RNA–Protein interactions for RNA: ENST00000247829.7

TSPAN8-201, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-201ENST00000247829 FAM160A2Q8N612 972 aaPredicted RBP10.34□□□□□ -0.75
TSPAN8-201ENST00000247829 SUPT5HO00267 1087 aaKnown RBP10.33□□□□□ -0.76
TSPAN8-201ENST00000247829 S1PR4O95977 384 aa10.33□□□□□ -0.76
TSPAN8-201ENST00000247829 FDX1P10109 184 aa10.33□□□□□ -0.76
TSPAN8-201ENST00000247829 GGCXP38435 758 aa10.33□□□□□ -0.76
TSPAN8-201ENST00000247829 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
TSPAN8-201ENST00000247829 PPEF1O14829 653 aaPredicted RBP10.32□□□□□ -0.76
TSPAN8-201ENST00000247829 DIXDC1Q155Q3 683 aa10.32□□□□□ -0.76
TSPAN8-201ENST00000247829 SYMPKQ92797 1274 aaKnown RBP10.32□□□□□ -0.76
TSPAN8-201ENST00000247829 SLC6A16Q9GZN6 736 aa10.32□□□□□ -0.76
TSPAN8-201ENST00000247829 RNF223E7ERA6 249 aa10.31□□□□□ -0.76
TSPAN8-201ENST00000247829 USB1Q9BQ65 265 aaKnown RBP10.29□□□□□ -0.76
TSPAN8-201ENST00000247829 RGS20O76081 388 aa10.28□□□□□ -0.76
TSPAN8-201ENST00000247829 MYSM1Q5VVJ2 828 aa10.28□□□□□ -0.76
TSPAN8-201ENST00000247829 RSBN1LQ6PCB5 846 aaPredicted RBP10.28□□□□□ -0.76
TSPAN8-201ENST00000247829 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
TSPAN8-201ENST00000247829 GOPCQ9HD26 462 aa10.28□□□□□ -0.76
TSPAN8-201ENST00000247829 PCDHB15Q9Y5E8 787 aa10.28□□□□□ -0.76
TSPAN8-201ENST00000247829 C6orf229H3BNL8 230 aa10.27□□□□□ -0.77
TSPAN8-201ENST00000247829 SPTLC1O15269 473 aa10.27□□□□□ -0.77
TSPAN8-201ENST00000247829 HOMEZQ8IX15 550 aa10.27□□□□□ -0.77
TSPAN8-201ENST00000247829 PRDM9Q9NQV7 894 aa10.27□□□□□ -0.77
TSPAN8-201ENST00000247829 GJA5P36382 358 aa10.26□□□□□ -0.77
TSPAN8-201ENST00000247829 MSS51Q4VC12 460 aa10.26□□□□□ -0.77
TSPAN8-201ENST00000247829 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
TSPAN8-201ENST00000247829 ZMYND15Q9H091 742 aa10.25□□□□□ -0.77
TSPAN8-201ENST00000247829 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
TSPAN8-201ENST00000247829 POLR3EQ9NVU0 708 aa10.25□□□□□ -0.77
TSPAN8-201ENST00000247829 PRKD2Q9BZL6 878 aa10.24□□□□□ -0.77
TSPAN8-201ENST00000247829 LIMD1Q9UGP4 676 aa10.24□□□□□ -0.77
TSPAN8-201ENST00000247829 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
TSPAN8-201ENST00000247829 RETREG3Q86VR2 466 aa10.23□□□□□ -0.77
TSPAN8-201ENST00000247829 MTMR2Q13614 643 aa10.22□□□□□ -0.77
TSPAN8-201ENST00000247829 MMP16P51512 607 aa10.21□□□□□ -0.77
TSPAN8-201ENST00000247829 PLA2G2CQ5R387 149 aa10.21□□□□□ -0.77
TSPAN8-201ENST00000247829 EMID1Q96A84 441 aaPredicted RBP10.21□□□□□ -0.77
TSPAN8-201ENST00000247829 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
TSPAN8-201ENST00000247829 FCF1Q9Y324 198 aaKnown RBP10.21□□□□□ -0.77
TSPAN8-201ENST00000247829 DXOO77932 396 aaKnown RBP10.2□□□□□ -0.78
TSPAN8-201ENST00000247829 HRCP23327 699 aa10.2□□□□□ -0.78
TSPAN8-201ENST00000247829 FLIIQ13045 1269 aa10.2□□□□□ -0.78
TSPAN8-201ENST00000247829 SH3D19Q5HYK7 790 aa10.2□□□□□ -0.78
TSPAN8-201ENST00000247829 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
TSPAN8-201ENST00000247829 SPDYE5A6NIY4 337 aa10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 SLC19A1P41440 591 aa10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 CLK2P49760 499 aaKnown RBP10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 QPCTQ16769 361 aa10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 PRR7Q8TB68 274 aa10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 ZBTB3Q9H5J0 574 aa10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 V9GY48 417 aaPredicted RBP10.19□□□□□ -0.78
TSPAN8-201ENST00000247829 JUNDP17535 347 aa10.18□□□□□ -0.78
TSPAN8-201ENST00000247829 TUSC1Q2TAM9 212 aa10.18□□□□□ -0.78
TSPAN8-201ENST00000247829 PRPF38BQ5VTL8 546 aaKnown RBP10.18□□□□□ -0.78
TSPAN8-201ENST00000247829 LIAT1Q6ZQX7 453 aa10.18□□□□□ -0.78
TSPAN8-201ENST00000247829 PROCA1Q8NCQ7 364 aaPredicted RBP10.18□□□□□ -0.78
TSPAN8-201ENST00000247829 NUTM2BA6NNL0 878 aaPredicted RBP10.17□□□□□ -0.78
TSPAN8-201ENST00000247829 NUTM2EB1AL46 878 aaPredicted RBP10.17□□□□□ -0.78
TSPAN8-201ENST00000247829 NUTM2DQ5VT03 806 aaPredicted RBP10.17□□□□□ -0.78
TSPAN8-201ENST00000247829 NUTM2AQ8IVF1 878 aaPredicted RBP10.17□□□□□ -0.78
TSPAN8-201ENST00000247829 CFAP99D6REC4 459 aa10.16□□□□□ -0.78
TSPAN8-201ENST00000247829 LILRB3O75022 631 aa10.16□□□□□ -0.78
TSPAN8-201ENST00000247829 ATP1B4Q9UN42 357 aaPredicted RBP10.16□□□□□ -0.78
TSPAN8-201ENST00000247829 RTL5Q5HYW3 569 aaPredicted RBP10.15□□□□□ -0.78
TSPAN8-201ENST00000247829 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.78
TSPAN8-201ENST00000247829 SPRYD7Q5W111 196 aa10.13□□□□□ -0.79
TSPAN8-201ENST00000247829 DESI1Q6ICB0 168 aa10.12□□□□□ -0.79
TSPAN8-201ENST00000247829 ZBTB24O43167 697 aaPredicted RBP10.11□□□□□ -0.79
TSPAN8-201ENST00000247829 RPIAP49247 311 aa10.11□□□□□ -0.79
TSPAN8-201ENST00000247829 FBXO31Q5XUX0 539 aaPredicted RBP10.11□□□□□ -0.79
TSPAN8-201ENST00000247829 NUDT12Q9BQG2 462 aa10.11□□□□□ -0.79
TSPAN8-201ENST00000247829 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
TSPAN8-201ENST00000247829 CD2BP2O95400 341 aaKnown RBP10.1□□□□□ -0.79
TSPAN8-201ENST00000247829 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
TSPAN8-201ENST00000247829 ZNF598Q86UK7 904 aaKnown RBP10.1□□□□□ -0.79
TSPAN8-201ENST00000247829 TSC1Q92574 1164 aa10.1□□□□□ -0.79
TSPAN8-201ENST00000247829 MCM6Q14566 821 aa10.09□□□□□ -0.79
TSPAN8-201ENST00000247829 PTPRNQ16849 979 aa10.09□□□□□ -0.79
TSPAN8-201ENST00000247829 LYPD8Q6UX82 237 aa10.09□□□□□ -0.79
TSPAN8-201ENST00000247829 CCNYL3P0C7X3 344 aa10.08□□□□□ -0.8
TSPAN8-201ENST00000247829 IRX2Q9BZI1 471 aaPredicted RBP10.08□□□□□ -0.8
TSPAN8-201ENST00000247829 EVA1BQ9NVM1 165 aa10.08□□□□□ -0.8
TSPAN8-201ENST00000247829 PER1O15534 1290 aaPredicted RBP10.07□□□□□ -0.8
TSPAN8-201ENST00000247829 ZNF697Q5TEC3 545 aa10.07□□□□□ -0.8
TSPAN8-201ENST00000247829 C1orf115Q9H7X2 142 aa10.06□□□□□ -0.8
TSPAN8-201ENST00000247829 GFRA3O60609 400 aa10.05□□□□□ -0.8
TSPAN8-201ENST00000247829 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
TSPAN8-201ENST00000247829 TRIM32Q13049 653 aa10.05□□□□□ -0.8
TSPAN8-201ENST00000247829 PPP2R2DQ66LE6 453 aa10.05□□□□□ -0.8
TSPAN8-201ENST00000247829 CTDSPL2Q05D32 466 aa10.04□□□□□ -0.8
TSPAN8-201ENST00000247829 KCNH2Q12809 1159 aa10.04□□□□□ -0.8
TSPAN8-201ENST00000247829 TRIM67Q6ZTA4 783 aa10.04□□□□□ -0.8
TSPAN8-201ENST00000247829 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
TSPAN8-201ENST00000247829 PDZRN3Q9UPQ7 1066 aa10.04□□□□□ -0.8
TSPAN8-201ENST00000247829 A6NJR5 290 aa10.03□□□□□ -0.8
TSPAN8-201ENST00000247829 CTHP32929 405 aa10.03□□□□□ -0.8
TSPAN8-201ENST00000247829 HELBQ8NG08 1087 aaPredicted RBP10.03□□□□□ -0.8
TSPAN8-201ENST00000247829 ARID3CA6NKF2 412 aa10.02□□□□□ -0.81
TSPAN8-201ENST00000247829 FOXC1Q12948 553 aa10.02□□□□□ -0.81
TSPAN8-201ENST00000247829 GDF9O60383 454 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms