RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 KANK1Q14678 1352 aa17.1■□□□□ 0.33
KCNIP3-201ENST00000295225 FRAT2O75474 233 aaPredicted RBP17.1■□□□□ 0.33
KCNIP3-201ENST00000295225 MTHFSP49914 203 aa17.1■□□□□ 0.33
KCNIP3-201ENST00000295225 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
KCNIP3-201ENST00000295225 EIF2AK4Q9P2K8 1649 aaKnown RBP17.09■□□□□ 0.33
KCNIP3-201ENST00000295225 ZFYVE16Q7Z3T8 1539 aa17.09■□□□□ 0.33
KCNIP3-201ENST00000295225 UHRF1BP1LA0JNW5 1464 aa17.09■□□□□ 0.33
KCNIP3-201ENST00000295225 FBLN1P23142 703 aa17.09■□□□□ 0.33
KCNIP3-201ENST00000295225 ASXL2Q76L83 1435 aa17.09■□□□□ 0.33
KCNIP3-201ENST00000295225 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.33
KCNIP3-201ENST00000295225 CABP2Q9NPB3 220 aa17.08■□□□□ 0.33
KCNIP3-201ENST00000295225 SLKQ9H2G2 1235 aaPredicted RBP17.08■□□□□ 0.32
KCNIP3-201ENST00000295225 TMEM132AQ24JP5 1023 aa17.07■□□□□ 0.32
KCNIP3-201ENST00000295225 TSR2Q969E8 191 aaKnown RBP17.07■□□□□ 0.32
KCNIP3-201ENST00000295225 CENPJQ9HC77 1338 aaPredicted RBP17.07■□□□□ 0.32
KCNIP3-201ENST00000295225 NOS1P29475 1434 aa17.07■□□□□ 0.32
KCNIP3-201ENST00000295225 ERVK-7P63135 1459 aa17.06■□□□□ 0.32
KCNIP3-201ENST00000295225 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
KCNIP3-201ENST00000295225 RAPGEF3O95398 923 aa17.06■□□□□ 0.32
KCNIP3-201ENST00000295225 E9PSI1 815 aa17.05■□□□□ 0.32
KCNIP3-201ENST00000295225 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
KCNIP3-201ENST00000295225 ATP7AQ04656 1500 aa17.05■□□□□ 0.32
KCNIP3-201ENST00000295225 RNF17Q9BXT8 1623 aaKnown RBP17.05■□□□□ 0.32
KCNIP3-201ENST00000295225 PCDHB15Q9Y5E8 787 aa17.04■□□□□ 0.32
KCNIP3-201ENST00000295225 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
KCNIP3-201ENST00000295225 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
KCNIP3-201ENST00000295225 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
KCNIP3-201ENST00000295225 U2SURPO15042 1029 aaKnown RBP17.03■□□□□ 0.32
KCNIP3-201ENST00000295225 IQGAP1P46940 1657 aa17.03■□□□□ 0.32
KCNIP3-201ENST00000295225 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
KCNIP3-201ENST00000295225 MYOM1P52179 1685 aa17.03■□□□□ 0.32
KCNIP3-201ENST00000295225 DDRGK1Q96HY6 314 aa17.02■□□□□ 0.32
KCNIP3-201ENST00000295225 GGNBP2Q9H3C7 697 aa17.02■□□□□ 0.32
KCNIP3-201ENST00000295225 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.31
KCNIP3-201ENST00000295225 RTEL1-TNFRSF6BF6WH68 1400 aa17.02■□□□□ 0.31
KCNIP3-201ENST00000295225 TRPM2O94759 1503 aa17.02■□□□□ 0.31
KCNIP3-201ENST00000295225 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.01■□□□□ 0.31
KCNIP3-201ENST00000295225 LAMC1P11047 1609 aa17.01■□□□□ 0.31
KCNIP3-201ENST00000295225 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
KCNIP3-201ENST00000295225 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
KCNIP3-201ENST00000295225 PTPRTO14522 1441 aa17■□□□□ 0.31
KCNIP3-201ENST00000295225 PIK3C2GO75747 1445 aa17■□□□□ 0.31
KCNIP3-201ENST00000295225 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
KCNIP3-201ENST00000295225 SYNMO15061 1565 aa16.99■□□□□ 0.31
KCNIP3-201ENST00000295225 USP19O94966 1318 aa16.97■□□□□ 0.31
KCNIP3-201ENST00000295225 ABCA6Q8N139 1617 aa16.97■□□□□ 0.31
KCNIP3-201ENST00000295225 GSE1Q14687 1217 aa16.97■□□□□ 0.31
KCNIP3-201ENST00000295225 SRPK2P78362 688 aaKnown RBP16.96■□□□□ 0.31
KCNIP3-201ENST00000295225 MINK1Q8N4C8 1332 aaPredicted RBP16.95■□□□□ 0.3
KCNIP3-201ENST00000295225 CEP152O94986 1710 aa16.95■□□□□ 0.3
KCNIP3-201ENST00000295225 RUNDC1Q96C34 613 aa16.95■□□□□ 0.3
KCNIP3-201ENST00000295225 INSRP06213 1382 aa16.95■□□□□ 0.3
KCNIP3-201ENST00000295225 KDM5AP29375 1690 aaKnown RBP16.95■□□□□ 0.3
KCNIP3-201ENST00000295225 PDZRN3Q9UPQ7 1066 aa16.95■□□□□ 0.3
KCNIP3-201ENST00000295225 CD109Q6YHK3 1445 aa16.95■□□□□ 0.3
KCNIP3-201ENST00000295225 IPO4Q8TEX9 1081 aaKnown RBP16.94■□□□□ 0.3
KCNIP3-201ENST00000295225 ABCA9Q8IUA7 1624 aa16.94■□□□□ 0.3
KCNIP3-201ENST00000295225 MROH2AA6NES4 1674 aa16.94■□□□□ 0.3
KCNIP3-201ENST00000295225 TET3O43151 1660 aa16.93■□□□□ 0.3
KCNIP3-201ENST00000295225 INO80Q9ULG1 1556 aaPredicted RBP16.93■□□□□ 0.3
KCNIP3-201ENST00000295225 EXOSC9Q06265 439 aaKnown RBP16.92■□□□□ 0.3
KCNIP3-201ENST00000295225 POGKQ9P215 609 aa16.91■□□□□ 0.3
KCNIP3-201ENST00000295225 ZFP91Q96JP5 570 aaPredicted RBP16.91■□□□□ 0.3
KCNIP3-201ENST00000295225 C14orf93Q9H972 538 aaKnown RBP16.91■□□□□ 0.3
KCNIP3-201ENST00000295225 ELL2O00472 640 aaPredicted RBP16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 CHMP4BQ9H444 224 aaKnown RBP16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 MAP3K4Q9Y6R4 1608 aa16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 USP35Q9P2H5 1018 aa16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 CGNL1Q0VF96 1302 aa16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 KIDINS220Q9ULH0 1771 aa16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 FTSJ3Q8IY81 847 aaKnown RBP16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
KCNIP3-201ENST00000295225 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
KCNIP3-201ENST00000295225 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
KCNIP3-201ENST00000295225 MROH1Q8NDA8 1641 aa16.89■□□□□ 0.29
KCNIP3-201ENST00000295225 NPATQ14207 1427 aa16.89■□□□□ 0.29
KCNIP3-201ENST00000295225 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
KCNIP3-201ENST00000295225 ITPRIPQ8IWB1 547 aa16.89■□□□□ 0.29
KCNIP3-201ENST00000295225 ARAP3Q8WWN8 1544 aa16.88■□□□□ 0.29
KCNIP3-201ENST00000295225 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
KCNIP3-201ENST00000295225 IDI1Q13907 227 aa16.88■□□□□ 0.29
KCNIP3-201ENST00000295225 ZNF518AQ6AHZ1 1483 aa16.87■□□□□ 0.29
KCNIP3-201ENST00000295225 PPRC1Q5VV67 1664 aaKnown RBP16.87■□□□□ 0.29
KCNIP3-201ENST00000295225 GZF1Q9H116 711 aaPredicted RBP16.87■□□□□ 0.29
KCNIP3-201ENST00000295225 POLR3AO14802 1390 aaPredicted RBP16.87■□□□□ 0.29
KCNIP3-201ENST00000295225 NPC1L1Q9UHC9 1359 aa16.87■□□□□ 0.29
KCNIP3-201ENST00000295225 FBXO31Q5XUX0 539 aaPredicted RBP16.86■□□□□ 0.29
KCNIP3-201ENST00000295225 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
KCNIP3-201ENST00000295225 TEX2Q8IWB9 1127 aa16.86■□□□□ 0.29
KCNIP3-201ENST00000295225 BBXQ8WY36 941 aaPredicted RBP16.86■□□□□ 0.29
KCNIP3-201ENST00000295225 SSH1Q8WYL5 1049 aa16.85■□□□□ 0.29
KCNIP3-201ENST00000295225 STAC3Q96MF2 364 aa16.85■□□□□ 0.29
KCNIP3-201ENST00000295225 HMOX1P09601 288 aa16.85■□□□□ 0.29
KCNIP3-201ENST00000295225 C1orf115Q9H7X2 142 aa16.85■□□□□ 0.29
KCNIP3-201ENST00000295225 KIF1BO60333 1816 aa16.85■□□□□ 0.29
KCNIP3-201ENST00000295225 PRAM1Q96QH2 718 aa16.84■□□□□ 0.29
KCNIP3-201ENST00000295225 VWDEQ8N2E2 1590 aa16.84■□□□□ 0.29
KCNIP3-201ENST00000295225 EFCAB6Q5THR3 1501 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms