RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 PLEKHH1Q9ULM0 1364 aa27.53■■■□□ 2
CENPA-201ENST00000233505 ROCK2O75116 1388 aaKnown RBP27.52■■■□□ 2
CENPA-201ENST00000233505 WAPLQ7Z5K2 1190 aa27.52■■■□□ 2
CENPA-201ENST00000233505 TRAK1Q9UPV9 953 aa27.52■■■□□ 2
CENPA-201ENST00000233505 PRAM1Q96QH2 718 aa27.51■■□□□ 1.99
CENPA-201ENST00000233505 ATF3P18847 181 aa27.5■■□□□ 1.99
CENPA-201ENST00000233505 ILDR2Q71H61 639 aa27.5■■□□□ 1.99
CENPA-201ENST00000233505 NALCNQ8IZF0 1738 aa27.48■■□□□ 1.99
CENPA-201ENST00000233505 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.48■■□□□ 1.99
CENPA-201ENST00000233505 CDC42BPGQ6DT37 1551 aa27.48■■□□□ 1.99
CENPA-201ENST00000233505 POGKQ9P215 609 aa27.47■■□□□ 1.99
CENPA-201ENST00000233505 SLAIN2Q9P270 581 aa27.45■■□□□ 1.98
CENPA-201ENST00000233505 MST1RQ04912 1400 aa27.43■■□□□ 1.98
CENPA-201ENST00000233505 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
CENPA-201ENST00000233505 ARHGEF28Q8N1W1 1705 aaKnown RBP27.42■■□□□ 1.98
CENPA-201ENST00000233505 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
CENPA-201ENST00000233505 EIF3AQ14152 1382 aaKnown RBP27.4■■□□□ 1.98
CENPA-201ENST00000233505 CARD11Q9BXL7 1154 aa27.39■■□□□ 1.98
CENPA-201ENST00000233505 ROBO1Q9Y6N7 1651 aa27.38■■□□□ 1.97
CENPA-201ENST00000233505 SAFB2Q14151 953 aaKnown RBP eCLIP27.38■■□□□ 1.97
CENPA-201ENST00000233505 CENPJQ9HC77 1338 aaPredicted RBP27.38■■□□□ 1.97
CENPA-201ENST00000233505 C1orf167Q5SNV9 1468 aa27.37■■□□□ 1.97
CENPA-201ENST00000233505 MINK1Q8N4C8 1332 aaPredicted RBP27.32■■□□□ 1.96
CENPA-201ENST00000233505 BRINP3Q76B58 766 aa27.31■■□□□ 1.96
CENPA-201ENST00000233505 ANKARQ7Z5J8 1434 aa27.31■■□□□ 1.96
CENPA-201ENST00000233505 WASLO00401 505 aaPredicted RBP27.3■■□□□ 1.96
CENPA-201ENST00000233505 SBNO2Q9Y2G9 1366 aa27.3■■□□□ 1.96
CENPA-201ENST00000233505 FMN2Q9NZ56 1722 aa27.29■■□□□ 1.96
CENPA-201ENST00000233505 HIRIP3Q9BW71 556 aaPredicted RBP27.28■■□□□ 1.96
CENPA-201ENST00000233505 TULP4Q9NRJ4 1543 aa27.26■■□□□ 1.95
CENPA-201ENST00000233505 AHDC1Q5TGY3 1603 aaPredicted RBP27.24■■□□□ 1.95
CENPA-201ENST00000233505 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
CENPA-201ENST00000233505 USP47Q96K76 1375 aa27.22■■□□□ 1.95
CENPA-201ENST00000233505 QRICH2Q9H0J4 1663 aa27.22■■□□□ 1.95
CENPA-201ENST00000233505 ORAI2Q96SN7 254 aa27.22■■□□□ 1.95
CENPA-201ENST00000233505 PHLPP1O60346 1717 aa27.2■■□□□ 1.94
CENPA-201ENST00000233505 ESCO1Q5FWF5 840 aa27.2■■□□□ 1.94
CENPA-201ENST00000233505 CDK19Q9BWU1 502 aa27.2■■□□□ 1.94
CENPA-201ENST00000233505 ATP7BP35670 1465 aa27.19■■□□□ 1.94
CENPA-201ENST00000233505 NUTM2FA1L443 756 aa27.19■■□□□ 1.94
CENPA-201ENST00000233505 EVC2Q86UK5 1308 aa27.18■■□□□ 1.94
CENPA-201ENST00000233505 PRR36Q9H6K5 1346 aa27.18■■□□□ 1.94
CENPA-201ENST00000233505 SOCS7O14512 581 aa27.18■■□□□ 1.94
CENPA-201ENST00000233505 SLC24A1O60721 1099 aa27.17■■□□□ 1.94
CENPA-201ENST00000233505 USP32Q8NFA0 1604 aa27.16■■□□□ 1.94
CENPA-201ENST00000233505 ST20-MTHFSA0A0A6YYL1 179 aa27.15■■□□□ 1.94
CENPA-201ENST00000233505 TESK2Q96S53 571 aa27.15■■□□□ 1.94
CENPA-201ENST00000233505 PHF8Q9UPP1 1060 aa27.15■■□□□ 1.94
CENPA-201ENST00000233505 NHSL1Q5SYE7 1610 aa27.15■■□□□ 1.94
CENPA-201ENST00000233505 NPHP3Q7Z494 1330 aa27.15■■□□□ 1.94
CENPA-201ENST00000233505 KIF1AQ12756 1690 aa27.14■■□□□ 1.94
CENPA-201ENST00000233505 NUDT16Q96DE0 195 aaKnown RBP27.14■■□□□ 1.94
CENPA-201ENST00000233505 COL16A1Q07092 1604 aaPredicted RBP27.14■■□□□ 1.94
CENPA-201ENST00000233505 SRPK2P78362 688 aaKnown RBP27.12■■□□□ 1.93
CENPA-201ENST00000233505 CCDC61Q9Y6R9 512 aa27.12■■□□□ 1.93
CENPA-201ENST00000233505 SOS2Q07890 1332 aaPredicted RBP27.12■■□□□ 1.93
CENPA-201ENST00000233505 PUS7Q96PZ0 661 aaKnown RBP27.1■■□□□ 1.93
CENPA-201ENST00000233505 JCADQ9P266 1359 aa27.09■■□□□ 1.93
CENPA-201ENST00000233505 ATAD2Q6PL18 1390 aa27.09■■□□□ 1.93
CENPA-201ENST00000233505 CABP2Q9NPB3 220 aa27.08■■□□□ 1.93
CENPA-201ENST00000233505 RGS17Q9UGC6 210 aaPredicted RBP27.08■■□□□ 1.93
CENPA-201ENST00000233505 PXDNQ92626 1479 aa27.07■■□□□ 1.92
CENPA-201ENST00000233505 FOXO3O43524 673 aa27.07■■□□□ 1.92
CENPA-201ENST00000233505 TOPAZ1Q8N9V7 1692 aa27.06■■□□□ 1.92
CENPA-201ENST00000233505 PLEKHG3A1L390 1219 aa27.06■■□□□ 1.92
CENPA-201ENST00000233505 EIF4G2P78344 907 aaKnown RBP eCLIP27.06■■□□□ 1.92
CENPA-201ENST00000233505 DDX17Q92841 729 aaKnown RBP27.06■■□□□ 1.92
CENPA-201ENST00000233505 LRRC59Q96AG4 307 aaKnown RBP27.05■■□□□ 1.92
CENPA-201ENST00000233505 POLR3AO14802 1390 aaPredicted RBP27.05■■□□□ 1.92
CENPA-201ENST00000233505 ITSN1Q15811 1721 aa27.04■■□□□ 1.92
CENPA-201ENST00000233505 PPIP5K1Q6PFW1 1433 aa27.03■■□□□ 1.92
CENPA-201ENST00000233505 PMFBP1Q8TBY8 1022 aa27.03■■□□□ 1.92
CENPA-201ENST00000233505 TMF1P82094 1093 aa27.01■■□□□ 1.91
CENPA-201ENST00000233505 SBNO1A3KN83 1393 aa27■■□□□ 1.91
CENPA-201ENST00000233505 NGDNQ8NEJ9 315 aaKnown RBP27■■□□□ 1.91
CENPA-201ENST00000233505 RGPD8O14715 1765 aaPredicted RBP26.99■■□□□ 1.91
CENPA-201ENST00000233505 HSPA5P11021 654 aaKnown RBP26.99■■□□□ 1.91
CENPA-201ENST00000233505 PSME1Q06323 249 aa26.99■■□□□ 1.91
CENPA-201ENST00000233505 KRT28Q7Z3Y7 464 aa26.99■■□□□ 1.91
CENPA-201ENST00000233505 LRP6O75581 1613 aa26.98■■□□□ 1.91
CENPA-201ENST00000233505 ACEP12821 1306 aa26.97■■□□□ 1.91
CENPA-201ENST00000233505 CDCA8Q53HL2 280 aa26.97■■□□□ 1.91
CENPA-201ENST00000233505 CABP1Q9NZU7 370 aa26.97■■□□□ 1.91
CENPA-201ENST00000233505 PNPLA6Q8IY17 1366 aa26.97■■□□□ 1.91
CENPA-201ENST00000233505 NINLQ9Y2I6 1382 aa26.97■■□□□ 1.91
CENPA-201ENST00000233505 XPCQ01831 940 aaPredicted RBP26.96■■□□□ 1.91
CENPA-201ENST00000233505 BRD4O60885 1362 aaPredicted RBP26.96■■□□□ 1.91
CENPA-201ENST00000233505 SHPRHQ149N8 1683 aa26.95■■□□□ 1.91
CENPA-201ENST00000233505 SPATA31A6Q5VVP1 1343 aa26.95■■□□□ 1.91
CENPA-201ENST00000233505 SPATA31A3Q5VYP0 1347 aa26.95■■□□□ 1.91
CENPA-201ENST00000233505 TNS3Q68CZ2 1445 aa26.95■■□□□ 1.9
CENPA-201ENST00000233505 POTEAQ6S8J7 498 aa26.94■■□□□ 1.9
CENPA-201ENST00000233505 ARHGEF10O15013 1369 aa26.91■■□□□ 1.9
CENPA-201ENST00000233505 CPSF1Q10570 1443 aaKnown RBP26.9■■□□□ 1.9
CENPA-201ENST00000233505 NUTM2BA6NNL0 878 aaPredicted RBP26.9■■□□□ 1.9
CENPA-201ENST00000233505 NUTM2EB1AL46 878 aaPredicted RBP26.9■■□□□ 1.9
CENPA-201ENST00000233505 MEX3CQ5U5Q3 659 aaKnown RBP26.9■■□□□ 1.9
CENPA-201ENST00000233505 NUTM2AQ8IVF1 878 aaPredicted RBP26.9■■□□□ 1.9
CENPA-201ENST00000233505 ZEB1P37275 1124 aaPredicted RBP26.89■■□□□ 1.9
CENPA-201ENST00000233505 ZNF692Q9BU19 519 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms