RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 TRERF1Q96PN7 1200 aa17.29■□□□□ 0.36
PTPRO-201ENST00000281171 IPO4Q8TEX9 1081 aaKnown RBP17.28■□□□□ 0.36
PTPRO-201ENST00000281171 FAM107BQ9H098 131 aa17.28■□□□□ 0.36
PTPRO-201ENST00000281171 LRRFIP1Q32MZ4 808 aaKnown RBP17.27■□□□□ 0.36
PTPRO-201ENST00000281171 SF3A1Q15459 793 aaKnown RBP17.27■□□□□ 0.36
PTPRO-201ENST00000281171 CCDC94Q9BW85 323 aaPredicted RBP17.27■□□□□ 0.36
PTPRO-201ENST00000281171 GORABQ5T7V8 394 aa17.26■□□□□ 0.35
PTPRO-201ENST00000281171 CLUAP1Q96AJ1 413 aa17.26■□□□□ 0.35
PTPRO-201ENST00000281171 ROCK1Q13464 1354 aa17.26■□□□□ 0.35
PTPRO-201ENST00000281171 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
PTPRO-201ENST00000281171 ST20-MTHFSA0A0A6YYL1 179 aa17.25■□□□□ 0.35
PTPRO-201ENST00000281171 TNNT1P13805 278 aa17.25■□□□□ 0.35
PTPRO-201ENST00000281171 CFTRP13569 1480 aa17.25■□□□□ 0.35
PTPRO-201ENST00000281171 LRRC9Q6ZRR7 1453 aa17.25■□□□□ 0.35
PTPRO-201ENST00000281171 PRIMPOLQ96LW4 560 aa17.25■□□□□ 0.35
PTPRO-201ENST00000281171 TRIM5Q9C035 493 aa17.25■□□□□ 0.35
PTPRO-201ENST00000281171 REC8O95072 547 aa17.24■□□□□ 0.35
PTPRO-201ENST00000281171 ERLIN1O75477 346 aa17.24■□□□□ 0.35
PTPRO-201ENST00000281171 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
PTPRO-201ENST00000281171 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
PTPRO-201ENST00000281171 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
PTPRO-201ENST00000281171 DDX11Q96FC9 970 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 PANK3Q9H999 370 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 INCENPQ9NQS7 918 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 PES1O00541 588 aaKnown RBP17.23■□□□□ 0.35
PTPRO-201ENST00000281171 IPO7O95373 1038 aaKnown RBP17.23■□□□□ 0.35
PTPRO-201ENST00000281171 TDO2P48775 406 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 SYNJ2O15056 1496 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 IFT140Q96RY7 1462 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
PTPRO-201ENST00000281171 SCAPERQ9BY12 1400 aa17.22■□□□□ 0.35
PTPRO-201ENST00000281171 GOLGA6L7A0A1B0GV03 622 aa17.22■□□□□ 0.35
PTPRO-201ENST00000281171 RUSC2Q8N2Y8 1516 aa17.22■□□□□ 0.35
PTPRO-201ENST00000281171 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
PTPRO-201ENST00000281171 RRBP1Q9P2E9 1410 aaKnown RBP17.21■□□□□ 0.35
PTPRO-201ENST00000281171 GTF2F1P35269 517 aaKnown RBP eCLIP17.21■□□□□ 0.35
PTPRO-201ENST00000281171 HFM1A2PYH4 1435 aa17.21■□□□□ 0.35
PTPRO-201ENST00000281171 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
PTPRO-201ENST00000281171 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
PTPRO-201ENST00000281171 TMCO3Q6UWJ1 677 aa17.21■□□□□ 0.35
PTPRO-201ENST00000281171 NOL10Q9BSC4 688 aaKnown RBP17.21■□□□□ 0.34
PTPRO-201ENST00000281171 H3BQV1 296 aa17.2■□□□□ 0.34
PTPRO-201ENST00000281171 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
PTPRO-201ENST00000281171 TULP1O00294 542 aaPredicted RBP17.2■□□□□ 0.34
PTPRO-201ENST00000281171 BRD2P25440 801 aaKnown RBP17.2■□□□□ 0.34
PTPRO-201ENST00000281171 SPDYE4A6NLX3 237 aa17.2■□□□□ 0.34
PTPRO-201ENST00000281171 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
PTPRO-201ENST00000281171 RBM25P49756 843 aaKnown RBP17.2■□□□□ 0.34
PTPRO-201ENST00000281171 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
PTPRO-201ENST00000281171 FAM184AQ8NB25 1140 aa17.2■□□□□ 0.34
PTPRO-201ENST00000281171 ANKRD50Q9ULJ7 1429 aa17.19■□□□□ 0.34
PTPRO-201ENST00000281171 CT47A1Q5JQC4 288 aaPredicted RBP17.19■□□□□ 0.34
PTPRO-201ENST00000281171 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
PTPRO-201ENST00000281171 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
PTPRO-201ENST00000281171 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
PTPRO-201ENST00000281171 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
PTPRO-201ENST00000281171 COG6Q9Y2V7 657 aa17.18■□□□□ 0.34
PTPRO-201ENST00000281171 TXLNBQ8N3L3 684 aa17.18■□□□□ 0.34
PTPRO-201ENST00000281171 NAT10Q9H0A0 1025 aaKnown RBP17.18■□□□□ 0.34
PTPRO-201ENST00000281171 ZRSR2Q15696 482 aaKnown RBP17.18■□□□□ 0.34
PTPRO-201ENST00000281171 SKIDA1Q1XH10 827 aa17.18■□□□□ 0.34
PTPRO-201ENST00000281171 ANKRD45Q5TZF3 282 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 EHBP1L1Q8N3D4 1523 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 CREBRFQ8IUR6 639 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 TTLL5Q6EMB2 1281 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 NCOA2Q15596 1464 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 CENPHQ9H3R5 247 aa17.17■□□□□ 0.34
PTPRO-201ENST00000281171 KRT222Q8N1A0 295 aa17.16■□□□□ 0.34
PTPRO-201ENST00000281171 KIF2AO00139 706 aaPredicted RBP17.16■□□□□ 0.34
PTPRO-201ENST00000281171 DNAAF4Q8WXU2 420 aa17.16■□□□□ 0.34
PTPRO-201ENST00000281171 TRIM34Q9BYJ4 488 aa17.16■□□□□ 0.34
PTPRO-201ENST00000281171 CNTLNQ9NXG0 1405 aa17.16■□□□□ 0.34
PTPRO-201ENST00000281171 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
PTPRO-201ENST00000281171 VGLL3A8MV65 326 aa17.15■□□□□ 0.34
PTPRO-201ENST00000281171 RBM28Q9NW13 759 aaKnown RBP17.15■□□□□ 0.34
PTPRO-201ENST00000281171 DIAPH1O60610 1272 aaKnown RBP17.15■□□□□ 0.34
PTPRO-201ENST00000281171 UBXN4Q92575 508 aa17.15■□□□□ 0.34
PTPRO-201ENST00000281171 MNAT1P51948 309 aa17.15■□□□□ 0.34
PTPRO-201ENST00000281171 CHMP3Q9Y3E7 222 aa17.15■□□□□ 0.34
PTPRO-201ENST00000281171 NEXNQ0ZGT2 675 aa17.14■□□□□ 0.33
PTPRO-201ENST00000281171 CCDC91Q7Z6B0 441 aa17.14■□□□□ 0.33
PTPRO-201ENST00000281171 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
PTPRO-201ENST00000281171 CWC22Q9HCG8 908 aaKnown RBP17.13■□□□□ 0.33
PTPRO-201ENST00000281171 TEFQ10587 303 aa17.13■□□□□ 0.33
PTPRO-201ENST00000281171 SHTN1A0MZ66 631 aa17.13■□□□□ 0.33
PTPRO-201ENST00000281171 DDX58O95786 925 aaKnown RBP17.12■□□□□ 0.33
PTPRO-201ENST00000281171 PAIP2Q9BPZ3 127 aaKnown RBP17.12■□□□□ 0.33
PTPRO-201ENST00000281171 OFD1O75665 1012 aa17.12■□□□□ 0.33
PTPRO-201ENST00000281171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPRO-201ENST00000281171 BMS1Q14692 1282 aaKnown RBP17.12■□□□□ 0.33
PTPRO-201ENST00000281171 FILIP1Q7Z7B0 1213 aa17.12■□□□□ 0.33
PTPRO-201ENST00000281171 HOMEZQ8IX15 550 aa17.12■□□□□ 0.33
PTPRO-201ENST00000281171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.12■□□□□ 0.33
PTPRO-201ENST00000281171 HSP90AB4PQ58FF6 505 aa17.11■□□□□ 0.33
PTPRO-201ENST00000281171 ANKRD20A12PQ8NF67 263 aa17.11■□□□□ 0.33
PTPRO-201ENST00000281171 RUNDC1Q96C34 613 aa17.11■□□□□ 0.33
PTPRO-201ENST00000281171 SMC3Q9UQE7 1217 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 341.1 ms