RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 CC2D2AQ9P2K1 1620 aa8.46□□□□□ -1.06
GAPVD1-202ENST00000297933 HMGB2P26583 209 aaKnown RBP8.46□□□□□ -1.06
GAPVD1-202ENST00000297933 PRAM1Q96QH2 718 aa8.46□□□□□ -1.06
GAPVD1-202ENST00000297933 DDX19BQ9UMR2 479 aa8.46□□□□□ -1.06
GAPVD1-202ENST00000297933 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
GAPVD1-202ENST00000297933 GZF1Q9H116 711 aaPredicted RBP8.46□□□□□ -1.06
GAPVD1-202ENST00000297933 ERC2O15083 957 aa8.45□□□□□ -1.06
GAPVD1-202ENST00000297933 SPG7Q9UQ90 795 aa8.45□□□□□ -1.06
GAPVD1-202ENST00000297933 PHF14O94880 888 aa8.45□□□□□ -1.06
GAPVD1-202ENST00000297933 SCAPERQ9BY12 1400 aa8.45□□□□□ -1.06
GAPVD1-202ENST00000297933 PRDM11Q9NQV5 511 aa8.45□□□□□ -1.06
GAPVD1-202ENST00000297933 PLEKHH2Q8IVE3 1493 aa8.45□□□□□ -1.06
GAPVD1-202ENST00000297933 NESP48681 1621 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 RAPGEF3O95398 923 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 SNAPC4Q5SXM2 1469 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 ATP6V1DQ9Y5K8 247 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 UBTFL1P0CB47 393 aaPredicted RBP8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 TBC1D2BQ9UPU7 963 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 MTMR7Q9Y216 660 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 R3HCC1Q9Y3T6 440 aaKnown RBP8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 FGD6Q6ZV73 1430 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 COG6Q9Y2V7 657 aa8.44□□□□□ -1.06
GAPVD1-202ENST00000297933 CCDC30Q5VVM6 783 aa8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 DZIP1LQ8IYY4 767 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 PCMTD1Q96MG8 357 aaPredicted RBP8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 SLC26A8Q96RN1 970 aa8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 TPM1P09493 284 aa8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 RALYLQ86SE5 291 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 SLC4A3P48751 1232 aa8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 ZNF692Q9BU19 519 aaPredicted RBP8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 CDK19Q9BWU1 502 aa8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 CNNM1Q9NRU3 951 aa8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 GNL3LQ9NVN8 582 aaKnown RBP8.43□□□□□ -1.06
GAPVD1-202ENST00000297933 CFAP70Q5T0N1 1121 aa8.42□□□□□ -1.06
GAPVD1-202ENST00000297933 REC8O95072 547 aa8.42□□□□□ -1.06
GAPVD1-202ENST00000297933 SLC52A1Q9NWF4 448 aa8.42□□□□□ -1.06
GAPVD1-202ENST00000297933 SLC3A2P08195 630 aaKnown RBP8.42□□□□□ -1.06
GAPVD1-202ENST00000297933 SAFBQ15424 915 aaKnown RBP eCLIP8.42□□□□□ -1.06
GAPVD1-202ENST00000297933 WWC2Q6AWC2 1192 aa8.42□□□□□ -1.06
GAPVD1-202ENST00000297933 CENPQQ7L2Z9 268 aaPredicted RBP8.42□□□□□ -1.06
GAPVD1-202ENST00000297933 RBM5P52756 815 aaKnown RBP eCLIP8.41□□□□□ -1.06
GAPVD1-202ENST00000297933 TMEM132AQ24JP5 1023 aa8.41□□□□□ -1.06
GAPVD1-202ENST00000297933 BRMS1Q9HCU9 246 aa8.41□□□□□ -1.06
GAPVD1-202ENST00000297933 HOOK1Q9UJC3 728 aaKnown RBP8.41□□□□□ -1.06
GAPVD1-202ENST00000297933 NCOA2Q15596 1464 aa8.41□□□□□ -1.06
GAPVD1-202ENST00000297933 CASKIN1Q8WXD9 1431 aa8.41□□□□□ -1.06
GAPVD1-202ENST00000297933 XPCQ01831 940 aaPredicted RBP8.41□□□□□ -1.06
GAPVD1-202ENST00000297933 GOLGA6L19H0YKK7 550 aa8.4□□□□□ -1.06
GAPVD1-202ENST00000297933 ANKRD20A12PQ8NF67 263 aa8.4□□□□□ -1.06
GAPVD1-202ENST00000297933 RTEL1-TNFRSF6BF6WH68 1400 aa8.4□□□□□ -1.06
GAPVD1-202ENST00000297933 MTHFSP49914 203 aa8.4□□□□□ -1.06
GAPVD1-202ENST00000297933 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-202ENST00000297933 TTC39AQ5SRH9 613 aa8.4□□□□□ -1.06
GAPVD1-202ENST00000297933 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
GAPVD1-202ENST00000297933 DMRT2Q9Y5R5 561 aa8.4□□□□□ -1.07
GAPVD1-202ENST00000297933 BECN2A8MW95 431 aa8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 XBP1P17861 261 aa8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 ZNF530Q6P9A1 599 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 GOLGA6L1Q8N7Z2 621 aa8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 RTN4Q9NQC3 1192 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 PNISRQ8TF01 805 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 CRBNQ96SW2 442 aa8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 PRKRIP1Q9H875 184 aaPredicted RBP8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 NINLQ9Y2I6 1382 aa8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 SART3Q15020 963 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 DNAJC2Q99543 621 aaKnown RBP8.39□□□□□ -1.07
GAPVD1-202ENST00000297933 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 CCDC158Q5M9N0 1113 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 FOSBP53539 338 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 BICDL1Q6ZP65 573 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 CABP1Q9NZU7 370 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 FSD1Q9BTV5 496 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 ADAMTS2O95450 1211 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 C9orf84Q5VXU9 1444 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 LRRC9Q6ZRR7 1453 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 PRKAR2BP31323 418 aa8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 RRP1P56182 461 aaKnown RBP8.38□□□□□ -1.07
GAPVD1-202ENST00000297933 INTS3Q68E01 1043 aaKnown RBP8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 KIF21BO75037 1637 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 GOLGA6L3A6NEY3 463 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 GNAI3P08754 354 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 ZC3H6P61129 1189 aaKnown RBP8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 CNTROBQ8N137 903 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 CLASRPQ8N2M8 674 aaKnown RBP8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 MYL6BP14649 208 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 SULT6B1Q6IMI4 303 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
GAPVD1-202ENST00000297933 TOPBP1Q92547 1522 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 IPO7O95373 1038 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 CFTRP13569 1480 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 ERBINQ96RT1 1412 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 CNTLNQ9NXG0 1405 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 RPGRIP1LQ68CZ1 1315 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 RRP12Q5JTH9 1297 aaKnown RBP8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 ERC1Q8IUD2 1116 aa8.36□□□□□ -1.07
GAPVD1-202ENST00000297933 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.36□□□□□ -1.071e-6■■■■□ 20.7
GAPVD1-202ENST00000297933 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.075e-7■■■■■ 59
GAPVD1-202ENST00000297933 DDX11L8A8MPP1 907 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms