RNA–Protein interactions for RNA: ENST00000268220.11

SEC11A-201, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11A, Length 1,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-201ENST00000268220 NRXN1Q9ULB1 1477 aa28.83■■■□□ 2.21
SEC11A-201ENST00000268220 DCAF11Q8TEB1 546 aa28.82■■■□□ 2.2
SEC11A-201ENST00000268220 KDM2AQ9Y2K7 1162 aa28.82■■■□□ 2.2
SEC11A-201ENST00000268220 COL16A1Q07092 1604 aaPredicted RBP28.82■■■□□ 2.2
SEC11A-201ENST00000268220 ASXL1Q8IXJ9 1541 aa28.82■■■□□ 2.2
SEC11A-201ENST00000268220 WAPLQ7Z5K2 1190 aa28.81■■■□□ 2.2
SEC11A-201ENST00000268220 TECPR2O15040 1411 aa28.81■■■□□ 2.2
SEC11A-201ENST00000268220 STAC3Q96MF2 364 aa28.8■■■□□ 2.2
SEC11A-201ENST00000268220 YTHDC2Q9H6S0 1430 aaKnown RBP28.8■■■□□ 2.2
SEC11A-201ENST00000268220 EIF4G2P78344 907 aaKnown RBP eCLIP28.79■■■□□ 2.2
SEC11A-201ENST00000268220 C1orf167Q5SNV9 1468 aa28.79■■■□□ 2.2
SEC11A-201ENST00000268220 SOCS7O14512 581 aa28.78■■■□□ 2.2
SEC11A-201ENST00000268220 TRPM1Q7Z4N2 1603 aa28.78■■■□□ 2.2
SEC11A-201ENST00000268220 HSPA5P11021 654 aaKnown RBP28.77■■■□□ 2.2
SEC11A-201ENST00000268220 LAMC1P11047 1609 aa28.76■■■□□ 2.2
SEC11A-201ENST00000268220 SIRT1Q96EB6 747 aa28.76■■■□□ 2.19
SEC11A-201ENST00000268220 SPATA31A6Q5VVP1 1343 aa28.75■■■□□ 2.19
SEC11A-201ENST00000268220 LRRC59Q96AG4 307 aaKnown RBP28.74■■■□□ 2.19
SEC11A-201ENST00000268220 ORAI2Q96SN7 254 aa28.74■■■□□ 2.19
SEC11A-201ENST00000268220 HIRIP3Q9BW71 556 aaPredicted RBP28.74■■■□□ 2.19
SEC11A-201ENST00000268220 KNDC1Q76NI1 1749 aa28.72■■■□□ 2.19
SEC11A-201ENST00000268220 DDX17Q92841 729 aaKnown RBP28.72■■■□□ 2.19
SEC11A-201ENST00000268220 PLEKHH1Q9ULM0 1364 aa28.71■■■□□ 2.19
SEC11A-201ENST00000268220 CDC42BPGQ6DT37 1551 aa28.7■■■□□ 2.19
SEC11A-201ENST00000268220 NHSL1Q5SYE7 1610 aa28.69■■■□□ 2.18
SEC11A-201ENST00000268220 ESCO1Q5FWF5 840 aa28.69■■■□□ 2.18
SEC11A-201ENST00000268220 RGS17Q9UGC6 210 aaPredicted RBP28.69■■■□□ 2.18
SEC11A-201ENST00000268220 MEX3CQ5U5Q3 659 aaKnown RBP28.67■■■□□ 2.18
SEC11A-201ENST00000268220 PRAM1Q96QH2 718 aa28.67■■■□□ 2.18
SEC11A-201ENST00000268220 POGKQ9P215 609 aa28.67■■■□□ 2.18
SEC11A-201ENST00000268220 SHPRHQ149N8 1683 aa28.66■■■□□ 2.18
SEC11A-201ENST00000268220 NUTM2FA1L443 756 aa28.65■■■□□ 2.18
SEC11A-201ENST00000268220 MIER1Q8N108 512 aa28.65■■■□□ 2.18
SEC11A-201ENST00000268220 NUTM2BA6NNL0 878 aaPredicted RBP28.64■■■□□ 2.17
SEC11A-201ENST00000268220 NUTM2EB1AL46 878 aaPredicted RBP28.64■■■□□ 2.17
SEC11A-201ENST00000268220 SAFB2Q14151 953 aaKnown RBP eCLIP28.64■■■□□ 2.17
SEC11A-201ENST00000268220 NUTM2AQ8IVF1 878 aaPredicted RBP28.64■■■□□ 2.17
SEC11A-201ENST00000268220 USP47Q96K76 1375 aa28.63■■■□□ 2.17
SEC11A-201ENST00000268220 TRAK1Q9UPV9 953 aa28.63■■■□□ 2.17
SEC11A-201ENST00000268220 GPRASP1Q5JY77 1395 aa28.61■■■□□ 2.17
SEC11A-201ENST00000268220 SOS2Q07890 1332 aaPredicted RBP28.61■■■□□ 2.17
SEC11A-201ENST00000268220 ADGRB1O14514 1584 aa28.6■■■□□ 2.17
SEC11A-201ENST00000268220 NPHP3Q7Z494 1330 aa28.6■■■□□ 2.17
SEC11A-201ENST00000268220 LRP6O75581 1613 aa28.6■■■□□ 2.17
SEC11A-201ENST00000268220 DLC1Q96QB1 1528 aa28.59■■■□□ 2.17
SEC11A-201ENST00000268220 DDX10Q13206 875 aaKnown RBP28.58■■■□□ 2.17
SEC11A-201ENST00000268220 KIAA1210Q9ULL0 1709 aa28.58■■■□□ 2.17
SEC11A-201ENST00000268220 FOXO3O43524 673 aa28.58■■■□□ 2.16
SEC11A-201ENST00000268220 ROCK2O75116 1388 aaKnown RBP28.57■■■□□ 2.16
SEC11A-201ENST00000268220 PNPLA6Q8IY17 1366 aa28.57■■■□□ 2.16
SEC11A-201ENST00000268220 POTEAQ6S8J7 498 aa28.57■■■□□ 2.16
SEC11A-201ENST00000268220 CARD11Q9BXL7 1154 aa28.56■■■□□ 2.16
SEC11A-201ENST00000268220 WASHC2AQ641Q2 1341 aa28.55■■■□□ 2.16
SEC11A-201ENST00000268220 FMN2Q9NZ56 1722 aa28.54■■■□□ 2.16
SEC11A-201ENST00000268220 CCDC7Q96M83 1385 aa28.52■■■□□ 2.16
SEC11A-201ENST00000268220 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
SEC11A-201ENST00000268220 XPCQ01831 940 aaPredicted RBP28.51■■■□□ 2.15
SEC11A-201ENST00000268220 MINK1Q8N4C8 1332 aaPredicted RBP28.49■■■□□ 2.15
SEC11A-201ENST00000268220 PHF8Q9UPP1 1060 aa28.48■■■□□ 2.15
SEC11A-201ENST00000268220 C11orf95C9JLR9 678 aaPredicted RBP28.47■■■□□ 2.15
SEC11A-201ENST00000268220 PXDNQ92626 1479 aa28.46■■■□□ 2.15
SEC11A-201ENST00000268220 C8orf37Q96NL8 207 aa28.45■■■□□ 2.15
SEC11A-201ENST00000268220 ADAMTS2O95450 1211 aa28.45■■■□□ 2.14
SEC11A-201ENST00000268220 NBPF1Q3BBV0 1214 aa28.45■■■□□ 2.14
SEC11A-201ENST00000268220 KIF1AQ12756 1690 aa28.44■■■□□ 2.14
SEC11A-201ENST00000268220 KRT28Q7Z3Y7 464 aa28.44■■■□□ 2.14
SEC11A-201ENST00000268220 EIF3AQ14152 1382 aaKnown RBP28.44■■■□□ 2.14
SEC11A-201ENST00000268220 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
SEC11A-201ENST00000268220 AFF2P51816 1311 aa28.43■■■□□ 2.14
SEC11A-201ENST00000268220 KIF7Q2M1P5 1343 aa28.43■■■□□ 2.14
SEC11A-201ENST00000268220 ADGRB2O60241 1585 aa28.43■■■□□ 2.14
SEC11A-201ENST00000268220 WASLO00401 505 aaPredicted RBP28.42■■■□□ 2.14
SEC11A-201ENST00000268220 PSME1Q06323 249 aa28.42■■■□□ 2.14
SEC11A-201ENST00000268220 NGLY1Q96IV0 654 aa28.42■■■□□ 2.14
SEC11A-201ENST00000268220 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.14
SEC11A-201ENST00000268220 PMFBP1Q8TBY8 1022 aa28.38■■■□□ 2.13
SEC11A-201ENST00000268220 SPATA31A3Q5VYP0 1347 aa28.38■■■□□ 2.13
SEC11A-201ENST00000268220 ST20-MTHFSA0A0A6YYL1 179 aa28.37■■■□□ 2.13
SEC11A-201ENST00000268220 ARHGEF28Q8N1W1 1705 aaKnown RBP28.37■■■□□ 2.13
SEC11A-201ENST00000268220 COL22A1Q8NFW1 1626 aaPredicted RBP28.36■■■□□ 2.13
SEC11A-201ENST00000268220 RXRBP28702 533 aa28.35■■■□□ 2.13
SEC11A-201ENST00000268220 TULP4Q9NRJ4 1543 aa28.34■■■□□ 2.13
SEC11A-201ENST00000268220 USP32Q8NFA0 1604 aa28.33■■■□□ 2.13
SEC11A-201ENST00000268220 PRR36Q9H6K5 1346 aa28.32■■■□□ 2.12
SEC11A-201ENST00000268220 LMOD2Q6P5Q4 547 aa28.32■■■□□ 2.12
SEC11A-201ENST00000268220 QTRT2Q9H974 415 aaKnown RBP28.32■■■□□ 2.12
SEC11A-201ENST00000268220 CDK19Q9BWU1 502 aa28.31■■■□□ 2.12
SEC11A-201ENST00000268220 SBNO1A3KN83 1393 aa28.3■■■□□ 2.12
SEC11A-201ENST00000268220 NGDNQ8NEJ9 315 aaKnown RBP28.29■■■□□ 2.12
SEC11A-201ENST00000268220 NUDT16Q96DE0 195 aaKnown RBP28.29■■■□□ 2.12
SEC11A-201ENST00000268220 TNS3Q68CZ2 1445 aa28.29■■■□□ 2.12
SEC11A-201ENST00000268220 ANP32CO43423 234 aa28.29■■■□□ 2.12
SEC11A-201ENST00000268220 HAP1P54257 671 aaPredicted RBP28.29■■■□□ 2.12
SEC11A-201ENST00000268220 USP21Q9UK80 565 aa28.29■■■□□ 2.12
SEC11A-201ENST00000268220 CENPJQ9HC77 1338 aaPredicted RBP28.28■■■□□ 2.12
SEC11A-201ENST00000268220 FNBP4Q8N3X1 1017 aaPredicted RBP28.26■■■□□ 2.12
SEC11A-201ENST00000268220 ARHGEF10O15013 1369 aa28.26■■■□□ 2.11
SEC11A-201ENST00000268220 RBM6P78332 1123 aaKnown RBP28.25■■■□□ 2.11
SEC11A-201ENST00000268220 TESK2Q96S53 571 aa28.24■■■□□ 2.11
SEC11A-201ENST00000268220 PLEKHG5O94827 1062 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms