RNA–Protein interactions for RNA: ENST00000295706.8

PPFIA4-202, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPFIA4, Length 6,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-202ENST00000295706 PDE3BQ13370 1112 aa16.15■□□□□ 0.18
PPFIA4-202ENST00000295706 GOLGA6L10A0A0M3HER8 536 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 CCDC181Q5TID7 509 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 TSPY26PQ9H489 355 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 HMGN5P82970 282 aaKnown RBP16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 CCP110O43303 1012 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 RSPH4AQ5TD94 716 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 PRDM10Q9NQV6 1147 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 SYCP1Q15431 976 aa16.14■□□□□ 0.17
PPFIA4-202ENST00000295706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 FILIP1LQ4L180 1135 aa16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 MAGEC2Q9UBF1 373 aaPredicted RBP16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 TRAK2O60296 914 aa16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 RRP1P56182 461 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 VPS37DQ86XT2 251 aa16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 IPO4Q8TEX9 1081 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 NECTIN2Q92692 538 aa16.13■□□□□ 0.17
PPFIA4-202ENST00000295706 TMEM132AQ24JP5 1023 aa16.12■□□□□ 0.17
PPFIA4-202ENST00000295706 CCDC102AQ96A19 550 aa16.12■□□□□ 0.17
PPFIA4-202ENST00000295706 C9orf78Q9NZ63 289 aaPredicted RBP16.12■□□□□ 0.17
PPFIA4-202ENST00000295706 FYB1O15117 783 aa16.12■□□□□ 0.17
PPFIA4-202ENST00000295706 EIF3JO75822 258 aaKnown RBP16.12■□□□□ 0.17
PPFIA4-202ENST00000295706 CCDC112Q8NEF3 446 aa16.11■□□□□ 0.17
PPFIA4-202ENST00000295706 ATP2B1P20020 1258 aa16.11■□□□□ 0.17
PPFIA4-202ENST00000295706 EIF2S2P20042 333 aaKnown RBP16.11■□□□□ 0.17
PPFIA4-202ENST00000295706 BCCIPQ9P287 314 aaKnown RBP eCLIP16.11■□□□□ 0.17
PPFIA4-202ENST00000295706 ZNF526Q8TF50 670 aaPredicted RBP16.1■□□□□ 0.17
PPFIA4-202ENST00000295706 INTS3Q68E01 1043 aaKnown RBP16.1■□□□□ 0.17
PPFIA4-202ENST00000295706 TRERF1Q96PN7 1200 aa16.1■□□□□ 0.17
PPFIA4-202ENST00000295706 C22orf23Q9BZE7 217 aa16.1■□□□□ 0.17
PPFIA4-202ENST00000295706 LRRCC1Q9C099 1032 aa16.1■□□□□ 0.17
PPFIA4-202ENST00000295706 CCDC97Q96F63 343 aaPredicted RBP16.09■□□□□ 0.17
PPFIA4-202ENST00000295706 ERLIN1O75477 346 aa16.09■□□□□ 0.17
PPFIA4-202ENST00000295706 PKD2Q13563 968 aa16.09■□□□□ 0.17
PPFIA4-202ENST00000295706 BRMS1Q9HCU9 246 aa16.09■□□□□ 0.17
PPFIA4-202ENST00000295706 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
PPFIA4-202ENST00000295706 LETM1O95202 739 aaPredicted RBP16.08■□□□□ 0.17
PPFIA4-202ENST00000295706 TNNT1P13805 278 aa16.08■□□□□ 0.17
PPFIA4-202ENST00000295706 SERPINC1P01008 464 aa16.08■□□□□ 0.16
PPFIA4-202ENST00000295706 CEBPZQ03701 1054 aaKnown RBP16.08■□□□□ 0.16
PPFIA4-202ENST00000295706 PPP1R1BQ9UD71 204 aaPredicted RBP16.08■□□□□ 0.16
PPFIA4-202ENST00000295706 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
PPFIA4-202ENST00000295706 EIF3AQ14152 1382 aaKnown RBP16.08■□□□□ 0.16
PPFIA4-202ENST00000295706 KINO60870 393 aaKnown RBP16.08■□□□□ 0.16
PPFIA4-202ENST00000295706 NLRP13Q86W25 1043 aa16.07■□□□□ 0.16
PPFIA4-202ENST00000295706 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
PPFIA4-202ENST00000295706 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
PPFIA4-202ENST00000295706 RALYLQ86SE5 291 aaKnown RBP16.07■□□□□ 0.16
PPFIA4-202ENST00000295706 ZNHIT6Q9NWK9 470 aaKnown RBP16.07■□□□□ 0.16
PPFIA4-202ENST00000295706 RABEP1Q15276 862 aa16.07■□□□□ 0.16
PPFIA4-202ENST00000295706 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
PPFIA4-202ENST00000295706 NGDNQ8NEJ9 315 aaKnown RBP16.06■□□□□ 0.16
PPFIA4-202ENST00000295706 CEP63Q96MT8 703 aa16.06■□□□□ 0.16
PPFIA4-202ENST00000295706 PDCL3Q9H2J4 239 aa16.06■□□□□ 0.16
PPFIA4-202ENST00000295706 CFAP45Q9UL16 551 aa16.06■□□□□ 0.16
PPFIA4-202ENST00000295706 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
PPFIA4-202ENST00000295706 EEA1Q15075 1411 aa16.05■□□□□ 0.16
PPFIA4-202ENST00000295706 MAP2K1Q02750 393 aaPredicted RBP16.05■□□□□ 0.16
PPFIA4-202ENST00000295706 SYTL4Q96C24 671 aaPredicted RBP16.05■□□□□ 0.16
PPFIA4-202ENST00000295706 CDK5RAP3Q96JB5 506 aa16.05■□□□□ 0.16
PPFIA4-202ENST00000295706 LNPKQ9C0E8 428 aa16.05■□□□□ 0.16
PPFIA4-202ENST00000295706 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
PPFIA4-202ENST00000295706 CBX1P83916 185 aa16.04■□□□□ 0.16
PPFIA4-202ENST00000295706 G3BP1Q13283 466 aaKnown RBP eCLIP16.04■□□□□ 0.16
PPFIA4-202ENST00000295706 WASHC4Q2M389 1173 aa16.04■□□□□ 0.16
PPFIA4-202ENST00000295706 PPFIBP1Q86W92 1011 aa16.04■□□□□ 0.16
PPFIA4-202ENST00000295706 EVA1CP58658 441 aa16.03■□□□□ 0.16
PPFIA4-202ENST00000295706 KRT18P05783 430 aaKnown RBP16.03■□□□□ 0.16
PPFIA4-202ENST00000295706 XBP1P17861 261 aa16.03■□□□□ 0.16
PPFIA4-202ENST00000295706 DNAJC2Q99543 621 aaKnown RBP16.03■□□□□ 0.16
PPFIA4-202ENST00000295706 IKQ13123 557 aaPredicted RBP16.03■□□□□ 0.16
PPFIA4-202ENST00000295706 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
PPFIA4-202ENST00000295706 FIBPO43427 364 aa16.03■□□□□ 0.16
PPFIA4-202ENST00000295706 RRP9O43818 475 aaKnown RBP16.02■□□□□ 0.16
PPFIA4-202ENST00000295706 DDX19BQ9UMR2 479 aa16.02■□□□□ 0.16
PPFIA4-202ENST00000295706 EIF4G1Q04637 1599 aaKnown RBP16.02■□□□□ 0.16
PPFIA4-202ENST00000295706 TANGO6Q9C0B7 1094 aa16.02■□□□□ 0.16
PPFIA4-202ENST00000295706 E9PSI1 815 aa16.02■□□□□ 0.15
PPFIA4-202ENST00000295706 SEPT11Q9NVA2 429 aaKnown RBP16.01■□□□□ 0.15
PPFIA4-202ENST00000295706 WWC2Q6AWC2 1192 aa16.01■□□□□ 0.15
PPFIA4-202ENST00000295706 SLC26A8Q96RN1 970 aa16.01■□□□□ 0.15
PPFIA4-202ENST00000295706 CCDC113Q9H0I3 377 aa16.01■□□□□ 0.15
PPFIA4-202ENST00000295706 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
PPFIA4-202ENST00000295706 TMCO3Q6UWJ1 677 aa16.01■□□□□ 0.15
PPFIA4-202ENST00000295706 SHTN1A0MZ66 631 aa16■□□□□ 0.15
PPFIA4-202ENST00000295706 PDCL2Q8N4E4 241 aa16■□□□□ 0.15
PPFIA4-202ENST00000295706 NEUROD6Q96NK8 337 aa16■□□□□ 0.15
PPFIA4-202ENST00000295706 CGNQ9P2M7 1197 aaKnown RBP16■□□□□ 0.15
PPFIA4-202ENST00000295706 MBD3O95983 291 aa15.99■□□□□ 0.15
PPFIA4-202ENST00000295706 RNF187Q5TA31 235 aaPredicted RBP15.99■□□□□ 0.15
PPFIA4-202ENST00000295706 ZHX3Q9H4I2 956 aa15.99■□□□□ 0.15
PPFIA4-202ENST00000295706 PHLDB1Q86UU1 1377 aa15.98■□□□□ 0.15
PPFIA4-202ENST00000295706 TEFQ10587 303 aa15.98■□□□□ 0.15
PPFIA4-202ENST00000295706 CCDC91Q7Z6B0 441 aa15.98■□□□□ 0.15
PPFIA4-202ENST00000295706 DZIP1LQ8IYY4 767 aaKnown RBP15.98■□□□□ 0.15
PPFIA4-202ENST00000295706 TNIKQ9UKE5 1360 aa15.98■□□□□ 0.15
PPFIA4-202ENST00000295706 LUC7LQ9NQ29 371 aaKnown RBP15.98■□□□□ 0.15
PPFIA4-202ENST00000295706 TXLNAP40222 546 aa15.98■□□□□ 0.15
PPFIA4-202ENST00000295706 TTC5Q8N0Z6 440 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms