RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 RALBP1Q15311 655 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 RNF20Q5VTR2 975 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 MAGEC2Q9UBF1 373 aaPredicted RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 RALYLQ86SE5 291 aaKnown RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 RAPGEF4Q8WZA2 1011 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 CLEC11AQ9Y240 323 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 LPXNO60711 386 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 CCDC150Q8NCX0 1101 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 CCDC117Q8IWD4 279 aaPredicted RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 TBC1D2BQ9UPU7 963 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 TEX35Q5T0J7 233 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 G3BP1Q13283 466 aaKnown RBP eCLIP4.14□□□□□ -1.75
NEB-201ENST00000172853 BAZ1BQ9UIG0 1483 aaKnown RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 MRPS9P82933 396 aaKnown RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 PDILTQ8N807 584 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 PIBF1Q8WXW3 757 aa4.14□□□□□ -1.75
NEB-201ENST00000172853 LUC7LQ9NQ29 371 aaKnown RBP4.14□□□□□ -1.75
NEB-201ENST00000172853 CETN2P41208 172 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 ATP2B2Q01814 1243 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 OLFM4Q6UX06 510 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 ZKSCAN1P17029 563 aaPredicted RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 SOGA3Q5TF21 947 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 TRIM22Q8IYM9 498 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 BRPF3Q9ULD4 1205 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 PIP4K2AP48426 406 aaPredicted RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 BBXQ8WY36 941 aaPredicted RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 ANKRD18BA2A2Z9 1011 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 NOM1Q5C9Z4 860 aaKnown RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 CCNB3Q8WWL7 1395 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 VTI1AQ96AJ9 217 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 NF2P35240 595 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 RBM10P98175 930 aaKnown RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 RABEP1Q15276 862 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 CCDC91Q7Z6B0 441 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 HMGB3O15347 200 aaKnown RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 PDS5BQ9NTI5 1447 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 IFIT2P09913 472 aaKnown RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 COG3Q96JB2 828 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 ZWINTO95229 277 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 VIMP08670 466 aaKnown RBP4.13□□□□□ -1.75
NEB-201ENST00000172853 CARMIL2Q6F5E8 1435 aa4.13□□□□□ -1.75
NEB-201ENST00000172853 BMP2KQ9NSY1 1161 aaPredicted RBP4.12□□□□□ -1.75
NEB-201ENST00000172853 ZNF76P36508 570 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 WDR78Q5VTH9 848 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 FERMT1Q9BQL6 677 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 CCDC82Q8N4S0 544 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 FERP16591 822 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 CCDC175P0C221 793 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 CHMP4BP1P59074 171 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 CCDC181Q5TID7 509 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 RILPL2Q969X0 211 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 CFAP57Q96MR6 1250 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 KIF4AO95239 1232 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 RIC3Q7Z5B4 369 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 SMARCE1Q969G3 411 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 WASHC2CQ9Y4E1 1318 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 ENOX2Q16206 610 aaKnown RBP4.12□□□□□ -1.75
NEB-201ENST00000172853 GTPBP4Q9BZE4 634 aaKnown RBP4.12□□□□□ -1.75
NEB-201ENST00000172853 EHMT1Q9H9B1 1298 aa4.12□□□□□ -1.75
NEB-201ENST00000172853 ARGLU1Q9NWB6 273 aaPredicted RBP4.12□□□□□ -1.75
NEB-201ENST00000172853 WASHC4Q2M389 1173 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 EFCAB2Q5VUJ9 269 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 NOL8Q76FK4 1167 aaKnown RBP4.11□□□□□ -1.75
NEB-201ENST00000172853 DCAF11Q8TEB1 546 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 BIN2Q9UBW5 565 aaPredicted RBP4.11□□□□□ -1.75
NEB-201ENST00000172853 GOLGA6L7A0A1B0GV03 622 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 EIF3JO75822 258 aaKnown RBP4.11□□□□□ -1.75
NEB-201ENST00000172853 MTMR7Q9Y216 660 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 SPATA24Q86W54 205 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 DMRT2Q9Y5R5 561 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 INCENPQ9NQS7 918 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 RIOK3O14730 519 aaKnown RBP4.11□□□□□ -1.75
NEB-201ENST00000172853 CCDC146Q8IYE0 955 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 PLIN1O60240 522 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 TAF12Q16514 161 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 RBM42Q9BTD8 480 aaKnown RBP4.11□□□□□ -1.75
NEB-201ENST00000172853 FILIP1LQ4L180 1135 aa4.11□□□□□ -1.75
NEB-201ENST00000172853 BMS1Q14692 1282 aaKnown RBP4.1□□□□□ -1.75
NEB-201ENST00000172853 JAKMIP3Q5VZ66 844 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 B4GALNT3Q6L9W6 998 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 CLASRPQ8N2M8 674 aaKnown RBP4.1□□□□□ -1.75
NEB-201ENST00000172853 RBM27Q9P2N5 1060 aaKnown RBP4.1□□□□□ -1.75
NEB-201ENST00000172853 SPATA32Q96LK8 384 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 PRC1O43663 620 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 ZHX3Q9H4I2 956 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 NUTM2FA1L443 756 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 XPCQ01831 940 aaPredicted RBP4.1□□□□□ -1.75
NEB-201ENST00000172853 DCAF1Q9Y4B6 1507 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 SMC2O95347 1197 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 CECR2Q9BXF3 1484 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 GRM1Q13255 1194 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 RAB3IL1Q8TBN0 382 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 CPLX3Q8WVH0 158 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 FHAD1B1AJZ9 1412 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 EIF2S2P20042 333 aaKnown RBP4.1□□□□□ -1.75
NEB-201ENST00000172853 ZSCAN25Q6NSZ9 544 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 NACADO15069 1562 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 ZCCHC6Q5VYS8 1495 aaKnown RBP4.1□□□□□ -1.75
NEB-201ENST00000172853 STIM1Q13586 685 aa4.1□□□□□ -1.75
NEB-201ENST00000172853 TSNARE1Q96NA8 513 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 1343 ms