RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 KIAA0586Q9BVV6 1533 aa21.08■□□□□ 0.96
CDCP1-201ENST00000296129 INTS3Q68E01 1043 aaKnown RBP21.08■□□□□ 0.96
CDCP1-201ENST00000296129 MSH5O43196 834 aa21.08■□□□□ 0.96
CDCP1-201ENST00000296129 RIC3Q7Z5B4 369 aa21.08■□□□□ 0.96
CDCP1-201ENST00000296129 CDK19Q9BWU1 502 aa21.07■□□□□ 0.96
CDCP1-201ENST00000296129 MCTP1Q6DN14 999 aa21.07■□□□□ 0.96
CDCP1-201ENST00000296129 ARID3AQ99856 593 aa21.07■□□□□ 0.96
CDCP1-201ENST00000296129 SKOR2Q2VWA4 1001 aaPredicted RBP21.06■□□□□ 0.96
CDCP1-201ENST00000296129 CHMP4CQ96CF2 233 aa21.06■□□□□ 0.96
CDCP1-201ENST00000296129 WDR97A6NE52 1622 aa21.06■□□□□ 0.96
CDCP1-201ENST00000296129 ESCO1Q5FWF5 840 aa21.06■□□□□ 0.96
CDCP1-201ENST00000296129 AAMPQ13685 434 aa21.06■□□□□ 0.96
CDCP1-201ENST00000296129 GPRASP1Q5JY77 1395 aa21.06■□□□□ 0.96
CDCP1-201ENST00000296129 MARCH6O60337 910 aa21.06■□□□□ 0.96
CDCP1-201ENST00000296129 AKAP17AQ02040 695 aaKnown RBP21.06■□□□□ 0.96
CDCP1-201ENST00000296129 SYNE3Q6ZMZ3 975 aa21.05■□□□□ 0.96
CDCP1-201ENST00000296129 VPS53Q5VIR6 699 aa21.05■□□□□ 0.96
CDCP1-201ENST00000296129 APPP05067 770 aa21.05■□□□□ 0.96
CDCP1-201ENST00000296129 EXOSC9Q06265 439 aaKnown RBP21.05■□□□□ 0.96
CDCP1-201ENST00000296129 HSP90AB4PQ58FF6 505 aa21.05■□□□□ 0.96
CDCP1-201ENST00000296129 RAPGEF3O95398 923 aa21.04■□□□□ 0.96
CDCP1-201ENST00000296129 UBTFL1P0CB47 393 aaPredicted RBP21.04■□□□□ 0.96
CDCP1-201ENST00000296129 CABP1Q9NZU7 370 aa21.03■□□□□ 0.96
CDCP1-201ENST00000296129 CUL7Q14999 1698 aa21.03■□□□□ 0.96
CDCP1-201ENST00000296129 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
CDCP1-201ENST00000296129 GSE1Q14687 1217 aa21.03■□□□□ 0.96
CDCP1-201ENST00000296129 GAS2L2Q8NHY3 880 aa21.03■□□□□ 0.96
CDCP1-201ENST00000296129 MEX3CQ5U5Q3 659 aaKnown RBP21.02■□□□□ 0.96
CDCP1-201ENST00000296129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.96
CDCP1-201ENST00000296129 C22orf23Q9BZE7 217 aa21.02■□□□□ 0.96
CDCP1-201ENST00000296129 NAIPQ13075 1403 aa21.02■□□□□ 0.96
CDCP1-201ENST00000296129 ERC2O15083 957 aa21.02■□□□□ 0.95
CDCP1-201ENST00000296129 RNF20Q5VTR2 975 aa21.01■□□□□ 0.95
CDCP1-201ENST00000296129 BICRAQ9NZM4 1560 aa21.01■□□□□ 0.95
CDCP1-201ENST00000296129 VPS37DQ86XT2 251 aa21.01■□□□□ 0.95
CDCP1-201ENST00000296129 NOL10Q9BSC4 688 aaKnown RBP21.01■□□□□ 0.95
CDCP1-201ENST00000296129 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
CDCP1-201ENST00000296129 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
CDCP1-201ENST00000296129 CCDC30Q5VVM6 783 aa21■□□□□ 0.95
CDCP1-201ENST00000296129 TSR2Q969E8 191 aaKnown RBP21■□□□□ 0.95
CDCP1-201ENST00000296129 SLC52A1Q9NWF4 448 aa21■□□□□ 0.95
CDCP1-201ENST00000296129 CHMP5Q9NZZ3 219 aa21■□□□□ 0.95
CDCP1-201ENST00000296129 CAMSAP2Q08AD1 1489 aa20.99■□□□□ 0.95
CDCP1-201ENST00000296129 PTPN23Q9H3S7 1636 aa20.99■□□□□ 0.95
CDCP1-201ENST00000296129 AMOTL1Q8IY63 956 aa20.99■□□□□ 0.95
CDCP1-201ENST00000296129 CDC45O75419 566 aa20.99■□□□□ 0.95
CDCP1-201ENST00000296129 TWISTNBQ3B726 338 aaPredicted RBP20.99■□□□□ 0.95
CDCP1-201ENST00000296129 CPLX2Q6PUV4 134 aaKnown RBP20.98■□□□□ 0.95
CDCP1-201ENST00000296129 NEUROD6Q96NK8 337 aa20.98■□□□□ 0.95
CDCP1-201ENST00000296129 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
CDCP1-201ENST00000296129 TRIM29Q14134 588 aa20.97■□□□□ 0.95
CDCP1-201ENST00000296129 AKNAQ7Z591 1439 aa20.97■□□□□ 0.95
CDCP1-201ENST00000296129 NOB1Q9ULX3 412 aaKnown RBP20.97■□□□□ 0.95
CDCP1-201ENST00000296129 CCDC141Q6ZP82 1450 aa20.97■□□□□ 0.95
CDCP1-201ENST00000296129 GOLGA6L19H0YKK7 550 aa20.97■□□□□ 0.95
CDCP1-201ENST00000296129 CPLX1O14810 134 aa20.97■□□□□ 0.95
CDCP1-201ENST00000296129 PROSER2Q86WR7 435 aaPredicted RBP20.97■□□□□ 0.95
CDCP1-201ENST00000296129 RTEL1-TNFRSF6BF6WH68 1400 aa20.97■□□□□ 0.95
CDCP1-201ENST00000296129 TPD52L1Q16890 204 aaPredicted RBP20.97■□□□□ 0.95
CDCP1-201ENST00000296129 SMG6Q86US8 1419 aaKnown RBP20.96■□□□□ 0.95
CDCP1-201ENST00000296129 NOC3LQ8WTT2 800 aaKnown RBP20.96■□□□□ 0.95
CDCP1-201ENST00000296129 BCAR3O75815 825 aa20.96■□□□□ 0.95
CDCP1-201ENST00000296129 PLEKHO1Q53GL0 409 aaPredicted RBP20.96■□□□□ 0.95
CDCP1-201ENST00000296129 C1orf115Q9H7X2 142 aa20.96■□□□□ 0.95
CDCP1-201ENST00000296129 TRDNQ13061 729 aa20.96■□□□□ 0.95
CDCP1-201ENST00000296129 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
CDCP1-201ENST00000296129 PES1O00541 588 aaKnown RBP20.95■□□□□ 0.95
CDCP1-201ENST00000296129 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
CDCP1-201ENST00000296129 THEMISQ8N1K5 641 aaPredicted RBP20.95■□□□□ 0.94
CDCP1-201ENST00000296129 SULT6B1Q6IMI4 303 aa20.95■□□□□ 0.94
CDCP1-201ENST00000296129 BECN2A8MW95 431 aa20.94■□□□□ 0.94
CDCP1-201ENST00000296129 RAD21O60216 631 aa20.94■□□□□ 0.94
CDCP1-201ENST00000296129 PLB1Q6P1J6 1458 aa20.94■□□□□ 0.94
CDCP1-201ENST00000296129 SMC3Q9UQE7 1217 aa20.94■□□□□ 0.94
CDCP1-201ENST00000296129 ZNF692Q9BU19 519 aaPredicted RBP20.94■□□□□ 0.94
CDCP1-201ENST00000296129 NFXL1Q6ZNB6 911 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 FBXW7Q969H0 707 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.93■□□□□ 0.94
CDCP1-201ENST00000296129 KIF14Q15058 1648 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 VPS37CA5D8V6 355 aaPredicted RBP20.93■□□□□ 0.94
CDCP1-201ENST00000296129 GNAI3P08754 354 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 CCDC184Q52MB2 194 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 PDZRN3Q9UPQ7 1066 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 ANKRD30BQ9BXX2 1392 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 NINLQ9Y2I6 1382 aa20.93■□□□□ 0.94
CDCP1-201ENST00000296129 TRIM34Q9BYJ4 488 aa20.92■□□□□ 0.94
CDCP1-201ENST00000296129 FOSBP53539 338 aa20.92■□□□□ 0.94
CDCP1-201ENST00000296129 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
CDCP1-201ENST00000296129 TPM3P06753 285 aa20.9■□□□□ 0.94
CDCP1-201ENST00000296129 PDE3AQ14432 1141 aa20.9■□□□□ 0.94
CDCP1-201ENST00000296129 WASHC4Q2M389 1173 aa20.9■□□□□ 0.94
CDCP1-201ENST00000296129 CNTROBQ8N137 903 aa20.9■□□□□ 0.94
CDCP1-201ENST00000296129 ABCC5O15440 1437 aa20.9■□□□□ 0.94
CDCP1-201ENST00000296129 BICD2Q8TD16 824 aa20.9■□□□□ 0.94
CDCP1-201ENST00000296129 NUCB2P80303 420 aa20.89■□□□□ 0.93
CDCP1-201ENST00000296129 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.89■□□□□ 0.93
CDCP1-201ENST00000296129 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.93
CDCP1-201ENST00000296129 ERICH2A1L162 156 aa20.88■□□□□ 0.93
CDCP1-201ENST00000296129 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
CDCP1-201ENST00000296129 GRIN2AQ12879 1464 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms