RNA–Protein interactions for RNA: ENSMUST00000087557.11

Tspan6-201, Transcript of Tetraspanin-6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tspan6, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6-201ENSMUST00000087557 Ofd1Q80Z25 1017 aa12.31□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Map4P27546 1125 aaKnown RBP12.3□□□□□ -0.44
Tspan6-201ENSMUST00000087557 CltcQ68FD5 1675 aaKnown RBP12.3□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Plch2A2AP18 1501 aa12.3□□□□□ -0.44
Tspan6-201ENSMUST00000087557 PtprgQ05909 1442 aa12.29□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Ssh2Q5SW75 1423 aa12.29□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Apba2P98084 750 aa12.28□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Tcerg1Q8CGF7 1100 aaKnown RBP12.28□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Rundc1Q0VDN7 615 aa12.28□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Pak3Q61036 559 aa12.28□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Card11Q8CIS0 1159 aa12.28□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Clstn2Q9ER65 966 aa12.28□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Iqgap1Q9JKF1 1657 aaKnown RBP12.28□□□□□ -0.44
Tspan6-201ENSMUST00000087557 Kank1E9Q238 1360 aa12.27□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Pip4k2bQ80XI4 416 aa12.27□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Dip2bQ3UH60 1574 aa12.26□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Asxl1P59598 1514 aa12.26□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Rgl3Q3UYI5 709 aa12.26□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Ipo9Q91YE6 1041 aa12.26□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Uggt2E9Q4X2 1504 aa12.26□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Cdk13Q69ZA1 1511 aaKnown RBP12.26□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Polr3aB2RXC6 1390 aa12.26□□□□□ -0.45
Tspan6-201ENSMUST00000087557 TprnA2AI08 749 aaKnown RBP12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Erich4Q3UNU4 136 aa12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Ccdc27Q3V036 639 aa12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Topbp1Q6ZQF0 1515 aa12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Setd1aE9PYH6 1716 aa12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Topaz1E5FYH1 1653 aa12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Upf2A2AT37 1269 aaKnown RBP12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 L3mbtl2P59178 703 aa12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Usp54Q8BL06 1588 aaKnown RBP12.25□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Rock1P70335 1354 aa12.24□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Trim35Q8C006 501 aa12.24□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Dot1lQ6XZL8 1540 aa12.24□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Knl1Q66JQ7 1612 aa12.23□□□□□ -0.45
Tspan6-201ENSMUST00000087557 RictorQ6QI06 1708 aa12.23□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Abca17E9PX95 1733 aa12.22□□□□□ -0.45
Tspan6-201ENSMUST00000087557 GphnQ8BUV3 769 aaKnown RBP12.22□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Ccdc9Q8VC31 543 aaKnown RBP12.22□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Tubgcp6G5E8P0 1769 aa12.22□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Scn4aQ9ER60 1841 aa12.21□□□□□ -0.45
Tspan6-201ENSMUST00000087557 TnikP83510 1323 aa12.21□□□□□ -0.45
Tspan6-201ENSMUST00000087557 Bcl9Q9D219 1425 aa12.2□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Anp32bQ9EST5 272 aaKnown RBP12.2□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Dip2aQ8BWT5 1523 aa12.2□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Cd109Q8R422 1442 aa12.2□□□□□ -0.46
Tspan6-201ENSMUST00000087557 SnphQ80U23 495 aa12.19□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Pcdhb17Q91VD8 799 aa12.19□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Hfm1D3Z4R1 1434 aa12.19□□□□□ -0.46
Tspan6-201ENSMUST00000087557 CrebzfQ91ZR3 358 aa12.18□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Med14A2ABV5 1459 aaKnown RBP12.18□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Atp7aQ64430 1491 aa12.18□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Abcc6Q9R1S7 1498 aa12.18□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Arhgap23Q69ZH9 1483 aa12.18□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Gpr37l1Q99JG2 481 aa12.18□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Robo2Q7TPD3 1470 aa12.17□□□□□ -0.46
Tspan6-201ENSMUST00000087557 1700006A11RikB9EHI3 544 aa12.17□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Ppip5k1A2ARP1 1436 aa12.17□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Kif1bQ60575 1816 aaKnown RBP12.16□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Prkrip1Q9CWV6 186 aaKnown RBP12.16□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Irx6Q9ER75 438 aa12.16□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Arid4bA2CG63 1314 aaKnown RBP12.16□□□□□ -0.46
Tspan6-201ENSMUST00000087557 ShprhQ7TPQ3 1674 aa12.15□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Zscan21Q07231 555 aa12.15□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Mak16Q8BGS0 296 aaKnown RBP12.15□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Erbb3Q61526 1339 aa12.15□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Tarbp1E9Q368 1579 aa12.15□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Fbxo41Q6NS60 873 aa12.15□□□□□ -0.46
Tspan6-201ENSMUST00000087557 Ttc41Q692V3 1318 aa12.14□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Myo5cE9Q1F5 1742 aa12.14□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Prex1Q69ZK0 1650 aa12.14□□□□□ -0.47
Tspan6-201ENSMUST00000087557 NeflP08551 543 aa12.13□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Slc4a3P16283 1227 aa12.13□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Bcl2l13P59017 434 aa12.13□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Rpgrip1lQ8CG73 1264 aa12.13□□□□□ -0.47
Tspan6-201ENSMUST00000087557 E2f4Q8R0K9 410 aa12.13□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Mbd3Q9Z2D8 285 aaKnown RBP12.13□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Erich6D3Z6S9 713 aa12.12□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Zfp444Q3TDV8 331 aaKnown RBP12.12□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Ciz1Q8VEH2 845 aa12.12□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Adamts7Q68SA9 1657 aa12.11□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Kcnh8P59111 1102 aa12.1□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Ttc21bQ0HA38 1315 aa12.1□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Edc4Q3UJB9 1406 aaKnown RBP12.1□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Tex14Q7M6U3 1450 aa12.1□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Fam117aQ7TNF9 451 aa12.1□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Zmym3Q9JLM4 1370 aa12.1□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Scaf11E9PZM7 1456 aaKnown RBP12.1□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Rimbp3Q3V0F0 1606 aa12.09□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Adamts13Q769J6 1426 aa12.09□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Nsd2Q8BVE8 1365 aa12.09□□□□□ -0.47
Tspan6-201ENSMUST00000087557 Ltbp4Q8K4G1 1666 aa12.08□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Adgrb3Q80ZF8 1522 aa12.08□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Sbno1Q689Z5 1390 aa12.08□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Ylpm1Q9R0I7 1386 aaKnown RBP12.08□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Akap12Q9WTQ5 1684 aa12.07□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Rims2Q9EQZ7 1530 aa12.07□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Hsp90aa1P07901 733 aaKnown RBP12.07□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Txndc2Q6P902 515 aa12.07□□□□□ -0.48
Tspan6-201ENSMUST00000087557 Phlpp1Q8CHE4 1687 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms