RNA–Protein interactions for RNA: ENST00000254998.2

NXT1-201, Transcript of nuclear transport factor 2 like export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXT1, Length 1,123 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXT1-201ENST00000254998 HSPA1LP34931 641 aa31.04■■■□□ 2.56
NXT1-201ENST00000254998 PRAM1Q96QH2 718 aa31.01■■■□□ 2.55
NXT1-201ENST00000254998 TRAK1Q9UPV9 953 aa31.01■■■□□ 2.55
NXT1-201ENST00000254998 NBPF1Q3BBV0 1214 aa31■■■□□ 2.55
NXT1-201ENST00000254998 TRPM1Q7Z4N2 1603 aa30.98■■■□□ 2.55
NXT1-201ENST00000254998 POGKQ9P215 609 aa30.97■■■□□ 2.55
NXT1-201ENST00000254998 C1orf167Q5SNV9 1468 aa30.96■■■□□ 2.55
NXT1-201ENST00000254998 ARHGEF28Q8N1W1 1705 aaKnown RBP30.95■■■□□ 2.55
NXT1-201ENST00000254998 BRINP3Q76B58 766 aa30.95■■■□□ 2.55
NXT1-201ENST00000254998 NBPF8Q3BBV2 869 aa30.93■■■□□ 2.54
NXT1-201ENST00000254998 ADGRB2O60241 1585 aa30.92■■■□□ 2.54
NXT1-201ENST00000254998 AHDC1Q5TGY3 1603 aaPredicted RBP30.91■■■□□ 2.54
NXT1-201ENST00000254998 SAFB2Q14151 953 aaKnown RBP eCLIP30.9■■■□□ 2.54
NXT1-201ENST00000254998 TIMELESSQ9UNS1 1208 aa30.89■■■□□ 2.54
NXT1-201ENST00000254998 FMN2Q9NZ56 1722 aa30.89■■■□□ 2.54
NXT1-201ENST00000254998 GPRASP1Q5JY77 1395 aa30.89■■■□□ 2.54
NXT1-201ENST00000254998 CCER1Q8TC90 406 aaPredicted RBP30.88■■■□□ 2.53
NXT1-201ENST00000254998 ROCK2O75116 1388 aaKnown RBP30.88■■■□□ 2.53
NXT1-201ENST00000254998 PHLPP1O60346 1717 aa30.86■■■□□ 2.53
NXT1-201ENST00000254998 RALGAPBQ86X10 1494 aa30.85■■■□□ 2.53
NXT1-201ENST00000254998 COL16A1Q07092 1604 aaPredicted RBP30.83■■■□□ 2.53
NXT1-201ENST00000254998 NHSL1Q5SYE7 1610 aa30.83■■■□□ 2.53
NXT1-201ENST00000254998 MINK1Q8N4C8 1332 aaPredicted RBP30.82■■■□□ 2.52
NXT1-201ENST00000254998 ORAI2Q96SN7 254 aa30.82■■■□□ 2.52
NXT1-201ENST00000254998 ANKARQ7Z5J8 1434 aa30.8■■■□□ 2.52
NXT1-201ENST00000254998 EIF3AQ14152 1382 aaKnown RBP30.79■■■□□ 2.52
NXT1-201ENST00000254998 CENPJQ9HC77 1338 aaPredicted RBP30.78■■■□□ 2.52
NXT1-201ENST00000254998 HIRIP3Q9BW71 556 aaPredicted RBP30.78■■■□□ 2.52
NXT1-201ENST00000254998 WASLO00401 505 aaPredicted RBP30.77■■■□□ 2.52
NXT1-201ENST00000254998 ESCO1Q5FWF5 840 aa30.77■■■□□ 2.52
NXT1-201ENST00000254998 NUTM2FA1L443 756 aa30.76■■■□□ 2.51
NXT1-201ENST00000254998 TULP4Q9NRJ4 1543 aa30.74■■■□□ 2.51
NXT1-201ENST00000254998 CARD11Q9BXL7 1154 aa30.73■■■□□ 2.51
NXT1-201ENST00000254998 USP32Q8NFA0 1604 aa30.73■■■□□ 2.51
NXT1-201ENST00000254998 KIF1AQ12756 1690 aa30.72■■■□□ 2.51
NXT1-201ENST00000254998 JCADQ9P266 1359 aa30.72■■■□□ 2.51
NXT1-201ENST00000254998 QRICH2Q9H0J4 1663 aa30.71■■■□□ 2.51
NXT1-201ENST00000254998 RGPD8O14715 1765 aaPredicted RBP30.7■■■□□ 2.51
NXT1-201ENST00000254998 DDX17Q92841 729 aaKnown RBP30.7■■■□□ 2.51
NXT1-201ENST00000254998 SOS2Q07890 1332 aaPredicted RBP30.7■■■□□ 2.5
NXT1-201ENST00000254998 NPHP3Q7Z494 1330 aa30.7■■■□□ 2.5
NXT1-201ENST00000254998 PRR36Q9H6K5 1346 aa30.68■■■□□ 2.5
NXT1-201ENST00000254998 LRRC59Q96AG4 307 aaKnown RBP30.67■■■□□ 2.5
NXT1-201ENST00000254998 PHF8Q9UPP1 1060 aa30.67■■■□□ 2.5
NXT1-201ENST00000254998 CDK19Q9BWU1 502 aa30.66■■■□□ 2.5
NXT1-201ENST00000254998 SHPRHQ149N8 1683 aa30.65■■■□□ 2.5
NXT1-201ENST00000254998 ATP7BP35670 1465 aa30.65■■■□□ 2.5
NXT1-201ENST00000254998 PXDNQ92626 1479 aa30.65■■■□□ 2.5
NXT1-201ENST00000254998 FOXO3O43524 673 aa30.65■■■□□ 2.5
NXT1-201ENST00000254998 MED1Q15648 1581 aaPredicted RBP30.64■■■□□ 2.5
NXT1-201ENST00000254998 SBNO2Q9Y2G9 1366 aa30.64■■■□□ 2.5
NXT1-201ENST00000254998 NUDT16Q96DE0 195 aaKnown RBP30.62■■■□□ 2.49
NXT1-201ENST00000254998 ITSN1Q15811 1721 aa30.6■■■□□ 2.49
NXT1-201ENST00000254998 SPATA31A6Q5VVP1 1343 aa30.6■■■□□ 2.49
NXT1-201ENST00000254998 PNPLA6Q8IY17 1366 aa30.57■■■□□ 2.48
NXT1-201ENST00000254998 EVC2Q86UK5 1308 aa30.57■■■□□ 2.48
NXT1-201ENST00000254998 TOPAZ1Q8N9V7 1692 aa30.56■■■□□ 2.48
NXT1-201ENST00000254998 PMFBP1Q8TBY8 1022 aa30.55■■■□□ 2.48
NXT1-201ENST00000254998 CCDC61Q9Y6R9 512 aa30.55■■■□□ 2.48
NXT1-201ENST00000254998 SRPK2P78362 688 aaKnown RBP30.54■■■□□ 2.48
NXT1-201ENST00000254998 KRT28Q7Z3Y7 464 aa30.54■■■□□ 2.48
NXT1-201ENST00000254998 XPCQ01831 940 aaPredicted RBP30.53■■■□□ 2.48
NXT1-201ENST00000254998 PSME1Q06323 249 aa30.52■■■□□ 2.48
NXT1-201ENST00000254998 PLEKHG3A1L390 1219 aa30.51■■■□□ 2.47
NXT1-201ENST00000254998 CABP2Q9NPB3 220 aa30.51■■■□□ 2.47
NXT1-201ENST00000254998 SBNO1A3KN83 1393 aa30.51■■■□□ 2.47
NXT1-201ENST00000254998 DISP3Q9P2K9 1392 aa30.51■■■□□ 2.47
NXT1-201ENST00000254998 SPATA31A3Q5VYP0 1347 aa30.49■■■□□ 2.47
NXT1-201ENST00000254998 COL22A1Q8NFW1 1626 aaPredicted RBP30.49■■■□□ 2.47
NXT1-201ENST00000254998 POLR3AO14802 1390 aaPredicted RBP30.49■■■□□ 2.47
NXT1-201ENST00000254998 USP47Q96K76 1375 aa30.49■■■□□ 2.47
NXT1-201ENST00000254998 NGDNQ8NEJ9 315 aaKnown RBP30.48■■■□□ 2.47
NXT1-201ENST00000254998 LRP6O75581 1613 aa30.47■■■□□ 2.47
NXT1-201ENST00000254998 ST20-MTHFSA0A0A6YYL1 179 aa30.47■■■□□ 2.47
NXT1-201ENST00000254998 TNS3Q68CZ2 1445 aa30.47■■■□□ 2.47
NXT1-201ENST00000254998 SLC24A1O60721 1099 aa30.46■■■□□ 2.47
NXT1-201ENST00000254998 TESK2Q96S53 571 aa30.46■■■□□ 2.47
NXT1-201ENST00000254998 PPIP5K1Q6PFW1 1433 aa30.46■■■□□ 2.47
NXT1-201ENST00000254998 TRPM3Q9HCF6 1732 aaPredicted RBP30.44■■■□□ 2.46
NXT1-201ENST00000254998 ATAD2Q6PL18 1390 aa30.43■■■□□ 2.46
NXT1-201ENST00000254998 ACEP12821 1306 aa30.43■■■□□ 2.46
NXT1-201ENST00000254998 PUS7Q96PZ0 661 aaKnown RBP30.42■■■□□ 2.46
NXT1-201ENST00000254998 ARHGEF10O15013 1369 aa30.41■■■□□ 2.46
NXT1-201ENST00000254998 NUTM2BA6NNL0 878 aaPredicted RBP30.39■■■□□ 2.46
NXT1-201ENST00000254998 NUTM2EB1AL46 878 aaPredicted RBP30.39■■■□□ 2.46
NXT1-201ENST00000254998 NUTM2AQ8IVF1 878 aaPredicted RBP30.39■■■□□ 2.46
NXT1-201ENST00000254998 PHF23Q9BUL5 403 aaPredicted RBP30.38■■■□□ 2.45
NXT1-201ENST00000254998 CABP1Q9NZU7 370 aa30.38■■■□□ 2.45
NXT1-201ENST00000254998 ALS2Q96Q42 1657 aa30.37■■■□□ 2.45
NXT1-201ENST00000254998 BRD4O60885 1362 aaPredicted RBP30.36■■■□□ 2.45
NXT1-201ENST00000254998 MEX3CQ5U5Q3 659 aaKnown RBP30.35■■■□□ 2.45
NXT1-201ENST00000254998 RGS17Q9UGC6 210 aaPredicted RBP30.32■■■□□ 2.44
NXT1-201ENST00000254998 USP6P35125 1406 aa30.3■■■□□ 2.44
NXT1-201ENST00000254998 PAK3O75914 559 aaPredicted RBP30.29■■■□□ 2.44
NXT1-201ENST00000254998 TMF1P82094 1093 aa30.29■■■□□ 2.44
NXT1-201ENST00000254998 LMOD2Q6P5Q4 547 aa30.29■■■□□ 2.44
NXT1-201ENST00000254998 ZNF692Q9BU19 519 aaPredicted RBP30.28■■■□□ 2.44
NXT1-201ENST00000254998 CPSF1Q10570 1443 aaKnown RBP30.28■■■□□ 2.44
NXT1-201ENST00000254998 AKAP12Q02952 1782 aa30.26■■■□□ 2.44
NXT1-201ENST00000254998 ADAMTS2O95450 1211 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms