RNA–Protein interactions for RNA: ENST00000243562.13

LTBP4-202, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 3,140 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-202ENST00000243562 BECN1Q14457 450 aa18.17■□□□□ 0.5
LTBP4-202ENST00000243562 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
LTBP4-202ENST00000243562 NOS1P29475 1434 aa18.16■□□□□ 0.5
LTBP4-202ENST00000243562 NUTM2DQ5VT03 806 aaPredicted RBP18.16■□□□□ 0.5
LTBP4-202ENST00000243562 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
LTBP4-202ENST00000243562 UPF2Q9HAU5 1272 aaKnown RBP18.16■□□□□ 0.5
LTBP4-202ENST00000243562 ADGRL1O94910 1474 aa18.15■□□□□ 0.5
LTBP4-202ENST00000243562 U2AF1L5P0DN76 240 aaPredicted RBP18.15■□□□□ 0.5
LTBP4-202ENST00000243562 U2AF1Q01081 240 aaKnown RBP eCLIP18.15■□□□□ 0.5
LTBP4-202ENST00000243562 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
LTBP4-202ENST00000243562 RLBP1P12271 317 aa18.14■□□□□ 0.5
LTBP4-202ENST00000243562 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.5
LTBP4-202ENST00000243562 MAP3K4Q9Y6R4 1608 aa18.14■□□□□ 0.49
LTBP4-202ENST00000243562 USP19O94966 1318 aa18.13■□□□□ 0.49
LTBP4-202ENST00000243562 ABCA6Q8N139 1617 aa18.13■□□□□ 0.49
LTBP4-202ENST00000243562 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
LTBP4-202ENST00000243562 MYOM2P54296 1465 aa18.13■□□□□ 0.49
LTBP4-202ENST00000243562 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
LTBP4-202ENST00000243562 PDZRN3Q9UPQ7 1066 aa18.12■□□□□ 0.49
LTBP4-202ENST00000243562 RWDD1Q9H446 243 aaPredicted RBP18.12■□□□□ 0.49
LTBP4-202ENST00000243562 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
LTBP4-202ENST00000243562 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
LTBP4-202ENST00000243562 KIAA1210Q9ULL0 1709 aa18.11■□□□□ 0.49
LTBP4-202ENST00000243562 MYH16Q9H6N6 1097 aa18.11■□□□□ 0.49
LTBP4-202ENST00000243562 FTSJ3Q8IY81 847 aaKnown RBP18.1■□□□□ 0.49
LTBP4-202ENST00000243562 SBNO2Q9Y2G9 1366 aa18.09■□□□□ 0.49
LTBP4-202ENST00000243562 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
LTBP4-202ENST00000243562 ARAP3Q8WWN8 1544 aa18.08■□□□□ 0.49
LTBP4-202ENST00000243562 VWDEQ8N2E2 1590 aa18.08■□□□□ 0.48
LTBP4-202ENST00000243562 KIF1BO60333 1816 aa18.07■□□□□ 0.48
LTBP4-202ENST00000243562 AAMPQ13685 434 aa18.07■□□□□ 0.48
LTBP4-202ENST00000243562 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
LTBP4-202ENST00000243562 SPRYD3Q8NCJ5 442 aa18.06■□□□□ 0.48
LTBP4-202ENST00000243562 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
LTBP4-202ENST00000243562 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
LTBP4-202ENST00000243562 ZKSCAN2Q63HK3 967 aa18.06■□□□□ 0.48
LTBP4-202ENST00000243562 INO80Q9ULG1 1556 aaPredicted RBP18.05■□□□□ 0.48
LTBP4-202ENST00000243562 STK26Q9P289 416 aa18.05■□□□□ 0.48
LTBP4-202ENST00000243562 DZIP1LQ8IYY4 767 aaKnown RBP18.05■□□□□ 0.48
LTBP4-202ENST00000243562 PHF23Q9BUL5 403 aaPredicted RBP18.05■□□□□ 0.48
LTBP4-202ENST00000243562 SMC4Q9NTJ3 1288 aa18.05■□□□□ 0.48
LTBP4-202ENST00000243562 CFAP65Q6ZU64 1925 aaKnown RBP18.04■□□□□ 0.48
LTBP4-202ENST00000243562 MVPQ14764 893 aaKnown RBP18.04■□□□□ 0.48
LTBP4-202ENST00000243562 CCDC27Q2M243 656 aa18.04■□□□□ 0.48
LTBP4-202ENST00000243562 EFCAB6Q5THR3 1501 aa18.03■□□□□ 0.48
LTBP4-202ENST00000243562 POGKQ9P215 609 aa18.03■□□□□ 0.48
LTBP4-202ENST00000243562 NPM1P06748 294 aaKnown RBP eCLIP18.03■□□□□ 0.48
LTBP4-202ENST00000243562 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
LTBP4-202ENST00000243562 EXOSC9Q06265 439 aaKnown RBP18.02■□□□□ 0.48
LTBP4-202ENST00000243562 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.47
LTBP4-202ENST00000243562 MROH1Q8NDA8 1641 aa18.01■□□□□ 0.47
LTBP4-202ENST00000243562 TBC1D32Q96NH3 1257 aa18.01■□□□□ 0.47
LTBP4-202ENST00000243562 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
LTBP4-202ENST00000243562 ITPRIPQ8IWB1 547 aa18.01■□□□□ 0.47
LTBP4-202ENST00000243562 NRXN1Q9ULB1 1477 aa18.01■□□□□ 0.47
LTBP4-202ENST00000243562 VGFO15240 615 aaPredicted RBP18.01■□□□□ 0.47
LTBP4-202ENST00000243562 MROH2AA6NES4 1674 aa18■□□□□ 0.47
LTBP4-202ENST00000243562 TBC1D2Q9BYX2 928 aa18■□□□□ 0.47
LTBP4-202ENST00000243562 ZNF518AQ6AHZ1 1483 aa18■□□□□ 0.47
LTBP4-202ENST00000243562 RPGRIP1LQ68CZ1 1315 aa18■□□□□ 0.47
LTBP4-202ENST00000243562 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
LTBP4-202ENST00000243562 ARXQ96QS3 562 aa17.99■□□□□ 0.47
LTBP4-202ENST00000243562 PPRC1Q5VV67 1664 aaKnown RBP17.99■□□□□ 0.47
LTBP4-202ENST00000243562 ABCA9Q8IUA7 1624 aa17.99■□□□□ 0.47
LTBP4-202ENST00000243562 ASXL2Q76L83 1435 aa17.99■□□□□ 0.47
LTBP4-202ENST00000243562 NPATQ14207 1427 aa17.99■□□□□ 0.47
LTBP4-202ENST00000243562 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
LTBP4-202ENST00000243562 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
LTBP4-202ENST00000243562 SHPRHQ149N8 1683 aa17.97■□□□□ 0.47
LTBP4-202ENST00000243562 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
LTBP4-202ENST00000243562 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
LTBP4-202ENST00000243562 ADGRB3O60242 1522 aa17.96■□□□□ 0.47
LTBP4-202ENST00000243562 TRIM27P14373 513 aa17.96■□□□□ 0.47
LTBP4-202ENST00000243562 SETBP1Q9Y6X0 1596 aa17.95■□□□□ 0.46
LTBP4-202ENST00000243562 MYO3AQ8NEV4 1616 aa17.95■□□□□ 0.46
LTBP4-202ENST00000243562 NOB1Q9ULX3 412 aaKnown RBP17.95■□□□□ 0.46
LTBP4-202ENST00000243562 C22orf23Q9BZE7 217 aa17.95■□□□□ 0.46
LTBP4-202ENST00000243562 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
LTBP4-202ENST00000243562 RIPK4P57078 832 aa17.94■□□□□ 0.46
LTBP4-202ENST00000243562 DDX19BQ9UMR2 479 aa17.94■□□□□ 0.46
LTBP4-202ENST00000243562 ANTXR1Q9H6X2 564 aa17.94■□□□□ 0.46
LTBP4-202ENST00000243562 IFT172Q9UG01 1749 aa17.94■□□□□ 0.46
LTBP4-202ENST00000243562 ATF7IPQ6VMQ6 1270 aa17.94■□□□□ 0.46
LTBP4-202ENST00000243562 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
LTBP4-202ENST00000243562 CT47B1P0C2W7 299 aaPredicted RBP17.93■□□□□ 0.46
LTBP4-202ENST00000243562 KIDINS220Q9ULH0 1771 aa17.93■□□□□ 0.46
LTBP4-202ENST00000243562 NSD2O96028 1365 aa17.93■□□□□ 0.46
LTBP4-202ENST00000243562 NLRP1Q9C000 1473 aa17.92■□□□□ 0.46
LTBP4-202ENST00000243562 PUS7Q96PZ0 661 aaKnown RBP17.92■□□□□ 0.46
LTBP4-202ENST00000243562 TRIM35Q9UPQ4 493 aa17.92■□□□□ 0.46
LTBP4-202ENST00000243562 ADGRB1O14514 1584 aa17.92■□□□□ 0.46
LTBP4-202ENST00000243562 LMTK2Q8IWU2 1503 aa17.92■□□□□ 0.46
LTBP4-202ENST00000243562 TMEM57Q8N5G2 664 aa17.91■□□□□ 0.46
LTBP4-202ENST00000243562 GZF1Q9H116 711 aaPredicted RBP17.91■□□□□ 0.46
LTBP4-202ENST00000243562 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
LTBP4-202ENST00000243562 RAPGEF3O95398 923 aa17.9■□□□□ 0.46
LTBP4-202ENST00000243562 IDI1Q13907 227 aa17.9■□□□□ 0.46
LTBP4-202ENST00000243562 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
LTBP4-202ENST00000243562 PLEKHF1Q96S99 279 aa17.9■□□□□ 0.46
LTBP4-202ENST00000243562 A0A1W2PP64 1363 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms