RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 LRRC9Q6ZRR7 1453 aa16.2■□□□□ 0.18
NEK4-201ENST00000233027 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
NEK4-201ENST00000233027 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
NEK4-201ENST00000233027 TRDNQ13061 729 aa16.19■□□□□ 0.18
NEK4-201ENST00000233027 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
NEK4-201ENST00000233027 DDX58O95786 925 aaKnown RBP16.19■□□□□ 0.18
NEK4-201ENST00000233027 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
NEK4-201ENST00000233027 TEX35Q5T0J7 233 aa16.18■□□□□ 0.18
NEK4-201ENST00000233027 CCDC39Q9UFE4 941 aa16.18■□□□□ 0.18
NEK4-201ENST00000233027 CCDC73Q6ZRK6 1079 aa16.18■□□□□ 0.18
NEK4-201ENST00000233027 ERC2O15083 957 aa16.18■□□□□ 0.18
NEK4-201ENST00000233027 MTHFSP49914 203 aa16.18■□□□□ 0.18
NEK4-201ENST00000233027 IPO7O95373 1038 aaKnown RBP16.17■□□□□ 0.18
NEK4-201ENST00000233027 NUTM2GQ5VZR2 741 aa16.17■□□□□ 0.18
NEK4-201ENST00000233027 DHX16O60231 1041 aaKnown RBP16.17■□□□□ 0.18
NEK4-201ENST00000233027 ANKRD20A12PQ8NF67 263 aa16.17■□□□□ 0.18
NEK4-201ENST00000233027 NEUROD6Q96NK8 337 aa16.17■□□□□ 0.18
NEK4-201ENST00000233027 HOOK1Q9UJC3 728 aaKnown RBP16.17■□□□□ 0.18
NEK4-201ENST00000233027 BCAR3O75815 825 aa16.16■□□□□ 0.18
NEK4-201ENST00000233027 PPP2R1AP30153 589 aa16.16■□□□□ 0.18
NEK4-201ENST00000233027 SYTL4Q96C24 671 aaPredicted RBP16.16■□□□□ 0.18
NEK4-201ENST00000233027 TCP11L2Q8N4U5 519 aa16.16■□□□□ 0.18
NEK4-201ENST00000233027 FGD5Q6ZNL6 1462 aa16.16■□□□□ 0.18
NEK4-201ENST00000233027 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
NEK4-201ENST00000233027 PRPF40AO75400 957 aaKnown RBP16.16■□□□□ 0.18
NEK4-201ENST00000233027 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
NEK4-201ENST00000233027 MNS1Q8NEH6 495 aa16.16■□□□□ 0.18
NEK4-201ENST00000233027 MIA2Q96PC5 1412 aa16.16■□□□□ 0.18
NEK4-201ENST00000233027 IGF1RP08069 1367 aa16.15■□□□□ 0.18
NEK4-201ENST00000233027 PSME1Q06323 249 aa16.15■□□□□ 0.18
NEK4-201ENST00000233027 RIC3Q7Z5B4 369 aa16.15■□□□□ 0.18
NEK4-201ENST00000233027 VPS37DQ86XT2 251 aa16.15■□□□□ 0.18
NEK4-201ENST00000233027 AMOTL1Q8IY63 956 aa16.15■□□□□ 0.18
NEK4-201ENST00000233027 NOL10Q9BSC4 688 aaKnown RBP16.15■□□□□ 0.18
NEK4-201ENST00000233027 EXOSC9Q06265 439 aaKnown RBP16.15■□□□□ 0.18
NEK4-201ENST00000233027 ERICH2A1L162 156 aa16.14■□□□□ 0.17
NEK4-201ENST00000233027 PDILTQ8N807 584 aa16.14■□□□□ 0.17
NEK4-201ENST00000233027 CCDC47Q96A33 483 aaKnown RBP16.14■□□□□ 0.17
NEK4-201ENST00000233027 WASHC4Q2M389 1173 aa16.14■□□□□ 0.17
NEK4-201ENST00000233027 NCOA2Q15596 1464 aa16.14■□□□□ 0.17
NEK4-201ENST00000233027 HSP90AB4PQ58FF6 505 aa16.14■□□□□ 0.17
NEK4-201ENST00000233027 NOB1Q9ULX3 412 aaKnown RBP16.13■□□□□ 0.17
NEK4-201ENST00000233027 FYB1O15117 783 aa16.13■□□□□ 0.17
NEK4-201ENST00000233027 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
NEK4-201ENST00000233027 NAP1L1P55209 391 aaKnown RBP16.13■□□□□ 0.17
NEK4-201ENST00000233027 TSR2Q969E8 191 aaKnown RBP16.13■□□□□ 0.17
NEK4-201ENST00000233027 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.13■□□□□ 0.17
NEK4-201ENST00000233027 CNTROBQ8N137 903 aa16.13■□□□□ 0.17
NEK4-201ENST00000233027 ANKRD50Q9ULJ7 1429 aa16.13■□□□□ 0.17
NEK4-201ENST00000233027 NEK4P51957 841 aa16.12■□□□□ 0.17
NEK4-201ENST00000233027 RBM10P98175 930 aaKnown RBP16.12■□□□□ 0.17
NEK4-201ENST00000233027 AAMPQ13685 434 aa16.12■□□□□ 0.17
NEK4-201ENST00000233027 TSPY26PQ9H489 355 aa16.12■□□□□ 0.17
NEK4-201ENST00000233027 GAPVD1Q14C86 1478 aa16.12■□□□□ 0.17
NEK4-201ENST00000233027 FSD1Q9BTV5 496 aa16.11■□□□□ 0.17
NEK4-201ENST00000233027 TRIM34Q9BYJ4 488 aa16.11■□□□□ 0.17
NEK4-201ENST00000233027 TTLL5Q6EMB2 1281 aa16.11■□□□□ 0.17
NEK4-201ENST00000233027 TCEAL9Q9UHQ7 104 aa16.11■□□□□ 0.17
NEK4-201ENST00000233027 RALYLQ86SE5 291 aaKnown RBP16.11■□□□□ 0.17
NEK4-201ENST00000233027 MSH5O43196 834 aa16.1■□□□□ 0.17
NEK4-201ENST00000233027 ARGLU1Q9NWB6 273 aaPredicted RBP16.1■□□□□ 0.17
NEK4-201ENST00000233027 TRIM5Q9C035 493 aa16.1■□□□□ 0.17
NEK4-201ENST00000233027 SAFBQ15424 915 aaKnown RBP eCLIP16.1■□□□□ 0.17
NEK4-201ENST00000233027 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
NEK4-201ENST00000233027 OLFM4Q6UX06 510 aa16.09■□□□□ 0.17
NEK4-201ENST00000233027 SPC24Q8NBT2 197 aa16.09■□□□□ 0.17
NEK4-201ENST00000233027 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
NEK4-201ENST00000233027 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
NEK4-201ENST00000233027 ZNF428Q96B54 188 aa16.09■□□□□ 0.17
NEK4-201ENST00000233027 DNAJC2Q99543 621 aaKnown RBP16.09■□□□□ 0.17
NEK4-201ENST00000233027 SDF4Q9BRK5 362 aa16.09■□□□□ 0.17
NEK4-201ENST00000233027 MPNDQ8N594 471 aa16.09■□□□□ 0.17
NEK4-201ENST00000233027 PRKAR2BP31323 418 aa16.09■□□□□ 0.17
NEK4-201ENST00000233027 CEBPZQ03701 1054 aaKnown RBP16.08■□□□□ 0.17
NEK4-201ENST00000233027 CFAP70Q5T0N1 1121 aa16.08■□□□□ 0.17
NEK4-201ENST00000233027 RUFY1Q96T51 708 aa16.08■□□□□ 0.17
NEK4-201ENST00000233027 MTMR7Q9Y216 660 aa16.08■□□□□ 0.17
NEK4-201ENST00000233027 PSMA5P28066 241 aa16.08■□□□□ 0.17
NEK4-201ENST00000233027 BACH2Q9BYV9 841 aa16.08■□□□□ 0.16
NEK4-201ENST00000233027 NAT10Q9H0A0 1025 aaKnown RBP16.08■□□□□ 0.16
NEK4-201ENST00000233027 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.16
NEK4-201ENST00000233027 FIBPO43427 364 aa16.08■□□□□ 0.16
NEK4-201ENST00000233027 SMC2O95347 1197 aa16.08■□□□□ 0.16
NEK4-201ENST00000233027 MAP4K4O95819 1239 aaPredicted RBP16.07■□□□□ 0.16
NEK4-201ENST00000233027 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
NEK4-201ENST00000233027 CCDC173Q0VFZ6 552 aa16.06■□□□□ 0.16
NEK4-201ENST00000233027 TWISTNBQ3B726 338 aaPredicted RBP16.06■□□□□ 0.16
NEK4-201ENST00000233027 NBPF8Q3BBV2 869 aa16.06■□□□□ 0.16
NEK4-201ENST00000233027 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
NEK4-201ENST00000233027 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
NEK4-201ENST00000233027 AK7Q96M32 723 aa16.06■□□□□ 0.16
NEK4-201ENST00000233027 LETM1O95202 739 aaPredicted RBP16.05■□□□□ 0.16
NEK4-201ENST00000233027 RABEP1Q15276 862 aa16.05■□□□□ 0.16
NEK4-201ENST00000233027 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
NEK4-201ENST00000233027 CCDC30Q5VVM6 783 aa16.04■□□□□ 0.16
NEK4-201ENST00000233027 RAPGEF4Q8WZA2 1011 aa16.04■□□□□ 0.16
NEK4-201ENST00000233027 CTDP1Q9Y5B0 961 aaPredicted RBP16.04■□□□□ 0.16
NEK4-201ENST00000233027 CFTRP13569 1480 aa16.04■□□□□ 0.16
NEK4-201ENST00000233027 MBD3O95983 291 aa16.04■□□□□ 0.16
NEK4-201ENST00000233027 CLASRPQ8N2M8 674 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms