RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 HMOX1P09601 288 aa5.97□□□□□ -1.45
USP44-201ENST00000258499 RLBP1P12271 317 aa5.97□□□□□ -1.45
USP44-201ENST00000258499 GPRASP1Q5JY77 1395 aa5.97□□□□□ -1.45
USP44-201ENST00000258499 NUTM2FA1L443 756 aa5.96□□□□□ -1.45
USP44-201ENST00000258499 DDX19BQ9UMR2 479 aa5.96□□□□□ -1.45
USP44-201ENST00000258499 CEP170Q5SW79 1584 aa5.96□□□□□ -1.45
USP44-201ENST00000258499 ABCC10Q5T3U5 1492 aa5.96□□□□□ -1.45
USP44-201ENST00000258499 NUP160Q12769 1436 aa5.96□□□□□ -1.45
USP44-201ENST00000258499 GOLGA6L22H0YM25 854 aa5.96□□□□□ -1.46
USP44-201ENST00000258499 C1orf115Q9H7X2 142 aa5.96□□□□□ -1.46
USP44-201ENST00000258499 DIAPH1O60610 1272 aaKnown RBP5.96□□□□□ -1.46
USP44-201ENST00000258499 PNNQ9H307 717 aaKnown RBP5.96□□□□□ -1.46
USP44-201ENST00000258499 NOB1Q9ULX3 412 aaKnown RBP5.96□□□□□ -1.46
USP44-201ENST00000258499 PLA2R1Q13018 1463 aa5.96□□□□□ -1.46
USP44-201ENST00000258499 MAGI2Q86UL8 1455 aa5.96□□□□□ -1.46
USP44-201ENST00000258499 BLMP54132 1417 aaPredicted RBP5.96□□□□□ -1.46
USP44-201ENST00000258499 MVPQ14764 893 aaKnown RBP5.96□□□□□ -1.46
USP44-201ENST00000258499 WDR63Q8IWG1 891 aa5.95□□□□□ -1.46
USP44-201ENST00000258499 SSH1Q8WYL5 1049 aa5.95□□□□□ -1.46
USP44-201ENST00000258499 RAPGEF3O95398 923 aa5.95□□□□□ -1.46
USP44-201ENST00000258499 FBLN1P23142 703 aa5.95□□□□□ -1.46
USP44-201ENST00000258499 THUMPD2Q9BTF0 503 aaKnown RBP5.95□□□□□ -1.46
USP44-201ENST00000258499 TBC1D2Q9BYX2 928 aa5.95□□□□□ -1.46
USP44-201ENST00000258499 ASXL1Q8IXJ9 1541 aa5.95□□□□□ -1.46
USP44-201ENST00000258499 PRAM1Q96QH2 718 aa5.94□□□□□ -1.46
USP44-201ENST00000258499 CHMP5Q9NZZ3 219 aa5.94□□□□□ -1.46
USP44-201ENST00000258499 ATF7IPQ6VMQ6 1270 aa5.94□□□□□ -1.46
USP44-201ENST00000258499 TMEM57Q8N5G2 664 aa5.94□□□□□ -1.46
USP44-201ENST00000258499 ZMYM4Q5VZL5 1548 aa5.94□□□□□ -1.46
USP44-201ENST00000258499 PRKAR2BP31323 418 aa5.94□□□□□ -1.46
USP44-201ENST00000258499 TMPOP42166 694 aaKnown RBP5.94□□□□□ -1.46
USP44-201ENST00000258499 NOS1P29475 1434 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 TRIM27P14373 513 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 GBP4Q96PP9 640 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 PLCH2O75038 1416 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 ZNF521Q96K83 1311 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 ADGBQ8N7X0 1667 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 FOXD4L5Q5VV16 416 aaPredicted RBP5.93□□□□□ -1.46
USP44-201ENST00000258499 FOXD4L4Q8WXT5 416 aaPredicted RBP5.93□□□□□ -1.46
USP44-201ENST00000258499 TRAK2O60296 914 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 CHMP4BQ9H444 224 aaKnown RBP5.93□□□□□ -1.46
USP44-201ENST00000258499 CABP1Q9NZU7 370 aa5.93□□□□□ -1.46
USP44-201ENST00000258499 DUOX2Q9NRD8 1548 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 ZBTB7CA1YPR0 619 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 PIK3C2GO75747 1445 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 SLC4A10Q6U841 1118 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 C14orf37Q86TY3 774 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 KIF16BQ96L93 1317 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 KDM5DQ9BY66 1539 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 CASC1Q6TDU7 716 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 MCM4P33991 863 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 AAMPQ13685 434 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 NOL8Q76FK4 1167 aaKnown RBP5.92□□□□□ -1.46
USP44-201ENST00000258499 TBC1D32Q96NH3 1257 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 WDR7Q9Y4E6 1490 aa5.92□□□□□ -1.46
USP44-201ENST00000258499 NINLQ9Y2I6 1382 aa5.91□□□□□ -1.46
USP44-201ENST00000258499 DDX11L8A8MPP1 907 aa5.91□□□□□ -1.46
USP44-201ENST00000258499 CALD1Q05682 793 aaKnown RBP5.91□□□□□ -1.46
USP44-201ENST00000258499 SAMD9LQ8IVG5 1584 aa5.91□□□□□ -1.46
USP44-201ENST00000258499 C14orf93Q9H972 538 aaKnown RBP5.91□□□□□ -1.46
USP44-201ENST00000258499 ABCA8O94911 1581 aa5.91□□□□□ -1.46
USP44-201ENST00000258499 DDX49Q9Y6V7 483 aaKnown RBP5.9□□□□□ -1.46
USP44-201ENST00000258499 IDI1Q13907 227 aa5.9□□□□□ -1.46
USP44-201ENST00000258499 FOXD4L6Q3SYB3 417 aaPredicted RBP5.9□□□□□ -1.46
USP44-201ENST00000258499 FOXD4L3Q6VB84 417 aaPredicted RBP5.9□□□□□ -1.46
USP44-201ENST00000258499 TRMT2AQ8IZ69 625 aaKnown RBP5.9□□□□□ -1.46
USP44-201ENST00000258499 FANCAO15360 1455 aa5.9□□□□□ -1.46
USP44-201ENST00000258499 ADGRL1O94910 1474 aa5.9□□□□□ -1.46
USP44-201ENST00000258499 CHD1LQ86WJ1 897 aa5.9□□□□□ -1.47
USP44-201ENST00000258499 CDK19Q9BWU1 502 aa5.9□□□□□ -1.47
USP44-201ENST00000258499 POLR3AO14802 1390 aaPredicted RBP5.9□□□□□ -1.47
USP44-201ENST00000258499 RSPH6AQ9H0K4 717 aa5.9□□□□□ -1.47
USP44-201ENST00000258499 DCTN1Q14203 1278 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 WAPLQ7Z5K2 1190 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 PANK2Q9BZ23 570 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 EIF2AK4Q9P2K8 1649 aaKnown RBP5.89□□□□□ -1.47
USP44-201ENST00000258499 INSRP06213 1382 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 RRS1Q15050 365 aaKnown RBP5.89□□□□□ -1.47
USP44-201ENST00000258499 FAM43AQ8N2R8 423 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 NECTIN2Q92692 538 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 COG3Q96JB2 828 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 CDC42BPAQ5VT25 1732 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 ARHGEF5Q12774 1597 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.89□□□□□ -1.47
USP44-201ENST00000258499 PTMAP06454 111 aaKnown RBP5.89□□□□□ -1.47
USP44-201ENST00000258499 TWISTNBQ3B726 338 aaPredicted RBP5.89□□□□□ -1.47
USP44-201ENST00000258499 GLIPR1L2Q4G1C9 344 aa5.89□□□□□ -1.47
USP44-201ENST00000258499 GNAI1P63096 354 aa5.88□□□□□ -1.47
USP44-201ENST00000258499 RTF1Q92541 710 aaKnown RBP5.88□□□□□ -1.47
USP44-201ENST00000258499 NPC1L1Q9UHC9 1359 aa5.88□□□□□ -1.47
USP44-201ENST00000258499 PRDM15P57071 1507 aaPredicted RBP5.88□□□□□ -1.47
USP44-201ENST00000258499 FYB1O15117 783 aa5.88□□□□□ -1.47
USP44-201ENST00000258499 PLCB2Q00722 1185 aa5.88□□□□□ -1.47
USP44-201ENST00000258499 EMILIN1Q9Y6C2 1016 aa5.88□□□□□ -1.47
USP44-201ENST00000258499 TRIM6-TRIM34B2RNG4 842 aa5.88□□□□□ -1.47
USP44-201ENST00000258499 CT47B1P0C2W7 299 aaPredicted RBP5.88□□□□□ -1.47
USP44-201ENST00000258499 MSNP26038 577 aaKnown RBP5.88□□□□□ -1.47
USP44-201ENST00000258499 LMOD3Q0VAK6 560 aa5.88□□□□□ -1.47
USP44-201ENST00000258499 FBXO31Q5XUX0 539 aaPredicted RBP5.88□□□□□ -1.47
USP44-201ENST00000258499 ARID3AQ99856 593 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms