RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Mre11Q61216 706 aa15.05■□□□□ -0
Col6a3-208ENSMUST00000188587 Kcnn1Q9EQR3 537 aa15.05■□□□□ -0
Col6a3-208ENSMUST00000188587 Sycp2Q9CUU3 1500 aa15.04■□□□□ -0
Col6a3-208ENSMUST00000188587 Usp48Q3V0C5 1052 aa15.04■□□□□ -0
Col6a3-208ENSMUST00000188587 Ccdc96Q9CR92 584 aa15.04■□□□□ -0
Col6a3-208ENSMUST00000188587 Mphosph10Q810V0 681 aaKnown RBP15.04■□□□□ -0
Col6a3-208ENSMUST00000188587 PnisrA2AJT4 805 aaKnown RBP15.03■□□□□ -0
Col6a3-208ENSMUST00000188587 FanciQ8K368 1330 aa15.03■□□□□ -0
Col6a3-208ENSMUST00000188587 Gnai1B2RSH2 354 aa15.03■□□□□ -0
Col6a3-208ENSMUST00000188587 Bcl2l13P59017 434 aa15.03■□□□□ -0
Col6a3-208ENSMUST00000188587 Gnai3Q9DC51 354 aa15.03■□□□□ -0
Col6a3-208ENSMUST00000188587 Anp32eP97822 260 aaKnown RBP15.03■□□□□ -0
Col6a3-208ENSMUST00000188587 Trim58Q5NCC9 485 aa15.03■□□□□ -0
Col6a3-208ENSMUST00000188587 Kif16bB1AVY7 1312 aa15.02■□□□□ -0
Col6a3-208ENSMUST00000188587 Rbm28Q8CGC6 750 aaKnown RBP15.02■□□□□ -0
Col6a3-208ENSMUST00000188587 Ubxn4Q8VCH8 506 aa15.02■□□□□ -0
Col6a3-208ENSMUST00000188587 Cfap99A0A140LIX9 648 aa15.02■□□□□ -0
Col6a3-208ENSMUST00000188587 TefQ9JLC6 301 aa15.02□□□□□ -0.01
Col6a3-208ENSMUST00000188587 NaspQ99MD9 773 aaKnown RBP15.02□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Kif3cO35066 796 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 AampJ3QN89 436 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Dctn1O08788 1281 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Mical3Q8CJ19 1993 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Gm10471E9Q1C7 252 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Prl7d1P04769 244 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Agtpbp1Q641K1 1218 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 TatQ8QZR1 454 aa15.01□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Washc4Q3UMB9 1173 aa15□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Swt1Q9DBQ9 907 aa15□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Smarca2Q6DIC0 1577 aa15□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Odf2lQ9D478 642 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Q9D2X8 372 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Rabep1O35551 862 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Fbxo2Q80UW2 297 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Pnmal2G3X9N3 661 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Stk3Q9JI10 497 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Pdcl3Q8BVF2 240 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Ipo4Q8VI75 1082 aa14.99□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Ehmt1Q5DW34 1296 aa14.98□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Zranb3Q6NZP1 1069 aa14.98□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Ripply1Q2WG77 201 aa14.97□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Sel1lQ9Z2G6 790 aa14.97□□□□□ -0.01
Col6a3-208ENSMUST00000188587 MycnP03966 462 aaKnown RBP14.97□□□□□ -0.01
Col6a3-208ENSMUST00000188587 EzrP26040 586 aaKnown RBP14.97□□□□□ -0.01
Col6a3-208ENSMUST00000188587 OptnQ8K3K8 584 aa14.97□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Cyp46a1Q9WVK8 500 aa14.97□□□□□ -0.01
Col6a3-208ENSMUST00000188587 TbcaP48428 108 aaKnown RBP14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Fbln2P37889 1221 aa14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Zscan10Q3URR7 782 aa14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Rad54l2Q99NG0 1466 aa14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Nectin2P32507 530 aa14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Esx1O88933 382 aa14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Erc1Q99MI1 1120 aa14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Iqgap2Q3UQ44 1575 aa14.96□□□□□ -0.01
Col6a3-208ENSMUST00000188587 Kcnh8P59111 1102 aa14.95□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Kiaa0753Q6A000 959 aa14.95□□□□□ -0.02
Col6a3-208ENSMUST00000188587 PogkQ80TC5 607 aa14.95□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Rbm25B2RY56 838 aaKnown RBP14.95□□□□□ -0.02
Col6a3-208ENSMUST00000188587 SelenooQ9DBC0 667 aa14.95□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Nsd2Q8BVE8 1365 aa14.94□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Mns1Q61884 491 aa14.94□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Atl3Q91YH5 541 aa14.94□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ak7Q9D2H2 614 aa14.94□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Erlin2Q8BFZ9 340 aa14.94□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Cnnm1Q0GA42 951 aa14.94□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Evi5lH3BKQ3 813 aa14.93□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ncbp1Q3UYV9 790 aaKnown RBP14.93□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Mapk8ip1Q9WVI9 707 aa14.93□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Lrrc45Q8CIM1 670 aa14.93□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ints3Q7TPD0 1041 aaKnown RBP14.93□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Rsph6aQ8CDR2 708 aa14.93□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Nutm1Q8BHP2 1126 aa14.92□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ell2Q3UKU1 639 aa14.92□□□□□ -0.02
Col6a3-208ENSMUST00000188587 CftrP26361 1476 aa14.92□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ccdc173A0JLY1 547 aa14.92□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Fmnl2A2APV2 1086 aa14.92□□□□□ -0.02
Col6a3-208ENSMUST00000188587 HypkQ9CR41 129 aa14.91□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Stim1P70302 685 aa14.91□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ddx54Q8K4L0 874 aaKnown RBP14.91□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Luc7lQ9CYI4 371 aaKnown RBP14.91□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Plekhd1B2RPU2 505 aa14.91□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Cep112Q5PR68 954 aa14.91□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ccdc30Q8BVF4 654 aa14.91□□□□□ -0.02
Col6a3-208ENSMUST00000188587 LrpprcQ6PB66 1392 aaKnown RBP14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Cwc15Q9JHS9 229 aaKnown RBP14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Nol12Q8BG17 217 aa14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 AnlnQ8K298 1121 aaKnown RBP14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Ccdc171E9Q1U1 1324 aa14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Tdrd9Q14BI7 1383 aa14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Trim34bJ3QNR8 485 aa14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Kcnj4P52189 445 aa14.9□□□□□ -0.02
Col6a3-208ENSMUST00000188587 Gm21698A0A087WQP8 267 aa14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Gm21671G3UY31 267 aa14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Nap1l2P51860 460 aa14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Stard3nlQ9DCI3 235 aa14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Kif21aQ9QXL2 1672 aa14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Dhx29Q6PGC1 1365 aaKnown RBP14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Eif3aP23116 1344 aaKnown RBP14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Erich4Q3UNU4 136 aa14.89□□□□□ -0.03
Col6a3-208ENSMUST00000188587 KarsQ99MN1 595 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms