDI1Q13907 227 aa20.25■□□□□ 0.83
CHAF1A-201ENST00000301280 IPO9Q96P70 1041 aaKnown RBP20.25■□□□□ 0.83
CHAF1A-201ENST00000301280 DUSP27Q5VZP5 1158 aa20.25■□□□□ 0.83
CHAF1A-201ENST00000301280 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.25■□□□□ 0.83
CHAF1A-201ENST00000301280 CD109Q6YHK3 1445 aa20.25■□□□□ 0.83
CHAF1A-201ENST00000301280 TSR2Q969E8 191 aaKnown RBP20.24■□□□□ 0.83
CHAF1A-201ENST00000301280 MYO5BQ9ULV0 1848 aa20.24■□□□□ 0.83
CHAF1A-201ENST00000301280 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
CHAF1A-201ENST00000301280 TCP11L2Q8N4U5 519 aa20.24■□□□□ 0.83
CHAF1A-201ENST00000301280 ESF1Q9H501 851 aaKnown RBP20.24■□□□□ 0.83
CHAF1A-201ENST00000301280 PREX1Q8TCU6 1659 aa20.23■□□□□ 0.83
CHAF1A-201ENST00000301280 TRMT2AQ8IZ69 625 aaKnown RBP20.23■□□□□ 0.83
CHAF1A-201ENST00000301280 SPRYD3Q8NCJ5 442 aa20.23■□□□□ 0.83
CHAF1A-201ENST00000301280 ZFYVE9O95405 1425 aa20.22■□□□□ 0.83
CHAF1A-201ENST00000301280 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
CHAF1A-201ENST00000301280 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
CHAF1A-201ENST00000301280 WAPLQ7Z5K2 1190 aa20.2■□□□□ 0.82
CHAF1A-201ENST00000301280 RPGRIP1LQ68CZ1 1315 aa20.2■□□□□ 0.82
CHAF1A-201ENST00000301280 TMEM131LA2VDJ0 1609 aa20.2■□□□□ 0.82
CHAF1A-201ENST00000301280 NEFMP07197 916 aa20.2■□□□□ 0.82
CHAF1A-201ENST00000301280 VIRMAQ69YN4 1812 aaKnown RBP20.19■□□□□ 0.82
CHAF1A-201ENST00000301280 RTN4Q9NQC3 1192 aaKnown RBP20.19■□□□□ 0.82
CHAF1A-201ENST00000301280 CFAP53Q96M91 514 aa20.19■□□□□ 0.82
CHAF1A-201ENST00000301280 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
CHAF1A-201ENST00000301280 HMOX1P09601 288 aa20.17■□□□□ 0.82
CHAF1A-201ENST00000301280 PUS7Q96PZ0 661 aaKnown RBP20.17■□□□□ 0.82
CHAF1A-201ENST00000301280 IQSEC2Q5JU85 1478 aa20.17■□□□□ 0.82
CHAF1A-201ENST00000301280 POLR3AO14802 1390 aaPredicted RBP20.17■□□□□ 0.82
CHAF1A-201ENST00000301280 TULP4Q9NRJ4 1543 aa20.17■□□□□ 0.82
CHAF1A-201ENST00000301280 C14orf93Q9H972 538 aaKnown RBP20.16■□□□□ 0.82
CHAF1A-201ENST00000301280 SLFN5Q08AF3 891 aa20.15■□□□□ 0.82
CHAF1A-201ENST00000301280 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
CHAF1A-201ENST00000301280 VGFO15240 615 aaPredicted RBP20.14■□□□□ 0.81
CHAF1A-201ENST00000301280 WWC1Q8IX03 1113 aa20.14■□□□□ 0.81
CHAF1A-201ENST00000301280 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
CHAF1A-201ENST00000301280 THUMPD2Q9BTF0 503 aaKnown RBP20.13■□□□□ 0.81
CHAF1A-201ENST00000301280 ADGRB2O60241 1585 aa20.13■□□□□ 0.81
CHAF1A-201ENST00000301280 FTSJ3Q8IY81 847 aaKnown RBP20.13■□□□□ 0.81
CHAF1A-201ENST00000301280 NGEFQ8N5V2 710 aa20.13■□□□□ 0.81
CHAF1A-201ENST00000301280 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
CHAF1A-201ENST00000301280 MAPK8IP3Q9UPT6 1336 aa20.11■□□□□ 0.81
CHAF1A-201ENST00000301280 BACH2Q9BYV9 841 aa20.11■□□□□ 0.81
CHAF1A-201ENST00000301280 CGNL1Q0VF96 1302 aa20.1■□□□□ 0.81
CHAF1A-201ENST00000301280 IGHDP01880 384 aa20.1■□□□□ 0.81
CHAF1A-201ENST00000301280 EVC2Q86UK5 1308 aa20.1■□□□□ 0.81
CHAF1A-201ENST00000301280 MS4A1P11836 297 aa20.09■□□□□ 0.81
CHAF1A-201ENST00000301280 KDM2BQ8NHM5 1336 aa20.09■□□□□ 0.81
CHAF1A-201ENST00000301280 ZBTB7CA1YPR0 619 aa20.09■□□□□ 0.81
CHAF1A-201ENST00000301280 E9PSI1 815 aa20.09■□□□□ 0.81
CHAF1A-201ENST00000301280 TXNDC2Q86VQ3 553 aa20.09■□□□□ 0.81
CHAF1A-201ENST00000301280 SLKQ9H2G2 1235 aaPredicted RBP20.08■□□□□ 0.8
CHAF1A-201ENST00000301280 SMC4Q9NTJ3 1288 aa20.08■□□□□ 0.8
CHAF1A-201ENST00000301280 NCBP3Q53F19 620 aaKnown RBP20.07■□□□□ 0.8
CHAF1A-201ENST00000301280 ZRANB1Q9UGI0 708 aa20.07■□□□□ 0.8
CHAF1A-201ENST00000301280 NKTRP30414 1462 aaKnown RBP20.07■□□□□ 0.8
CHAF1A-201ENST00000301280 ITPRIPQ8IWB1 547 aa20.06■□□□□ 0.8
CHAF1A-201ENST00000301280 RLBP1P12271 317 aa20.04■□□□□ 0.8
CHAF1A-201ENST00000301280 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
CHAF1A-201ENST00000301280 AGLP35573 1532 aa20.04■□□□□ 0.8
CHAF1A-201ENST00000301280 APBB1O00213 710 aa20.04■□□□□ 0.8
CHAF1A-201ENST00000301280 MED14O60244 1454 aa20.04■□□□□ 0.8
CHAF1A-201ENST00000301280 EXOSC9Q06265 439 aaKnown RBP20.04■□□□□ 0.8
CHAF1A-201ENST00000301280 PTPRMP28827 1452 aa20.03■□□□□ 0.8
CHAF1A-201ENST00000301280 KIF20BQ96Q89 1820 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms