RNA–Protein interactions for RNA: ENST00000295901.8

PSMD6-201, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD6, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-201ENST00000295901 KNDC1Q76NI1 1749 aa27.52■■■□□ 2
PSMD6-201ENST00000295901 XRN1Q8IZH2 1706 aaKnown RBP27.52■■■□□ 2
PSMD6-201ENST00000295901 CHD2O14647 1828 aaKnown RBP27.52■■■□□ 2
PSMD6-201ENST00000295901 HIRIP3Q9BW71 556 aaPredicted RBP27.51■■□□□ 1.99
PSMD6-201ENST00000295901 WAPLQ7Z5K2 1190 aa27.5■■□□□ 1.99
PSMD6-201ENST00000295901 NWD1Q149M9 1564 aa27.5■■□□□ 1.99
PSMD6-201ENST00000295901 PHF23Q9BUL5 403 aaPredicted RBP27.49■■□□□ 1.99
PSMD6-201ENST00000295901 ARHGEF28Q8N1W1 1705 aaKnown RBP27.48■■□□□ 1.99
PSMD6-201ENST00000295901 TESK2Q96S53 571 aa27.48■■□□□ 1.99
PSMD6-201ENST00000295901 PLEKHH1Q9ULM0 1364 aa27.47■■□□□ 1.99
PSMD6-201ENST00000295901 SLC24A1O60721 1099 aa27.47■■□□□ 1.99
PSMD6-201ENST00000295901 SBNO2Q9Y2G9 1366 aa27.46■■□□□ 1.99
PSMD6-201ENST00000295901 NKTRP30414 1462 aaKnown RBP27.46■■□□□ 1.99
PSMD6-201ENST00000295901 SAFB2Q14151 953 aaKnown RBP eCLIP27.45■■□□□ 1.98
PSMD6-201ENST00000295901 PROSER2Q86WR7 435 aaPredicted RBP27.42■■□□□ 1.98
PSMD6-201ENST00000295901 ZNF316A6NFI3 1004 aaPredicted RBP27.4■■□□□ 1.98
PSMD6-201ENST00000295901 RBM33Q96EV2 1170 aaKnown RBP27.4■■□□□ 1.98
PSMD6-201ENST00000295901 TMF1P82094 1093 aa27.39■■□□□ 1.97
PSMD6-201ENST00000295901 TMEM94Q12767 1356 aa27.39■■□□□ 1.97
PSMD6-201ENST00000295901 MINK1Q8N4C8 1332 aaPredicted RBP27.38■■□□□ 1.97
PSMD6-201ENST00000295901 QRICH2Q9H0J4 1663 aa27.37■■□□□ 1.97
PSMD6-201ENST00000295901 NCOA3Q9Y6Q9 1424 aa27.35■■□□□ 1.97
PSMD6-201ENST00000295901 EVC2Q86UK5 1308 aa27.34■■□□□ 1.97
PSMD6-201ENST00000295901 C11orf95C9JLR9 678 aaPredicted RBP27.33■■□□□ 1.97
PSMD6-201ENST00000295901 CDCA8Q53HL2 280 aa27.32■■□□□ 1.96
PSMD6-201ENST00000295901 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.31■■□□□ 1.96
PSMD6-201ENST00000295901 WASLO00401 505 aaPredicted RBP27.31■■□□□ 1.96
PSMD6-201ENST00000295901 ROBO1Q9Y6N7 1651 aa27.3■■□□□ 1.96
PSMD6-201ENST00000295901 ADGRL3Q9HAR2 1447 aa27.3■■□□□ 1.96
PSMD6-201ENST00000295901 C14orf37Q86TY3 774 aa27.29■■□□□ 1.96
PSMD6-201ENST00000295901 PUS7Q96PZ0 661 aaKnown RBP27.29■■□□□ 1.96
PSMD6-201ENST00000295901 TULP4Q9NRJ4 1543 aa27.28■■□□□ 1.96
PSMD6-201ENST00000295901 CDK19Q9BWU1 502 aa27.28■■□□□ 1.96
PSMD6-201ENST00000295901 ADGRB2O60241 1585 aa27.28■■□□□ 1.96
PSMD6-201ENST00000295901 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
PSMD6-201ENST00000295901 KIF7Q2M1P5 1343 aa27.27■■□□□ 1.96
PSMD6-201ENST00000295901 WASHC2AQ641Q2 1341 aa27.27■■□□□ 1.96
PSMD6-201ENST00000295901 CCDC7Q96M83 1385 aa27.25■■□□□ 1.95
PSMD6-201ENST00000295901 SRPK2P78362 688 aaKnown RBP27.24■■□□□ 1.95
PSMD6-201ENST00000295901 CABP2Q9NPB3 220 aa27.24■■□□□ 1.95
PSMD6-201ENST00000295901 RGS17Q9UGC6 210 aaPredicted RBP27.24■■□□□ 1.95
PSMD6-201ENST00000295901 NALCNQ8IZF0 1738 aa27.21■■□□□ 1.95
PSMD6-201ENST00000295901 MSH6P52701 1360 aa27.21■■□□□ 1.95
PSMD6-201ENST00000295901 POLR3GLQ9BT43 218 aa27.2■■□□□ 1.94
PSMD6-201ENST00000295901 CDC42BPGQ6DT37 1551 aa27.2■■□□□ 1.94
PSMD6-201ENST00000295901 ATAD2Q6PL18 1390 aa27.19■■□□□ 1.94
PSMD6-201ENST00000295901 DCCP43146 1447 aa27.19■■□□□ 1.94
PSMD6-201ENST00000295901 PHLPP1O60346 1717 aa27.17■■□□□ 1.94
PSMD6-201ENST00000295901 ATF3P18847 181 aa27.16■■□□□ 1.94
PSMD6-201ENST00000295901 NUDT16Q96DE0 195 aaKnown RBP27.16■■□□□ 1.94
PSMD6-201ENST00000295901 SLAIN2Q9P270 581 aa27.16■■□□□ 1.94
PSMD6-201ENST00000295901 CADPS2Q86UW7 1296 aa27.16■■□□□ 1.94
PSMD6-201ENST00000295901 CCDC61Q9Y6R9 512 aa27.15■■□□□ 1.94
PSMD6-201ENST00000295901 ANKARQ7Z5J8 1434 aa27.14■■□□□ 1.94
PSMD6-201ENST00000295901 PRR36Q9H6K5 1346 aa27.14■■□□□ 1.93
PSMD6-201ENST00000295901 NUTM2FA1L443 756 aa27.13■■□□□ 1.93
PSMD6-201ENST00000295901 ATP7BP35670 1465 aa27.12■■□□□ 1.93
PSMD6-201ENST00000295901 NINLQ9Y2I6 1382 aa27.11■■□□□ 1.93
PSMD6-201ENST00000295901 FMN2Q9NZ56 1722 aa27.1■■□□□ 1.93
PSMD6-201ENST00000295901 POTEAQ6S8J7 498 aa27.09■■□□□ 1.93
PSMD6-201ENST00000295901 TMC1Q8TDI8 760 aa27.09■■□□□ 1.93
PSMD6-201ENST00000295901 SLC12A5Q9H2X9 1139 aa27.08■■□□□ 1.93
PSMD6-201ENST00000295901 CABP1Q9NZU7 370 aa27.08■■□□□ 1.93
PSMD6-201ENST00000295901 MST1RQ04912 1400 aa27.07■■□□□ 1.92
PSMD6-201ENST00000295901 DDX10Q13206 875 aaKnown RBP27.07■■□□□ 1.92
PSMD6-201ENST00000295901 PPIP5K1Q6PFW1 1433 aa27.06■■□□□ 1.92
PSMD6-201ENST00000295901 USP32Q8NFA0 1604 aa27.06■■□□□ 1.92
PSMD6-201ENST00000295901 PLEKHG3A1L390 1219 aa27.05■■□□□ 1.92
PSMD6-201ENST00000295901 C1orf167Q5SNV9 1468 aa27.05■■□□□ 1.92
PSMD6-201ENST00000295901 JCADQ9P266 1359 aa27.02■■□□□ 1.92
PSMD6-201ENST00000295901 ESCO1Q5FWF5 840 aa27.02■■□□□ 1.92
PSMD6-201ENST00000295901 COL16A1Q07092 1604 aaPredicted RBP27.02■■□□□ 1.92
PSMD6-201ENST00000295901 PANK3Q9H999 370 aa27.01■■□□□ 1.91
PSMD6-201ENST00000295901 TERF2IPQ9NYB0 399 aa27■■□□□ 1.91
PSMD6-201ENST00000295901 PHF8Q9UPP1 1060 aa27■■□□□ 1.91
PSMD6-201ENST00000295901 MYOM1P52179 1685 aa27■■□□□ 1.91
PSMD6-201ENST00000295901 ORAI2Q96SN7 254 aa26.99■■□□□ 1.91
PSMD6-201ENST00000295901 TOPAZ1Q8N9V7 1692 aa26.99■■□□□ 1.91
PSMD6-201ENST00000295901 ANKRD36BQ8N2N9 1353 aa26.99■■□□□ 1.91
PSMD6-201ENST00000295901 PMFBP1Q8TBY8 1022 aa26.99■■□□□ 1.91
PSMD6-201ENST00000295901 HDGFL2Q7Z4V5 671 aaPredicted RBP26.98■■□□□ 1.91
PSMD6-201ENST00000295901 ZNF692Q9BU19 519 aaPredicted RBP26.97■■□□□ 1.91
PSMD6-201ENST00000295901 ACEP12821 1306 aa26.97■■□□□ 1.91
PSMD6-201ENST00000295901 CPSF1Q10570 1443 aaKnown RBP26.96■■□□□ 1.91
PSMD6-201ENST00000295901 CD163L1Q9NR16 1453 aa26.96■■□□□ 1.91
PSMD6-201ENST00000295901 POLR3AO14802 1390 aaPredicted RBP26.96■■□□□ 1.91
PSMD6-201ENST00000295901 ITSN1Q15811 1721 aa26.96■■□□□ 1.91
PSMD6-201ENST00000295901 NGDNQ8NEJ9 315 aaKnown RBP26.95■■□□□ 1.9
PSMD6-201ENST00000295901 A0A1W2PP64 1363 aa26.95■■□□□ 1.9
PSMD6-201ENST00000295901 RGPD8O14715 1765 aaPredicted RBP26.93■■□□□ 1.9
PSMD6-201ENST00000295901 PER1O15534 1290 aaPredicted RBP26.92■■□□□ 1.9
PSMD6-201ENST00000295901 CARD14Q9BXL6 1004 aa26.92■■□□□ 1.9
PSMD6-201ENST00000295901 AHDC1Q5TGY3 1603 aaPredicted RBP26.92■■□□□ 1.9
PSMD6-201ENST00000295901 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
PSMD6-201ENST00000295901 KTN1Q86UP2 1357 aaKnown RBP26.9■■□□□ 1.9
PSMD6-201ENST00000295901 LRP6O75581 1613 aa26.89■■□□□ 1.9
PSMD6-201ENST00000295901 SHPRHQ149N8 1683 aa26.89■■□□□ 1.89
PSMD6-201ENST00000295901 FOXO3O43524 673 aa26.88■■□□□ 1.89
PSMD6-201ENST00000295901 MEX3CQ5U5Q3 659 aaKnown RBP26.88■■□□□ 1.89
PSMD6-201ENST00000295901 KNSTRNQ9Y448 316 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms