RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.11■□□□□ 0.01
TNFAIP3-201ENST00000237289 PANK3Q9H999 370 aa15.11■□□□□ 0.01
TNFAIP3-201ENST00000237289 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
TNFAIP3-201ENST00000237289 ALKQ9UM73 1620 aa15.11■□□□□ 0.01
TNFAIP3-201ENST00000237289 KIF7Q2M1P5 1343 aa15.1■□□□□ 0.01
TNFAIP3-201ENST00000237289 NEURL4Q96JN8 1562 aa15.1■□□□□ 0.01
TNFAIP3-201ENST00000237289 UBR1Q8IWV7 1749 aa15.09■□□□□ 0.01
TNFAIP3-201ENST00000237289 SLC12A5Q9H2X9 1139 aa15.09■□□□□ 0.01
TNFAIP3-201ENST00000237289 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
TNFAIP3-201ENST00000237289 SOX12O15370 315 aa15.09■□□□□ 0.01
TNFAIP3-201ENST00000237289 CC2D1BQ5T0F9 858 aaKnown RBP15.09■□□□□ 0.01
TNFAIP3-201ENST00000237289 PHF8Q9UPP1 1060 aa15.08■□□□□ 0
TNFAIP3-201ENST00000237289 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0
TNFAIP3-201ENST00000237289 ROBO2Q9HCK4 1378 aa15.08■□□□□ 0
TNFAIP3-201ENST00000237289 CCDC7Q96M83 1385 aa15.07■□□□□ 0
TNFAIP3-201ENST00000237289 TNNT2P45379 298 aaPredicted RBP15.07■□□□□ 0
TNFAIP3-201ENST00000237289 MORC1Q86VD1 984 aa15.07■□□□□ 0
TNFAIP3-201ENST00000237289 PPM1GO15355 546 aaPredicted RBP15.06■□□□□ 0
TNFAIP3-201ENST00000237289 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
TNFAIP3-201ENST00000237289 FOXO3O43524 673 aa15.05■□□□□ 0
TNFAIP3-201ENST00000237289 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
TNFAIP3-201ENST00000237289 WASHC2AQ641Q2 1341 aa15.04■□□□□ -0
TNFAIP3-201ENST00000237289 FAM135BQ49AJ0 1406 aa15.04■□□□□ -0
TNFAIP3-201ENST00000237289 TESK2Q96S53 571 aa15.04■□□□□ -0
TNFAIP3-201ENST00000237289 NRXN1Q9ULB1 1477 aa15.03■□□□□ -0
TNFAIP3-201ENST00000237289 XPCQ01831 940 aaPredicted RBP15.03■□□□□ -0
TNFAIP3-201ENST00000237289 COG3Q96JB2 828 aa15.03■□□□□ -0
TNFAIP3-201ENST00000237289 SLAIN2Q9P270 581 aa15.03■□□□□ -0
TNFAIP3-201ENST00000237289 PPLO60437 1756 aa15.02■□□□□ -0
TNFAIP3-201ENST00000237289 NEFMP07197 916 aa15.02■□□□□ -0
TNFAIP3-201ENST00000237289 ABTB2Q8N961 1025 aa15.02□□□□□ -0.01
TNFAIP3-201ENST00000237289 MYO5BQ9ULV0 1848 aa15.02□□□□□ -0.01
TNFAIP3-201ENST00000237289 PUS7Q96PZ0 661 aaKnown RBP15.01□□□□□ -0.01
TNFAIP3-201ENST00000237289 LAMC1P11047 1609 aa15.01□□□□□ -0.01
TNFAIP3-201ENST00000237289 DISP3Q9P2K9 1392 aa15.01□□□□□ -0.01
TNFAIP3-201ENST00000237289 NLRP6P59044 892 aa15.01□□□□□ -0.01
TNFAIP3-201ENST00000237289 CFAP53Q96M91 514 aa15.01□□□□□ -0.01
TNFAIP3-201ENST00000237289 DIP2AQ14689 1571 aa15.01□□□□□ -0.01
TNFAIP3-201ENST00000237289 KTN1Q86UP2 1357 aaKnown RBP15□□□□□ -0.01
TNFAIP3-201ENST00000237289 MED14O60244 1454 aa15□□□□□ -0.01
TNFAIP3-201ENST00000237289 SETBP1Q9Y6X0 1596 aa15□□□□□ -0.01
TNFAIP3-201ENST00000237289 KDM5AP29375 1690 aaKnown RBP15□□□□□ -0.01
TNFAIP3-201ENST00000237289 C11orf95C9JLR9 678 aaPredicted RBP14.99□□□□□ -0.01
TNFAIP3-201ENST00000237289 NUTM2GQ5VZR2 741 aa14.99□□□□□ -0.01
TNFAIP3-201ENST00000237289 ACEP12821 1306 aa14.99□□□□□ -0.01
TNFAIP3-201ENST00000237289 KRT28Q7Z3Y7 464 aa14.99□□□□□ -0.01
TNFAIP3-201ENST00000237289 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
TNFAIP3-201ENST00000237289 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
TNFAIP3-201ENST00000237289 PTPRUQ92729 1446 aa14.98□□□□□ -0.01
TNFAIP3-201ENST00000237289 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
TNFAIP3-201ENST00000237289 ZNF142P52746 1687 aaPredicted RBP14.98□□□□□ -0.01
TNFAIP3-201ENST00000237289 CERKQ8TCT0 537 aa14.98□□□□□ -0.01
TNFAIP3-201ENST00000237289 IQGAP1P46940 1657 aa14.98□□□□□ -0.01
TNFAIP3-201ENST00000237289 PTCH1Q13635 1447 aa14.97□□□□□ -0.01
TNFAIP3-201ENST00000237289 TRPM1Q7Z4N2 1603 aa14.97□□□□□ -0.01
TNFAIP3-201ENST00000237289 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
TNFAIP3-201ENST00000237289 PPIP5K1Q6PFW1 1433 aa14.97□□□□□ -0.01
TNFAIP3-201ENST00000237289 NLRP13Q86W25 1043 aa14.97□□□□□ -0.01
TNFAIP3-201ENST00000237289 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
TNFAIP3-201ENST00000237289 ADGRL3Q9HAR2 1447 aa14.95□□□□□ -0.02
TNFAIP3-201ENST00000237289 AMPHP49418 695 aa14.95□□□□□ -0.02
TNFAIP3-201ENST00000237289 RALBP1Q15311 655 aa14.95□□□□□ -0.02
TNFAIP3-201ENST00000237289 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
TNFAIP3-201ENST00000237289 WDR43Q15061 677 aaKnown RBP eCLIP14.94□□□□□ -0.02
TNFAIP3-201ENST00000237289 NKTRP30414 1462 aaKnown RBP14.94□□□□□ -0.02
TNFAIP3-201ENST00000237289 MEX3CQ5U5Q3 659 aaKnown RBP14.93□□□□□ -0.02
TNFAIP3-201ENST00000237289 NUDCQ9Y266 331 aa14.93□□□□□ -0.02
TNFAIP3-201ENST00000237289 TECPR2O15040 1411 aa14.92□□□□□ -0.02
TNFAIP3-201ENST00000237289 DLC1Q96QB1 1528 aa14.92□□□□□ -0.02
TNFAIP3-201ENST00000237289 CSB-PGBD3P0DP91 1061 aa14.92□□□□□ -0.02
TNFAIP3-201ENST00000237289 KIAA1210Q9ULL0 1709 aa14.92□□□□□ -0.02
TNFAIP3-201ENST00000237289 ADGRB1O14514 1584 aa14.91□□□□□ -0.02
TNFAIP3-201ENST00000237289 NUTM2BA6NNL0 878 aaPredicted RBP14.91□□□□□ -0.02
TNFAIP3-201ENST00000237289 NUTM2EB1AL46 878 aaPredicted RBP14.91□□□□□ -0.02
TNFAIP3-201ENST00000237289 NUTM2AQ8IVF1 878 aaPredicted RBP14.91□□□□□ -0.02
TNFAIP3-201ENST00000237289 PLEKHG3A1L390 1219 aa14.91□□□□□ -0.02
TNFAIP3-201ENST00000237289 NSD3Q9BZ95 1437 aa14.91□□□□□ -0.02
TNFAIP3-201ENST00000237289 YTHDC1Q96MU7 727 aaKnown RBP14.91□□□□□ -0.02
TNFAIP3-201ENST00000237289 LRRC59Q96AG4 307 aaKnown RBP14.9□□□□□ -0.02
TNFAIP3-201ENST00000237289 NCOA3Q9Y6Q9 1424 aa14.9□□□□□ -0.02
TNFAIP3-201ENST00000237289 ANKRD36BQ8N2N9 1353 aa14.9□□□□□ -0.02
TNFAIP3-201ENST00000237289 CPS1P31327 1500 aa14.89□□□□□ -0.03
TNFAIP3-201ENST00000237289 FAM9BQ8IZU0 186 aa14.89□□□□□ -0.03
TNFAIP3-201ENST00000237289 U2SURPO15042 1029 aaKnown RBP14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 NME9Q86XW9 330 aa14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 CCDC9Q9Y3X0 531 aaKnown RBP14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 TTC21BQ7Z4L5 1316 aa14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 EVA1CP58658 441 aa14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 DDX17Q92841 729 aaKnown RBP14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 POLR1AO95602 1720 aaPredicted RBP14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 TTC21AQ8NDW8 1320 aa14.88□□□□□ -0.03
TNFAIP3-201ENST00000237289 PRR36Q9H6K5 1346 aa14.87□□□□□ -0.03
TNFAIP3-201ENST00000237289 MIER1Q8N108 512 aa14.87□□□□□ -0.03
TNFAIP3-201ENST00000237289 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
TNFAIP3-201ENST00000237289 LTV1Q96GA3 475 aaPredicted RBP14.87□□□□□ -0.03
TNFAIP3-201ENST00000237289 A0A0G2JS52 829 aa14.86□□□□□ -0.03
TNFAIP3-201ENST00000237289 MYT1Q01538 1121 aa14.86□□□□□ -0.03
TNFAIP3-201ENST00000237289 BRINP3Q76B58 766 aa14.86□□□□□ -0.03
TNFAIP3-201ENST00000237289 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
TNFAIP3-201ENST00000237289 ANKARQ7Z5J8 1434 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms