RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 TMEM132EQ6IEE7 984 aa28.25■■■□□ 2.11
SH2D3A-201ENST00000245908 SLC12A5Q9H2X9 1139 aa28.23■■■□□ 2.11
SH2D3A-201ENST00000245908 MORC1Q86VD1 984 aa28.23■■■□□ 2.11
SH2D3A-201ENST00000245908 ARHGAP31Q2M1Z3 1444 aa28.23■■■□□ 2.11
SH2D3A-201ENST00000245908 PUS7Q96PZ0 661 aaKnown RBP28.22■■■□□ 2.11
SH2D3A-201ENST00000245908 NPM2Q86SE8 214 aaKnown RBP28.21■■■□□ 2.11
SH2D3A-201ENST00000245908 RICTORQ6R327 1708 aa28.21■■■□□ 2.11
SH2D3A-201ENST00000245908 SKAP1Q86WV1 359 aa28.2■■■□□ 2.11
SH2D3A-201ENST00000245908 TULP4Q9NRJ4 1543 aa28.2■■■□□ 2.1
SH2D3A-201ENST00000245908 DMRT2Q9Y5R5 561 aa28.19■■■□□ 2.1
SH2D3A-201ENST00000245908 VGFO15240 615 aaPredicted RBP28.18■■■□□ 2.1
SH2D3A-201ENST00000245908 RAPGEF3O95398 923 aa28.18■■■□□ 2.1
SH2D3A-201ENST00000245908 IQSEC2Q5JU85 1478 aa28.17■■■□□ 2.1
SH2D3A-201ENST00000245908 WWC1Q8IX03 1113 aa28.16■■■□□ 2.1
SH2D3A-201ENST00000245908 CGNL1Q0VF96 1302 aa28.16■■■□□ 2.1
SH2D3A-201ENST00000245908 EVC2Q86UK5 1308 aa28.15■■■□□ 2.1
SH2D3A-201ENST00000245908 BCAR3O75815 825 aa28.15■■■□□ 2.1
SH2D3A-201ENST00000245908 ZFYVE9O95405 1425 aa28.14■■■□□ 2.1
SH2D3A-201ENST00000245908 ANKRD36BQ8N2N9 1353 aa28.14■■■□□ 2.1
SH2D3A-201ENST00000245908 NBR1Q14596 966 aa28.14■■■□□ 2.1
SH2D3A-201ENST00000245908 RUNDC1Q96C34 613 aa28.13■■■□□ 2.09
SH2D3A-201ENST00000245908 NSD2O96028 1365 aa28.13■■■□□ 2.09
SH2D3A-201ENST00000245908 NINLQ9Y2I6 1382 aa28.13■■■□□ 2.09
SH2D3A-201ENST00000245908 TNNT2P45379 298 aaPredicted RBP28.11■■■□□ 2.09
SH2D3A-201ENST00000245908 NUTM2DQ5VT03 806 aaPredicted RBP28.09■■■□□ 2.09
SH2D3A-201ENST00000245908 PHF23Q9BUL5 403 aaPredicted RBP28.09■■■□□ 2.09
SH2D3A-201ENST00000245908 PDE3AQ14432 1141 aa28.08■■■□□ 2.09
SH2D3A-201ENST00000245908 IDI1Q13907 227 aa28.08■■■□□ 2.09
SH2D3A-201ENST00000245908 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
SH2D3A-201ENST00000245908 MYO5BQ9ULV0 1848 aa28.07■■■□□ 2.08
SH2D3A-201ENST00000245908 MTHFSP49914 203 aa28.07■■■□□ 2.08
SH2D3A-201ENST00000245908 CFAP53Q96M91 514 aa28.07■■■□□ 2.08
SH2D3A-201ENST00000245908 SLC52A1Q9NWF4 448 aa28.07■■■□□ 2.08
SH2D3A-201ENST00000245908 YEATS2Q9ULM3 1422 aa28.06■■■□□ 2.08
SH2D3A-201ENST00000245908 TMEM131LA2VDJ0 1609 aa28.05■■■□□ 2.08
SH2D3A-201ENST00000245908 TCP11L2Q8N4U5 519 aa28.05■■■□□ 2.08
SH2D3A-201ENST00000245908 DDRGK1Q96HY6 314 aa28.03■■■□□ 2.08
SH2D3A-201ENST00000245908 FAM161AQ3B820 660 aa28.03■■■□□ 2.08
SH2D3A-201ENST00000245908 NCBP3Q53F19 620 aaKnown RBP28.03■■■□□ 2.08
SH2D3A-201ENST00000245908 WDR63Q8IWG1 891 aa28.03■■■□□ 2.08
SH2D3A-201ENST00000245908 CCDC27Q2M243 656 aa28.02■■■□□ 2.08
SH2D3A-201ENST00000245908 CABP2Q9NPB3 220 aa28.01■■■□□ 2.07
SH2D3A-201ENST00000245908 ADGRB2O60241 1585 aa28■■■□□ 2.07
SH2D3A-201ENST00000245908 C8orf34Q49A92 452 aa28■■■□□ 2.07
SH2D3A-201ENST00000245908 RRP7AQ9Y3A4 280 aaKnown RBP28■■■□□ 2.07
SH2D3A-201ENST00000245908 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
SH2D3A-201ENST00000245908 NEUROD2Q15784 382 aa27.99■■■□□ 2.07
SH2D3A-201ENST00000245908 PTPRMP28827 1452 aa27.99■■■□□ 2.07
SH2D3A-201ENST00000245908 CLTCQ00610 1675 aaKnown RBP27.99■■■□□ 2.07
SH2D3A-201ENST00000245908 RTL5Q5HYW3 569 aaPredicted RBP27.98■■■□□ 2.07
SH2D3A-201ENST00000245908 A0A1W2PP64 1363 aa27.97■■■□□ 2.07
SH2D3A-201ENST00000245908 RARSP54136 660 aaKnown RBP27.96■■■□□ 2.07
SH2D3A-201ENST00000245908 ANKRD26Q9UPS8 1709 aa27.96■■■□□ 2.07
SH2D3A-201ENST00000245908 CANXP27824 592 aaKnown RBP27.95■■■□□ 2.07
SH2D3A-201ENST00000245908 CLUAP1Q96AJ1 413 aa27.94■■■□□ 2.06
SH2D3A-201ENST00000245908 SAFB2Q14151 953 aaKnown RBP eCLIP27.93■■■□□ 2.06
SH2D3A-201ENST00000245908 PANK1Q8TE04 598 aa27.93■■■□□ 2.06
SH2D3A-201ENST00000245908 VIRMAQ69YN4 1812 aaKnown RBP27.93■■■□□ 2.06
SH2D3A-201ENST00000245908 ATAD2Q6PL18 1390 aa27.93■■■□□ 2.06
SH2D3A-201ENST00000245908 IGHDP01880 384 aa27.93■■■□□ 2.06
SH2D3A-201ENST00000245908 RGS3P49796 1198 aa27.93■■■□□ 2.06
SH2D3A-201ENST00000245908 STK26Q9P289 416 aa27.92■■■□□ 2.06
SH2D3A-201ENST00000245908 COG6Q9Y2V7 657 aa27.92■■■□□ 2.06
SH2D3A-201ENST00000245908 YTHDC2Q9H6S0 1430 aaKnown RBP27.91■■■□□ 2.06
SH2D3A-201ENST00000245908 MED14O60244 1454 aa27.91■■■□□ 2.06
SH2D3A-201ENST00000245908 AAMPQ13685 434 aa27.9■■■□□ 2.06
SH2D3A-201ENST00000245908 U2AF1L5P0DN76 240 aaPredicted RBP27.9■■■□□ 2.06
SH2D3A-201ENST00000245908 SRPK2P78362 688 aaKnown RBP27.9■■■□□ 2.06
SH2D3A-201ENST00000245908 U2AF1Q01081 240 aaKnown RBP eCLIP27.9■■■□□ 2.06
SH2D3A-201ENST00000245908 COL3A1P02461 1466 aaPredicted RBP27.89■■■□□ 2.06
SH2D3A-201ENST00000245908 PPM1GO15355 546 aaPredicted RBP27.88■■■□□ 2.05
SH2D3A-201ENST00000245908 MYH16Q9H6N6 1097 aa27.88■■■□□ 2.05
SH2D3A-201ENST00000245908 CD163L1Q9NR16 1453 aa27.88■■■□□ 2.05
SH2D3A-201ENST00000245908 FRAT1Q92837 279 aaPredicted RBP27.88■■■□□ 2.05
SH2D3A-201ENST00000245908 LAS1LQ9Y4W2 734 aaKnown RBP27.88■■■□□ 2.05
SH2D3A-201ENST00000245908 ALKQ9UM73 1620 aa27.87■■■□□ 2.05
SH2D3A-201ENST00000245908 NLRP1Q9C000 1473 aa27.86■■■□□ 2.05
SH2D3A-201ENST00000245908 USP35Q9P2H5 1018 aa27.86■■■□□ 2.05
SH2D3A-201ENST00000245908 PRAM1Q96QH2 718 aa27.85■■■□□ 2.05
SH2D3A-201ENST00000245908 ANO8Q9HCE9 1232 aaPredicted RBP27.85■■■□□ 2.05
SH2D3A-201ENST00000245908 TERF2IPQ9NYB0 399 aa27.85■■■□□ 2.05
SH2D3A-201ENST00000245908 MINK1Q8N4C8 1332 aaPredicted RBP27.84■■■□□ 2.05
SH2D3A-201ENST00000245908 MAPK8IP3Q9UPT6 1336 aa27.83■■■□□ 2.05
SH2D3A-201ENST00000245908 GGNBP2Q9H3C7 697 aa27.83■■■□□ 2.05
SH2D3A-201ENST00000245908 POGKQ9P215 609 aa27.82■■■□□ 2.04
SH2D3A-201ENST00000245908 REREQ9P2R6 1566 aa27.82■■■□□ 2.04
SH2D3A-201ENST00000245908 PLEKHF1Q96S99 279 aa27.81■■■□□ 2.04
SH2D3A-201ENST00000245908 ARHGEF40Q8TER5 1519 aa27.81■■■□□ 2.04
SH2D3A-201ENST00000245908 FYB1O15117 783 aa27.81■■■□□ 2.04
SH2D3A-201ENST00000245908 FBXO31Q5XUX0 539 aaPredicted RBP27.81■■■□□ 2.04
SH2D3A-201ENST00000245908 RLBP1P12271 317 aa27.8■■■□□ 2.04
SH2D3A-201ENST00000245908 PMFBP1Q8TBY8 1022 aa27.8■■■□□ 2.04
SH2D3A-201ENST00000245908 KIF20BQ96Q89 1820 aa27.8■■■□□ 2.04
SH2D3A-201ENST00000245908 NEFMP07197 916 aa27.8■■■□□ 2.04
SH2D3A-201ENST00000245908 CT47B1P0C2W7 299 aaPredicted RBP27.8■■■□□ 2.04
SH2D3A-201ENST00000245908 SENP3Q9H4L4 574 aaPredicted RBP27.79■■■□□ 2.04
SH2D3A-201ENST00000245908 TNNQ9UQP3 1299 aa27.78■■■□□ 2.04
SH2D3A-201ENST00000245908 AGLP35573 1532 aa27.78■■■□□ 2.04
SH2D3A-201ENST00000245908 BCL2L13Q9BXK5 485 aa27.77■■■□□ 2.04
SH2D3A-201ENST00000245908 DLC1Q96QB1 1528 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms