RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Arid3cA6PWV5 409 aa18.57■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Zhx1P70121 873 aa18.57■□□□□ 0.56
Ebf3-208ENSMUST00000210774 MpndQ3TV65 487 aa18.57■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Pank2Q3U4S0 443 aa18.56■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Il16O54824 1322 aa18.56■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Col17a1Q07563 1470 aa18.56■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Rangap1P46061 589 aaKnown RBP18.55■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Mbd5B1AYB6 1498 aa18.54■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Fam13bQ8K2H3 851 aa18.54■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Fmn2Q9JL04 1578 aa18.54■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Ush1cQ9ES64 910 aa18.53■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Ttc41Q692V3 1318 aa18.53■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Kiaa0556Q8C753 1610 aa18.52■□□□□ 0.56
Ebf3-208ENSMUST00000210774 PrxO55103 1391 aa18.52■□□□□ 0.56
Ebf3-208ENSMUST00000210774 PtmaP26350 111 aa18.52■□□□□ 0.56
Ebf3-208ENSMUST00000210774 Gzf1Q4VBD9 706 aa18.51■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Kif2cQ922S8 721 aa18.51■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Ylpm1Q9R0I7 1386 aaKnown RBP18.51■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Zscan10Q3URR7 782 aa18.51■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Atp10dQ8K2X1 1416 aa18.51■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Ppp2r1aQ76MZ3 589 aa18.5■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Adgrl2Q8JZZ7 1487 aa18.5■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Kdm3bQ6ZPY7 1562 aa18.5■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Trappc8E9PWG2 1437 aa18.5■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Zmym3Q9JLM4 1370 aa18.5■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Clasp1Q80TV8 1535 aaKnown RBP18.49■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Lamc1P02468 1607 aaKnown RBP18.49■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Adgrl3Q80TS3 1537 aa18.49■□□□□ 0.55
Ebf3-208ENSMUST00000210774 AlkP97793 1621 aa18.49■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Zfyve16Q80U44 1528 aa18.49■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Cbx1P83917 185 aaKnown RBP18.48■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Map3k5O35099 1380 aa18.47■□□□□ 0.55
Ebf3-208ENSMUST00000210774 AglF8VPN4 1532 aa18.46■□□□□ 0.55
Ebf3-208ENSMUST00000210774 RalgapbQ8BQZ4 1484 aa18.46■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Nlrp6Q91WS2 869 aa18.46■□□□□ 0.55
Ebf3-208ENSMUST00000210774 Becn1O88597 448 aa18.45■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Tmem132aQ922P8 1018 aa18.45■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Chmp4bQ9D8B3 224 aaKnown RBP18.45■□□□□ 0.54
Ebf3-208ENSMUST00000210774 CatipB9EKE5 520 aa18.44■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Isy1Q69ZQ2 285 aaKnown RBP18.44■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Kdm2aP59997 1161 aa18.44■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Kidins220E9Q9B7 1793 aa18.43■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Slc4a1apE9PX68 744 aa18.43■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Rsph3aQ3UFY4 516 aa18.43■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Abca9Q8K449 1623 aa18.42■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Ifit1bl1D3Z6F0 470 aa18.42■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Atxn3Q9CVD2 355 aa18.42■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Tshz2Q68FE9 1030 aa18.42■□□□□ 0.54
Ebf3-208ENSMUST00000210774 GorabQ8BRM2 368 aa18.42■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Pnma3Q8JZW8 466 aa18.42■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Stk11ipQ3TAA7 1072 aa18.41■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Kiaa0753Q6A000 959 aa18.41■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Ppp1r3fQ9JIG4 799 aa18.41■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Aplp1Q03157 653 aa18.41■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Trim58Q5NCC9 485 aa18.4■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Tmx3Q8BXZ1 456 aa18.4■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Q4VA45 678 aa18.4■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Stac3Q8BZ71 360 aa18.4■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Arhgap5P97393 1501 aa18.4■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Trpm2Q91YD4 1506 aa18.4■□□□□ 0.54
Ebf3-208ENSMUST00000210774 Abca17E9PX95 1733 aa18.39■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Rbm27Q5SFM8 1060 aaKnown RBP18.39■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Os9Q8K2C7 672 aa18.38■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Tex14Q7M6U3 1450 aa18.38■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Tmf1B9EKI3 1091 aa18.38■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Rnf214Q8BFU3 668 aaKnown RBP18.37■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Tfip11Q9ERA6 838 aaKnown RBP18.37■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Supt6hQ62383 1726 aaKnown RBP18.37■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Fez1Q8K0X8 392 aa18.36■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Ccdc94Q9D6J3 314 aa18.36■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Ttc37F8VPK0 1563 aa18.36■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Cog6Q8R3I3 657 aa18.36■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Bloc1s4Q8VED2 215 aa18.36■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Golga2Q921M4 999 aa18.36■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Cdc42bpbQ7TT50 1713 aa18.35■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Sall3Q62255 1320 aa18.35■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Kank4Q6P9J5 1016 aa18.35■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Pdcl2Q78Y63 240 aa18.35■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Kdm5cP41230 1554 aa18.35■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Znf521Q6KAS7 1311 aa18.35■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Plch2A2AP18 1501 aa18.35■□□□□ 0.53
Ebf3-208ENSMUST00000210774 MsnP26041 577 aaKnown RBP18.34■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Ssh2Q5SW75 1423 aa18.34■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Znf608Q56A10 1511 aa18.33■□□□□ 0.53
Ebf3-208ENSMUST00000210774 AU019823E9PUQ3 292 aa18.33■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Gm156Q58A37 223 aa18.33■□□□□ 0.53
Ebf3-208ENSMUST00000210774 Serpina10Q8R121 448 aa18.33■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Usp19Q3UJD6 1360 aa18.33■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Znf330Q922H9 316 aa18.33■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Phlpp2Q8BXA7 1320 aa18.32■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Atp2b3Q0VF55 1220 aa18.32■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Bag4Q8CI61 457 aa18.31■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Kif18aQ91WD7 886 aa18.31■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Rab3gap2Q8BMG7 1366 aa18.31■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Stk24Q99KH8 431 aa18.3■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Spag9Q58A65 1321 aaKnown RBP18.3■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Chmp4cQ9D7F7 232 aa18.3■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Kif3bQ61771 747 aa18.29■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Gtpbp6Q3U6U5 514 aa18.28■□□□□ 0.52
Ebf3-208ENSMUST00000210774 Atp10aO54827 1508 aa18.28■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms