RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 PLEKHH1Q9ULM0 1364 aa36.38■■■■□ 3.41
TSR3-201ENST00000007390 ADGRB1O14514 1584 aa36.36■■■■□ 3.41
TSR3-201ENST00000007390 SHPRHQ149N8 1683 aa36.36■■■■□ 3.41
TSR3-201ENST00000007390 SPATA31A6Q5VVP1 1343 aa36.35■■■■□ 3.41
TSR3-201ENST00000007390 KDM2AQ9Y2K7 1162 aa36.35■■■■□ 3.41
TSR3-201ENST00000007390 DLC1Q96QB1 1528 aa36.32■■■■□ 3.4
TSR3-201ENST00000007390 SOCS7O14512 581 aa36.31■■■■□ 3.4
TSR3-201ENST00000007390 ORAI2Q96SN7 254 aa36.31■■■■□ 3.4
TSR3-201ENST00000007390 RGS17Q9UGC6 210 aaPredicted RBP36.29■■■■□ 3.4
TSR3-201ENST00000007390 LRRC59Q96AG4 307 aaKnown RBP36.28■■■■□ 3.4
TSR3-201ENST00000007390 DDX17Q92841 729 aaKnown RBP36.27■■■■□ 3.4
TSR3-201ENST00000007390 LRP6O75581 1613 aa36.26■■■■□ 3.39
TSR3-201ENST00000007390 PRAM1Q96QH2 718 aa36.24■■■■□ 3.39
TSR3-201ENST00000007390 FMN2Q9NZ56 1722 aa36.23■■■■□ 3.39
TSR3-201ENST00000007390 SOS2Q07890 1332 aaPredicted RBP36.22■■■■□ 3.39
TSR3-201ENST00000007390 ESCO1Q5FWF5 840 aa36.2■■■■□ 3.39
TSR3-201ENST00000007390 PNPLA6Q8IY17 1366 aa36.18■■■■□ 3.38
TSR3-201ENST00000007390 POGKQ9P215 609 aa36.17■■■■□ 3.38
TSR3-201ENST00000007390 NPHP3Q7Z494 1330 aa36.16■■■■□ 3.38
TSR3-201ENST00000007390 TRAK1Q9UPV9 953 aa36.16■■■■□ 3.38
TSR3-201ENST00000007390 ADGRB2O60241 1585 aa36.15■■■■□ 3.38
TSR3-201ENST00000007390 NUTM2FA1L443 756 aa36.13■■■■□ 3.37
TSR3-201ENST00000007390 SAFB2Q14151 953 aaKnown RBP eCLIP36.13■■■■□ 3.37
TSR3-201ENST00000007390 KIAA1210Q9ULL0 1709 aa36.13■■■■□ 3.37
TSR3-201ENST00000007390 PXDNQ92626 1479 aa36.11■■■■□ 3.37
TSR3-201ENST00000007390 MEX3CQ5U5Q3 659 aaKnown RBP36.11■■■■□ 3.37
TSR3-201ENST00000007390 POTEAQ6S8J7 498 aa36.1■■■■□ 3.37
TSR3-201ENST00000007390 KIF1AQ12756 1690 aa36.1■■■■□ 3.37
TSR3-201ENST00000007390 TRIM26Q12899 539 aaPredicted RBP36.09■■■■□ 3.37
TSR3-201ENST00000007390 NUTM2BA6NNL0 878 aaPredicted RBP36.08■■■■□ 3.37
TSR3-201ENST00000007390 NUTM2EB1AL46 878 aaPredicted RBP36.08■■■■□ 3.37
TSR3-201ENST00000007390 NUTM2AQ8IVF1 878 aaPredicted RBP36.08■■■■□ 3.37
TSR3-201ENST00000007390 FOXO3O43524 673 aa36.07■■■■□ 3.36
TSR3-201ENST00000007390 ANKARQ7Z5J8 1434 aa36.06■■■■□ 3.36
TSR3-201ENST00000007390 ARHGEF28Q8N1W1 1705 aaKnown RBP36.05■■■■□ 3.36
TSR3-201ENST00000007390 SIN3AQ96ST3 1273 aa36.03■■■■□ 3.36
TSR3-201ENST00000007390 COL22A1Q8NFW1 1626 aaPredicted RBP36.02■■■■□ 3.36
TSR3-201ENST00000007390 L3MBTL2Q969R5 705 aa36.01■■■■□ 3.36
TSR3-201ENST00000007390 MINK1Q8N4C8 1332 aaPredicted RBP36■■■■□ 3.35
TSR3-201ENST00000007390 EIF3AQ14152 1382 aaKnown RBP36■■■■□ 3.35
TSR3-201ENST00000007390 USP32Q8NFA0 1604 aa35.99■■■■□ 3.35
TSR3-201ENST00000007390 ZNF772Q68DY9 489 aaPredicted RBP35.99■■■■□ 3.35
TSR3-201ENST00000007390 PHF8Q9UPP1 1060 aa35.99■■■■□ 3.35
TSR3-201ENST00000007390 RGPD8O14715 1765 aaPredicted RBP35.98■■■■□ 3.35
TSR3-201ENST00000007390 XPCQ01831 940 aaPredicted RBP35.98■■■■□ 3.35
TSR3-201ENST00000007390 HIRIP3Q9BW71 556 aaPredicted RBP35.98■■■■□ 3.35
TSR3-201ENST00000007390 NBPF1Q3BBV0 1214 aa35.96■■■■□ 3.35
TSR3-201ENST00000007390 TULP4Q9NRJ4 1543 aa35.95■■■■□ 3.35
TSR3-201ENST00000007390 WASLO00401 505 aaPredicted RBP35.95■■■■□ 3.35
TSR3-201ENST00000007390 NEUROD1Q13562 356 aa35.93■■■■□ 3.34
TSR3-201ENST00000007390 AFF2P51816 1311 aa35.91■■■■□ 3.34
TSR3-201ENST00000007390 SPATA31A3Q5VYP0 1347 aa35.91■■■■□ 3.34
TSR3-201ENST00000007390 KRT28Q7Z3Y7 464 aa35.91■■■■□ 3.34
TSR3-201ENST00000007390 PRR36Q9H6K5 1346 aa35.9■■■■□ 3.34
TSR3-201ENST00000007390 C8orf37Q96NL8 207 aa35.89■■■■□ 3.34
TSR3-201ENST00000007390 ADAMTS2O95450 1211 aa35.87■■■■□ 3.33
TSR3-201ENST00000007390 PSME1Q06323 249 aa35.86■■■■□ 3.33
TSR3-201ENST00000007390 SBNO1A3KN83 1393 aa35.86■■■■□ 3.33
TSR3-201ENST00000007390 TNS3Q68CZ2 1445 aa35.84■■■■□ 3.33
TSR3-201ENST00000007390 TRPM1Q7Z4N2 1603 aa35.83■■■■□ 3.33
TSR3-201ENST00000007390 PMFBP1Q8TBY8 1022 aa35.83■■■■□ 3.33
TSR3-201ENST00000007390 ATP7BP35670 1465 aa35.83■■■■□ 3.33
TSR3-201ENST00000007390 NGLY1Q96IV0 654 aa35.81■■■■□ 3.32
TSR3-201ENST00000007390 CENPJQ9HC77 1338 aaPredicted RBP35.79■■■■□ 3.32
TSR3-201ENST00000007390 CDK19Q9BWU1 502 aa35.77■■■■□ 3.32
TSR3-201ENST00000007390 ITSN1Q15811 1721 aa35.77■■■■□ 3.32
TSR3-201ENST00000007390 ARHGEF10O15013 1369 aa35.76■■■■□ 3.32
TSR3-201ENST00000007390 FNBP4Q8N3X1 1017 aaPredicted RBP35.76■■■■□ 3.32
TSR3-201ENST00000007390 NUDT16Q96DE0 195 aaKnown RBP35.76■■■■□ 3.32
TSR3-201ENST00000007390 RXRBP28702 533 aa35.75■■■■□ 3.31
TSR3-201ENST00000007390 GPRASP1Q5JY77 1395 aa35.75■■■■□ 3.31
TSR3-201ENST00000007390 TRPM3Q9HCF6 1732 aaPredicted RBP35.74■■■■□ 3.31
TSR3-201ENST00000007390 CDK12Q9NYV4 1490 aaPredicted RBP35.73■■■■□ 3.31
TSR3-201ENST00000007390 MARF1Q9Y4F3 1742 aaKnown RBP35.73■■■■□ 3.31
TSR3-201ENST00000007390 ROCK2O75116 1388 aaKnown RBP35.73■■■■□ 3.31
TSR3-201ENST00000007390 QTRT2Q9H974 415 aaKnown RBP35.71■■■■□ 3.31
TSR3-201ENST00000007390 TOPAZ1Q8N9V7 1692 aa35.7■■■■□ 3.31
TSR3-201ENST00000007390 NGDNQ8NEJ9 315 aaKnown RBP35.7■■■■□ 3.31
TSR3-201ENST00000007390 QRICH2Q9H0J4 1663 aa35.69■■■■□ 3.3
TSR3-201ENST00000007390 TONSLQ96HA7 1378 aa35.69■■■■□ 3.3
TSR3-201ENST00000007390 NBPF8Q3BBV2 869 aa35.69■■■■□ 3.3
TSR3-201ENST00000007390 USP21Q9UK80 565 aa35.69■■■■□ 3.3
TSR3-201ENST00000007390 CCDC61Q9Y6R9 512 aa35.68■■■■□ 3.3
TSR3-201ENST00000007390 ALS2Q96Q42 1657 aa35.66■■■■□ 3.3
TSR3-201ENST00000007390 RBM6P78332 1123 aaKnown RBP35.66■■■■□ 3.3
TSR3-201ENST00000007390 LMOD2Q6P5Q4 547 aa35.65■■■■□ 3.3
TSR3-201ENST00000007390 POLR3AO14802 1390 aaPredicted RBP35.64■■■■□ 3.3
TSR3-201ENST00000007390 ABCA3Q99758 1704 aa35.63■■■■□ 3.29
TSR3-201ENST00000007390 BCL9LQ86UU0 1499 aa35.63■■■■□ 3.29
TSR3-201ENST00000007390 TRPC5Q9UL62 973 aaPredicted RBP35.63■■■■□ 3.29
TSR3-201ENST00000007390 ATRNO75882 1429 aa35.63■■■■□ 3.29
TSR3-201ENST00000007390 PLEKHG3A1L390 1219 aa35.62■■■■□ 3.29
TSR3-201ENST00000007390 CABLES1Q8TDN4 633 aa35.61■■■■□ 3.29
TSR3-201ENST00000007390 HAP1P54257 671 aaPredicted RBP35.6■■■■□ 3.29
TSR3-201ENST00000007390 SRPK2P78362 688 aaKnown RBP35.6■■■■□ 3.29
TSR3-201ENST00000007390 SLIT2O94813 1529 aa35.6■■■■□ 3.29
TSR3-201ENST00000007390 RALGAPBQ86X10 1494 aa35.59■■■■□ 3.29
TSR3-201ENST00000007390 ACEP12821 1306 aa35.57■■■■□ 3.29
TSR3-201ENST00000007390 RGS12O14924 1447 aa35.57■■■■□ 3.29
TSR3-201ENST00000007390 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.56■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms