RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 CWC15Q9P013 229 aaKnown RBP16.75■□□□□ 0.27
HCFC2-201ENST00000229330 RABEP1Q15276 862 aa16.74■□□□□ 0.27
HCFC2-201ENST00000229330 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
HCFC2-201ENST00000229330 SNAPC4Q5SXM2 1469 aa16.73■□□□□ 0.27
HCFC2-201ENST00000229330 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
HCFC2-201ENST00000229330 FAM69CQ0P6D2 419 aa16.72■□□□□ 0.27
HCFC2-201ENST00000229330 CREBRFQ8IUR6 639 aa16.72■□□□□ 0.27
HCFC2-201ENST00000229330 EVC2Q86UK5 1308 aa16.72■□□□□ 0.27
HCFC2-201ENST00000229330 RUFY2Q8WXA3 655 aa16.72■□□□□ 0.27
HCFC2-201ENST00000229330 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
HCFC2-201ENST00000229330 BCAR3O75815 825 aa16.72■□□□□ 0.27
HCFC2-201ENST00000229330 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
HCFC2-201ENST00000229330 K7ELQ4 463 aaPredicted RBP16.71■□□□□ 0.27
HCFC2-201ENST00000229330 ARHGAP5Q13017 1502 aa16.71■□□□□ 0.27
HCFC2-201ENST00000229330 ROCK1Q13464 1354 aa16.71■□□□□ 0.27
HCFC2-201ENST00000229330 CSB-PGBD3P0DP91 1061 aa16.71■□□□□ 0.27
HCFC2-201ENST00000229330 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
HCFC2-201ENST00000229330 RIPK4P57078 832 aa16.7■□□□□ 0.26
HCFC2-201ENST00000229330 CCDC70Q6NSX1 233 aa16.7■□□□□ 0.26
HCFC2-201ENST00000229330 AFAP1Q8N556 730 aa16.7■□□□□ 0.26
HCFC2-201ENST00000229330 CWC22Q9HCG8 908 aaKnown RBP16.7■□□□□ 0.26
HCFC2-201ENST00000229330 TAF3Q5VWG9 929 aa16.7■□□□□ 0.26
HCFC2-201ENST00000229330 TPM1P09493 284 aa16.7■□□□□ 0.26
HCFC2-201ENST00000229330 EHBP1L1Q8N3D4 1523 aa16.69■□□□□ 0.26
HCFC2-201ENST00000229330 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
HCFC2-201ENST00000229330 TRIM5Q9C035 493 aa16.69■□□□□ 0.26
HCFC2-201ENST00000229330 PPP2R1AP30153 589 aa16.68■□□□□ 0.26
HCFC2-201ENST00000229330 C11orf95C9JLR9 678 aaPredicted RBP16.68■□□□□ 0.26
HCFC2-201ENST00000229330 ACBD3Q9H3P7 528 aa16.68■□□□□ 0.26
HCFC2-201ENST00000229330 TSR1Q2NL82 804 aaKnown RBP16.68■□□□□ 0.26
HCFC2-201ENST00000229330 NBPF8Q3BBV2 869 aa16.68■□□□□ 0.26
HCFC2-201ENST00000229330 TIAM1Q13009 1591 aa16.67■□□□□ 0.26
HCFC2-201ENST00000229330 NPHP1O15259 732 aa16.67■□□□□ 0.26
HCFC2-201ENST00000229330 MCM2P49736 904 aa16.67■□□□□ 0.26
HCFC2-201ENST00000229330 AMPHP49418 695 aa16.67■□□□□ 0.26
HCFC2-201ENST00000229330 HSP90B2PQ58FF3 399 aa16.67■□□□□ 0.26
HCFC2-201ENST00000229330 ABCA10Q8WWZ4 1543 aa16.66■□□□□ 0.26
HCFC2-201ENST00000229330 PRDM10Q9NQV6 1147 aa16.66■□□□□ 0.26
HCFC2-201ENST00000229330 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.65■□□□□ 0.26
HCFC2-201ENST00000229330 SKAP1Q86WV1 359 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
HCFC2-201ENST00000229330 NEK4P51957 841 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 CCDC73Q6ZRK6 1079 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 PDCL2Q8N4E4 241 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 SPC24Q8NBT2 197 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 CCDC112Q8NEF3 446 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 MPNDQ8N594 471 aa16.65■□□□□ 0.26
HCFC2-201ENST00000229330 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.64■□□□□ 0.25
HCFC2-201ENST00000229330 CLCN1P35523 988 aa16.64■□□□□ 0.25
HCFC2-201ENST00000229330 DIAPH1O60610 1272 aaKnown RBP16.64■□□□□ 0.25
HCFC2-201ENST00000229330 APPP05067 770 aa16.64■□□□□ 0.25
HCFC2-201ENST00000229330 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
HCFC2-201ENST00000229330 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
HCFC2-201ENST00000229330 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
HCFC2-201ENST00000229330 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
HCFC2-201ENST00000229330 LTV1Q96GA3 475 aaPredicted RBP16.63■□□□□ 0.25
HCFC2-201ENST00000229330 PES1O00541 588 aaKnown RBP16.63■□□□□ 0.25
HCFC2-201ENST00000229330 RASSF8Q8NHQ8 419 aa16.63■□□□□ 0.25
HCFC2-201ENST00000229330 NAT10Q9H0A0 1025 aaKnown RBP16.62■□□□□ 0.25
HCFC2-201ENST00000229330 LAMC3Q9Y6N6 1575 aa16.62■□□□□ 0.25
HCFC2-201ENST00000229330 RNF20Q5VTR2 975 aa16.62■□□□□ 0.25
HCFC2-201ENST00000229330 COG3Q96JB2 828 aa16.62■□□□□ 0.25
HCFC2-201ENST00000229330 FBXW7Q969H0 707 aa16.62■□□□□ 0.25
HCFC2-201ENST00000229330 CBX1P83916 185 aa16.61■□□□□ 0.25
HCFC2-201ENST00000229330 C9orf84Q5VXU9 1444 aa16.61■□□□□ 0.25
HCFC2-201ENST00000229330 CCDC27Q2M243 656 aa16.61■□□□□ 0.25
HCFC2-201ENST00000229330 GNAI1P63096 354 aa16.6■□□□□ 0.25
HCFC2-201ENST00000229330 KIAA0586Q9BVV6 1533 aa16.6■□□□□ 0.25
HCFC2-201ENST00000229330 TBC1D2Q9BYX2 928 aa16.6■□□□□ 0.25
HCFC2-201ENST00000229330 XPCQ01831 940 aaPredicted RBP16.59■□□□□ 0.25
HCFC2-201ENST00000229330 LEKR1Q6ZMV7 388 aa16.59■□□□□ 0.25
HCFC2-201ENST00000229330 HFM1A2PYH4 1435 aa16.59■□□□□ 0.25
HCFC2-201ENST00000229330 AK7Q96M32 723 aa16.59■□□□□ 0.25
HCFC2-201ENST00000229330 FIBPO43427 364 aa16.59■□□□□ 0.25
HCFC2-201ENST00000229330 CCDC192P0DO97 292 aa16.59■□□□□ 0.25
HCFC2-201ENST00000229330 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.25
HCFC2-201ENST00000229330 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.25
HCFC2-201ENST00000229330 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.25
HCFC2-201ENST00000229330 IPO7O95373 1038 aaKnown RBP16.58■□□□□ 0.24
HCFC2-201ENST00000229330 C20orf194Q5TEA3 1177 aa16.57■□□□□ 0.24
HCFC2-201ENST00000229330 CCP110O43303 1012 aa16.57■□□□□ 0.24
HCFC2-201ENST00000229330 EXOSC9Q06265 439 aaKnown RBP16.57■□□□□ 0.24
HCFC2-201ENST00000229330 WDR33Q9C0J8 1336 aaKnown RBP16.57■□□□□ 0.24
HCFC2-201ENST00000229330 HOOK1Q9UJC3 728 aaKnown RBP16.57■□□□□ 0.24
HCFC2-201ENST00000229330 ZNF330Q9Y3S2 320 aaPredicted RBP16.57■□□□□ 0.24
HCFC2-201ENST00000229330 SYCE3A1L190 88 aa16.56■□□□□ 0.24
HCFC2-201ENST00000229330 ERCC4Q92889 916 aaPredicted RBP16.56■□□□□ 0.24
HCFC2-201ENST00000229330 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
HCFC2-201ENST00000229330 RUFY1Q96T51 708 aa16.56■□□□□ 0.24
HCFC2-201ENST00000229330 ZHX1Q9UKY1 873 aaPredicted RBP16.56■□□□□ 0.24
HCFC2-201ENST00000229330 CDK13Q14004 1512 aaKnown RBP16.56■□□□□ 0.24
HCFC2-201ENST00000229330 SLFN5Q08AF3 891 aa16.55■□□□□ 0.24
HCFC2-201ENST00000229330 EPRSP07814 1512 aaKnown RBP16.55■□□□□ 0.24
HCFC2-201ENST00000229330 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
HCFC2-201ENST00000229330 CHD1LQ86WJ1 897 aa16.55■□□□□ 0.24
HCFC2-201ENST00000229330 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
HCFC2-201ENST00000229330 SUPT6HQ7KZ85 1726 aaKnown RBP16.55■□□□□ 0.24
HCFC2-201ENST00000229330 SDF4Q9BRK5 362 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms