RNA–Protein interactions for RNA: ENSMUST00000028288.4

Notch1-201, Transcript of Neurogenic locus notch homolog protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Notch1, Length 9,488 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1-201ENSMUST00000028288 SkilQ60665 675 aa16.29■□□□□ 0.2
Notch1-201ENSMUST00000028288 Ccp110Q7TSH4 1004 aa16.29■□□□□ 0.2
Notch1-201ENSMUST00000028288 Naip1Q9QWK5 1403 aa16.29■□□□□ 0.2
Notch1-201ENSMUST00000028288 Ppp2r3aB2RXC8 1150 aa16.29■□□□□ 0.2
Notch1-201ENSMUST00000028288 Ccdc43Q9CR29 222 aaKnown RBP16.29■□□□□ 0.2
Notch1-201ENSMUST00000028288 Cfap65Q3V0B4 1847 aa16.28■□□□□ 0.2
Notch1-201ENSMUST00000028288 Nol12Q8BG17 217 aa16.28■□□□□ 0.2
Notch1-201ENSMUST00000028288 Pcf11G3X9Z4 1553 aa16.28■□□□□ 0.2
Notch1-201ENSMUST00000028288 Ccdc141E9Q8Q6 1531 aa16.28■□□□□ 0.2
Notch1-201ENSMUST00000028288 Usp48Q3V0C5 1052 aa16.28■□□□□ 0.2
Notch1-201ENSMUST00000028288 Kif3aP28741 701 aa16.28■□□□□ 0.2
Notch1-201ENSMUST00000028288 Sv2bQ8BG39 683 aa16.27■□□□□ 0.2
Notch1-201ENSMUST00000028288 Zfp444Q3TDV8 331 aaKnown RBP16.27■□□□□ 0.2
Notch1-201ENSMUST00000028288 Rufy1Q8BIJ7 712 aa16.27■□□□□ 0.2
Notch1-201ENSMUST00000028288 Cchcr1Q8K2I2 770 aa16.27■□□□□ 0.2
Notch1-201ENSMUST00000028288 Ccdc171E9Q1U1 1324 aa16.27■□□□□ 0.2
Notch1-201ENSMUST00000028288 Rnf214Q8BFU3 668 aaKnown RBP16.27■□□□□ 0.2
Notch1-201ENSMUST00000028288 Dhx16G3X8X0 1044 aaKnown RBP16.27■□□□□ 0.19
Notch1-201ENSMUST00000028288 PnisrA2AJT4 805 aaKnown RBP16.26■□□□□ 0.19
Notch1-201ENSMUST00000028288 Wdr78E9PYY5 807 aa16.26■□□□□ 0.19
Notch1-201ENSMUST00000028288 TchhA0A0B4J1F9 1599 aa16.26■□□□□ 0.19
Notch1-201ENSMUST00000028288 Map3k1P53349 1493 aa16.26■□□□□ 0.19
Notch1-201ENSMUST00000028288 Swt1Q9DBQ9 907 aa16.26■□□□□ 0.19
Notch1-201ENSMUST00000028288 Stk3Q9JI10 497 aa16.25■□□□□ 0.19
Notch1-201ENSMUST00000028288 Ipo4Q8VI75 1082 aa16.25■□□□□ 0.19
Notch1-201ENSMUST00000028288 Ubxn4Q8VCH8 506 aa16.25■□□□□ 0.19
Notch1-201ENSMUST00000028288 Cd109Q8R422 1442 aa16.25■□□□□ 0.19
Notch1-201ENSMUST00000028288 Odf2A3KGV1 830 aaKnown RBP16.25■□□□□ 0.19
Notch1-201ENSMUST00000028288 Myom3A2ABU4 1439 aa16.25■□□□□ 0.19
Notch1-201ENSMUST00000028288 Ttll5Q8CHB8 1328 aa16.25■□□□□ 0.19
Notch1-201ENSMUST00000028288 Q8C5K5 320 aa16.24■□□□□ 0.19
Notch1-201ENSMUST00000028288 Gsdma3Q5Y4Y6 464 aa16.24■□□□□ 0.19
Notch1-201ENSMUST00000028288 Zfp644E9QA22 1323 aa16.24■□□□□ 0.19
Notch1-201ENSMUST00000028288 FanciQ8K368 1330 aa16.24■□□□□ 0.19
Notch1-201ENSMUST00000028288 Psma5Q9Z2U1 241 aaKnown RBP16.23■□□□□ 0.19
Notch1-201ENSMUST00000028288 CrcpO35427 148 aa16.23■□□□□ 0.19
Notch1-201ENSMUST00000028288 NaspQ99MD9 773 aaKnown RBP16.23■□□□□ 0.19
Notch1-201ENSMUST00000028288 Ints3Q7TPD0 1041 aaKnown RBP16.23■□□□□ 0.19
Notch1-201ENSMUST00000028288 1700010I14RikQ7TPG0 532 aa16.22■□□□□ 0.19
Notch1-201ENSMUST00000028288 Tnpo1Q8BFY9 898 aaKnown RBP16.22■□□□□ 0.19
Notch1-201ENSMUST00000028288 AnlnQ8K298 1121 aaKnown RBP16.22■□□□□ 0.19
Notch1-201ENSMUST00000028288 Fam13bQ8K2H3 851 aa16.22■□□□□ 0.19
Notch1-201ENSMUST00000028288 Dusp9Q7TNL7 452 aa16.22■□□□□ 0.19
Notch1-201ENSMUST00000028288 Rad54l2Q99NG0 1466 aa16.21■□□□□ 0.19
Notch1-201ENSMUST00000028288 Fyb1O35601 819 aa16.21■□□□□ 0.19
Notch1-201ENSMUST00000028288 Cfap99A0A140LIX9 648 aa16.2■□□□□ 0.18
Notch1-201ENSMUST00000028288 Mphosph10Q810V0 681 aaKnown RBP16.2■□□□□ 0.18
Notch1-201ENSMUST00000028288 BcanQ61361 883 aa16.2■□□□□ 0.18
Notch1-201ENSMUST00000028288 NexnQ7TPW1 607 aa16.2■□□□□ 0.18
Notch1-201ENSMUST00000028288 Ppp2r1aQ76MZ3 589 aa16.2■□□□□ 0.18
Notch1-201ENSMUST00000028288 Cdkn1cP49919 348 aa16.2■□□□□ 0.18
Notch1-201ENSMUST00000028288 PdcQ9QW08 244 aa16.2■□□□□ 0.18
Notch1-201ENSMUST00000028288 Stk11ipQ3TAA7 1072 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 NrkQ9R0G8 1455 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Me1P06801 572 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Hdgfl1Q2VPR5 283 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Duox2A2AQ99 1517 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Mcm2P97310 904 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Bcl2l13P59017 434 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 HmmrQ00547 794 aaKnown RBP16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Rrp9Q91WM3 475 aaKnown RBP16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Cfdp1O88271 295 aaKnown RBP16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Mns1Q61884 491 aa16.19■□□□□ 0.18
Notch1-201ENSMUST00000028288 Gtf2f1Q3THK3 508 aaKnown RBP16.18■□□□□ 0.18
Notch1-201ENSMUST00000028288 Ncbp3Q8BZR9 615 aaKnown RBP16.18■□□□□ 0.18
Notch1-201ENSMUST00000028288 Cwc15Q9JHS9 229 aaKnown RBP16.17■□□□□ 0.18
Notch1-201ENSMUST00000028288 Slc4a2P13808 1237 aaKnown RBP16.17■□□□□ 0.18
Notch1-201ENSMUST00000028288 Puf60Q3UEB3 564 aaKnown RBP16.17■□□□□ 0.18
Notch1-201ENSMUST00000028288 Q7TT23 1179 aa16.17■□□□□ 0.18
Notch1-201ENSMUST00000028288 NexmifQ5DTT1 1515 aa16.17■□□□□ 0.18
Notch1-201ENSMUST00000028288 March6Q6ZQ89 909 aa16.17■□□□□ 0.18
Notch1-201ENSMUST00000028288 Nap1l1P28656 391 aaKnown RBP16.16■□□□□ 0.18
Notch1-201ENSMUST00000028288 Gm7298A0A0N4SVU1 1476 aa16.16■□□□□ 0.18
Notch1-201ENSMUST00000028288 Rbm10Q99KG3 930 aaKnown RBP16.16■□□□□ 0.18
Notch1-201ENSMUST00000028288 Trim29Q8R2Q0 587 aa16.15■□□□□ 0.18
Notch1-201ENSMUST00000028288 Sycp1Q62209 993 aa16.15■□□□□ 0.18
Notch1-201ENSMUST00000028288 Zkscan2G3X952 960 aa16.14■□□□□ 0.17
Notch1-201ENSMUST00000028288 Efcab5A0JP43 1406 aa16.14■□□□□ 0.17
Notch1-201ENSMUST00000028288 Cavin4A2AMM0 362 aa16.14■□□□□ 0.17
Notch1-201ENSMUST00000028288 Crocc2F6XLV1 1638 aa16.14■□□□□ 0.17
Notch1-201ENSMUST00000028288 Atp2b2Q9R0K7 1198 aa16.14■□□□□ 0.17
Notch1-201ENSMUST00000028288 Cep112Q5PR68 954 aa16.13■□□□□ 0.17
Notch1-201ENSMUST00000028288 Zkscan1Q8BGS3 561 aaKnown RBP16.13■□□□□ 0.17
Notch1-201ENSMUST00000028288 Grin2bQ01097 1482 aa16.13■□□□□ 0.17
Notch1-201ENSMUST00000028288 Asxl1P59598 1514 aa16.13■□□□□ 0.17
Notch1-201ENSMUST00000028288 Fmnl2A2APV2 1086 aa16.12■□□□□ 0.17
Notch1-201ENSMUST00000028288 Babam1Q3UI43 333 aa16.12■□□□□ 0.17
Notch1-201ENSMUST00000028288 Kcnh8P59111 1102 aa16.11■□□□□ 0.17
Notch1-201ENSMUST00000028288 Prm3Q62100 101 aa16.11■□□□□ 0.17
Notch1-201ENSMUST00000028288 Camsap1A2AHC3 1581 aa16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Chaf1aQ9QWF0 911 aa16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Dhx9O70133 1380 aaKnown RBP16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Eif4g1Q6NZJ6 1600 aaKnown RBP16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Gnai2P08752 355 aaKnown RBP16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Phf14Q9D4H9 881 aa16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Necab1Q8BG18 352 aa16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Cog6Q8R3I3 657 aa16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Urb2E9Q7L1 1524 aaKnown RBP16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Arhgap31A6X8Z5 1425 aa16.1■□□□□ 0.17
Notch1-201ENSMUST00000028288 Nop14Q8R3N1 860 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms