RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 GPATCH8Q9UKJ3 1502 aaKnown RBP20.46■□□□□ 0.87
CDS1-201ENST00000295887 ANO2Q9NQ90 1003 aa20.45■□□□□ 0.86
CDS1-201ENST00000295887 EIF2S2P20042 333 aaKnown RBP20.45■□□□□ 0.86
CDS1-201ENST00000295887 FKBP5Q13451 457 aaPredicted RBP20.45■□□□□ 0.86
CDS1-201ENST00000295887 ZNF330Q9Y3S2 320 aaPredicted RBP20.44■□□□□ 0.86
CDS1-201ENST00000295887 PLEKHH2Q8IVE3 1493 aa20.44■□□□□ 0.86
CDS1-201ENST00000295887 CABP1Q9NZU7 370 aa20.44■□□□□ 0.86
CDS1-201ENST00000295887 HSP90AA2PQ14568 343 aaPredicted RBP20.43■□□□□ 0.86
CDS1-201ENST00000295887 MCTP1Q6DN14 999 aa20.43■□□□□ 0.86
CDS1-201ENST00000295887 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
CDS1-201ENST00000295887 RARSP54136 660 aaKnown RBP20.43■□□□□ 0.86
CDS1-201ENST00000295887 ADGRF5Q8IZF2 1346 aa20.41■□□□□ 0.86
CDS1-201ENST00000295887 CDC45O75419 566 aa20.41■□□□□ 0.86
CDS1-201ENST00000295887 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
CDS1-201ENST00000295887 CHMP3Q9Y3E7 222 aa20.41■□□□□ 0.86
CDS1-201ENST00000295887 CSB-PGBD3P0DP91 1061 aa20.41■□□□□ 0.86
CDS1-201ENST00000295887 TWISTNBQ3B726 338 aaPredicted RBP20.41■□□□□ 0.86
CDS1-201ENST00000295887 TSPYL4Q9UJ04 414 aa20.41■□□□□ 0.86
CDS1-201ENST00000295887 GPATCH3Q96I76 525 aa20.4■□□□□ 0.86
CDS1-201ENST00000295887 NUP153P49790 1475 aaKnown RBP20.4■□□□□ 0.86
CDS1-201ENST00000295887 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.39■□□□□ 0.86
CDS1-201ENST00000295887 MRE11P49959 708 aa20.39■□□□□ 0.85
CDS1-201ENST00000295887 GOLGA6L6A8MZA4 724 aa20.38■□□□□ 0.85
CDS1-201ENST00000295887 IGHDP01880 384 aa20.38■□□□□ 0.85
CDS1-201ENST00000295887 TMPOP42166 694 aaKnown RBP20.38■□□□□ 0.85
CDS1-201ENST00000295887 THUMPD2Q9BTF0 503 aaKnown RBP20.38■□□□□ 0.85
CDS1-201ENST00000295887 CHMP4AQ9BY43 222 aa20.38■□□□□ 0.85
CDS1-201ENST00000295887 DHX29Q7Z478 1369 aaKnown RBP20.38■□□□□ 0.85
CDS1-201ENST00000295887 TMEM57Q8N5G2 664 aa20.38■□□□□ 0.85
CDS1-201ENST00000295887 CCDC9Q9Y3X0 531 aaKnown RBP20.37■□□□□ 0.85
CDS1-201ENST00000295887 NUCB2P80303 420 aa20.37■□□□□ 0.85
CDS1-201ENST00000295887 ATP10BO94823 1461 aa20.37■□□□□ 0.85
CDS1-201ENST00000295887 NRDCO43847 1150 aa20.37■□□□□ 0.85
CDS1-201ENST00000295887 CDK19Q9BWU1 502 aa20.37■□□□□ 0.85
CDS1-201ENST00000295887 SSH1Q8WYL5 1049 aa20.36■□□□□ 0.85
CDS1-201ENST00000295887 NKTRP30414 1462 aaKnown RBP20.36■□□□□ 0.85
CDS1-201ENST00000295887 TEFQ10587 303 aa20.36■□□□□ 0.85
CDS1-201ENST00000295887 HSP90B1P14625 803 aaKnown RBP20.36■□□□□ 0.85
CDS1-201ENST00000295887 NINLQ9Y2I6 1382 aa20.36■□□□□ 0.85
CDS1-201ENST00000295887 CFAP43Q8NDM7 1665 aa20.36■□□□□ 0.85
CDS1-201ENST00000295887 LRPPRCP42704 1394 aaKnown RBP20.35■□□□□ 0.85
CDS1-201ENST00000295887 PHF14O94880 888 aa20.35■□□□□ 0.85
CDS1-201ENST00000295887 NUTM2GQ5VZR2 741 aa20.35■□□□□ 0.85
CDS1-201ENST00000295887 MCM4P33991 863 aa20.34■□□□□ 0.85
CDS1-201ENST00000295887 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
CDS1-201ENST00000295887 DIAPH3Q9NSV4 1193 aa20.34■□□□□ 0.85
CDS1-201ENST00000295887 TXNDC2Q86VQ3 553 aa20.33■□□□□ 0.85
CDS1-201ENST00000295887 CHD1LQ86WJ1 897 aa20.33■□□□□ 0.85
CDS1-201ENST00000295887 RALGAPBQ86X10 1494 aa20.33■□□□□ 0.85
CDS1-201ENST00000295887 HDAC5Q9UQL6 1122 aa20.33■□□□□ 0.85
CDS1-201ENST00000295887 TESK2Q96S53 571 aa20.33■□□□□ 0.84
CDS1-201ENST00000295887 FAM43AQ8N2R8 423 aa20.32■□□□□ 0.84
CDS1-201ENST00000295887 GCC1Q96CN9 775 aa20.32■□□□□ 0.84
CDS1-201ENST00000295887 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
CDS1-201ENST00000295887 RNF214Q8ND24 703 aa20.32■□□□□ 0.84
CDS1-201ENST00000295887 PARD3Q8TEW0 1356 aa20.32■□□□□ 0.84
CDS1-201ENST00000295887 KIF14Q15058 1648 aa20.32■□□□□ 0.84
CDS1-201ENST00000295887 TCOF1Q13428 1488 aaKnown RBP20.32■□□□□ 0.84
CDS1-201ENST00000295887 CT47B1P0C2W7 299 aaPredicted RBP20.32■□□□□ 0.84
CDS1-201ENST00000295887 CAVIN1Q6NZI2 390 aaKnown RBP20.32■□□□□ 0.84
CDS1-201ENST00000295887 NASPP49321 788 aaPredicted RBP20.31■□□□□ 0.84
CDS1-201ENST00000295887 SULT6B1Q6IMI4 303 aa20.31■□□□□ 0.84
CDS1-201ENST00000295887 C9orf78Q9NZ63 289 aaPredicted RBP20.31■□□□□ 0.84
CDS1-201ENST00000295887 NEK4P51957 841 aa20.31■□□□□ 0.84
CDS1-201ENST00000295887 CD109Q6YHK3 1445 aa20.3■□□□□ 0.84
CDS1-201ENST00000295887 PER1O15534 1290 aaPredicted RBP20.3■□□□□ 0.84
CDS1-201ENST00000295887 GNL2Q13823 731 aaKnown RBP20.3■□□□□ 0.84
CDS1-201ENST00000295887 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
CDS1-201ENST00000295887 RRS1Q15050 365 aaKnown RBP20.29■□□□□ 0.84
CDS1-201ENST00000295887 CSPP1Q1MSJ5 1256 aa20.29■□□□□ 0.84
CDS1-201ENST00000295887 VSIG10Q8N0Z9 540 aa20.29■□□□□ 0.84
CDS1-201ENST00000295887 TBC1D2Q9BYX2 928 aa20.28■□□□□ 0.84
CDS1-201ENST00000295887 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
CDS1-201ENST00000295887 SLC4A2P04920 1241 aa20.28■□□□□ 0.84
CDS1-201ENST00000295887 SLC26A8Q96RN1 970 aa20.28■□□□□ 0.84
CDS1-201ENST00000295887 PRPF40AO75400 957 aaKnown RBP20.27■□□□□ 0.83
CDS1-201ENST00000295887 ADGRL1O94910 1474 aa20.26■□□□□ 0.83
CDS1-201ENST00000295887 FBXO31Q5XUX0 539 aaPredicted RBP20.26■□□□□ 0.83
CDS1-201ENST00000295887 ATP6V1DQ9Y5K8 247 aa20.26■□□□□ 0.83
CDS1-201ENST00000295887 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
CDS1-201ENST00000295887 PRAG1Q86YV5 1406 aa20.26■□□□□ 0.83
CDS1-201ENST00000295887 TRIM27P14373 513 aa20.26■□□□□ 0.83
CDS1-201ENST00000295887 VPS37CA5D8V6 355 aaPredicted RBP20.25■□□□□ 0.83
CDS1-201ENST00000295887 NLRP6P59044 892 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 SCAF11Q99590 1463 aaKnown RBP20.25■□□□□ 0.83
CDS1-201ENST00000295887 FAM13BQ9NYF5 915 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 RABEP1Q15276 862 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 CTTNBP2Q8WZ74 1663 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 RAPGEF6Q8TEU7 1601 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 FCHSD2O94868 740 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 PLEKHH1Q9ULM0 1364 aa20.25■□□□□ 0.83
CDS1-201ENST00000295887 K7ELQ4 463 aaPredicted RBP20.24■□□□□ 0.83
CDS1-201ENST00000295887 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
CDS1-201ENST00000295887 DCTN1Q14203 1278 aa20.24■□□□□ 0.83
CDS1-201ENST00000295887 C1orf141Q5JVX7 400 aa20.24■□□□□ 0.83
CDS1-201ENST00000295887 ADAMTS12P58397 1594 aa20.24■□□□□ 0.83
CDS1-201ENST00000295887 UBTFL1P0CB47 393 aaPredicted RBP20.24■□□□□ 0.83
CDS1-201ENST00000295887 ZKSCAN1P17029 563 aaPredicted RBP20.24■□□□□ 0.83
CDS1-201ENST00000295887 PZPP20742 1482 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms